Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_F02_e590_12.seq
         (1557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   5.9  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 18/56 (32%), Positives = 18/56 (32%)
 Frame = -1

Query: 1551 GGXGXGXXGGXRGGVPRXXRPXGGGPPXPPXXRXXPXGGXRXGPXXPPPXFXGXPG 1384
            G  G     G RG      RP   G P P   R  P      G    PP F G  G
Sbjct: 588  GPLGPQGEKGDRGDSGLMGRPGNDGLPGPQGQRGLPGPQGEKGDQG-PPGFIGPKG 642


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
 Frame = -1

Query: 1527 GGXRGGVPRXXRP-XGGGPPXPPXXRXXPXGGXRXGPXXPP 1408
            GG  GG P+  RP     P   P     P G    G   PP
Sbjct: 306  GGAPGGPPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPP 346


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,185,724
Number of Sequences: 2352
Number of extensions: 20626
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 183284145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)