Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_F01_e582_11.seq
         (1502 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0254 + 16131779-16132475,16132609-16132768,16132944-161329...    30   4.1  
08_02_0880 + 22203440-22204324,22204763-22204876,22204964-222054...    30   4.1  
03_01_0156 - 1250251-1250436,1250633-1250674,1250794-1250835,125...    30   4.1  

>09_04_0254 + 16131779-16132475,16132609-16132768,16132944-16132992,
            16133158-16133271,16133434-16133958,16135538-16135969,
            16138882-16138956,16139530-16139625,16140610-16140725,
            16140822-16140992,16141080-16141239,16141328-16141513,
            16141624-16141752,16141837-16141915,16142034-16142143
          Length = 1032

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 368  HFHRPDWPEVASRLHYHLPNSRLG 297
            HF RP+W EV +R+    PNS +G
Sbjct: 974  HFARPNWKEVFTRIASKHPNSTVG 997


>08_02_0880 + 22203440-22204324,22204763-22204876,22204964-22205455,
            22205646-22205819,22206589-22206978,22209927-22210022,
            22210645-22210760,22210872-22211042,22211126-22211285,
            22211388-22211573,22211665-22211793,22211918-22211996,
            22212159-22212268
          Length = 1033

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 368  HFHRPDWPEVASRLHYHLPNSRLG 297
            HF RP+W EV +R+    PNS +G
Sbjct: 975  HFARPNWKEVFTRIASKHPNSTVG 998


>03_01_0156 -
           1250251-1250436,1250633-1250674,1250794-1250835,
           1250935-1251034,1251125-1251186,1251333-1251356
          Length = 151

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = +2

Query: 650 KGHDSDIIYRQLLQLREENTKLKSENGKLLDKC 748
           +G  + ++  Q+ +LRE+  KL+ +N +L +KC
Sbjct: 59  RGRKTKLLEEQVAKLREKEMKLRKDNEELREKC 91


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,819,648
Number of Sequences: 37544
Number of extensions: 474954
Number of successful extensions: 1096
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4814874820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)