Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_F01_e582_11.seq
         (1502 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025232-1|ABF17923.1|  993|Drosophila melanogaster FI01005p pro...    32   1.8  
AY122223-1|AAM52735.1|  993|Drosophila melanogaster RE21150p pro...    32   1.8  
AF289998-1|AAG02463.1|  993|Drosophila melanogaster thyroid horm...    32   1.8  
AE014296-1393|AAF50469.2|  993|Drosophila melanogaster CG7999-PA...    32   1.8  
AY118848-1|AAM50708.1|   92|Drosophila melanogaster GM15484p pro...    30   9.5  

>BT025232-1|ABF17923.1|  993|Drosophila melanogaster FI01005p
           protein.
          Length = 993

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +2

Query: 539 KCNRISSPLPGIASKLCPNQSQPVDISDDFIFKDKVYKGHDSDII 673
           +CN  S P+PG   KLC  +S   D+S  F+    + + + SD++
Sbjct: 473 QCNENSKPVPGDLGKLCVIRSTLFDVS--FLMLTSIVQTYGSDVV 515


>AY122223-1|AAM52735.1|  993|Drosophila melanogaster RE21150p
           protein.
          Length = 993

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +2

Query: 539 KCNRISSPLPGIASKLCPNQSQPVDISDDFIFKDKVYKGHDSDII 673
           +CN  S P+PG   KLC  +S   D+S  F+    + + + SD++
Sbjct: 473 QCNENSKPVPGDLGKLCVIRSTLFDVS--FLMLTSIVQTYGSDVV 515


>AF289998-1|AAG02463.1|  993|Drosophila melanogaster thyroid hormone
           receptor-associatedprotein TRAP100 protein.
          Length = 993

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +2

Query: 539 KCNRISSPLPGIASKLCPNQSQPVDISDDFIFKDKVYKGHDSDII 673
           +CN  S P+PG   KLC  +S   D+S  F+    + + + SD++
Sbjct: 473 QCNENSKPVPGDLGKLCVIRSTLFDVS--FLMLTSIVQTYGSDVV 515


>AE014296-1393|AAF50469.2|  993|Drosophila melanogaster CG7999-PA
           protein.
          Length = 993

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +2

Query: 539 KCNRISSPLPGIASKLCPNQSQPVDISDDFIFKDKVYKGHDSDII 673
           +CN  S P+PG   KLC  +S   D+S  F+    + + + SD++
Sbjct: 473 QCNENSKPVPGDLGKLCVIRSTLFDVS--FLMLTSIVQTYGSDVV 515


>AY118848-1|AAM50708.1|   92|Drosophila melanogaster GM15484p
           protein.
          Length = 92

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -2

Query: 439 LSAAGRRLHTYCVIWKL 389
           L+ + RRL+TYC IWKL
Sbjct: 31  LTPSARRLYTYCSIWKL 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,939,239
Number of Sequences: 53049
Number of extensions: 823192
Number of successful extensions: 2235
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2231
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8371863072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)