Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_E11_e661_09.seq
         (1574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     25   2.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   2.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   3.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       24   3.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   6.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   8.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   8.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   8.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   8.2  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 68  GTRIESAPGDENDD-NWLYGDSTGEHTEEKSQESREKE 178
           G R+E A  DE DD +   G ST    ++  +E+ +++
Sbjct: 172 GLRLEDANSDEQDDGDDGQGSSTNNDEDDDDEETGDRQ 209


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 68  GTRIESAPGDENDD-NWLYGDSTGEHTEEKSQESREKE 178
           G R+E A  DE DD +   G ST    ++  +E+ +++
Sbjct: 172 GLRLEDANSDEQDDGDDGQGSSTNNDEDDDDEETGDRQ 209


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 68  GTRIESAPGDENDD-NWLYGDSTGEHTEEKSQESREKE 178
           G R+E A  DE DD +   G ST    ++  +E+ +++
Sbjct: 172 GLRLEDANSDEQDDGDDGQGSSTNNDEDDDDEETGDRQ 209


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 548 EFNIDTIEDKPWNKPGADISGNDLNSFTPLIMFLINWQEL 667
           ++N D + D  W  PGA+  G  L+    L +FL    E+
Sbjct: 287 QYNFDGM-DIHWEYPGAEKMGGQLSDKEYLNLFLEELSEI 325


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 65  FGTRIESAPGDENDDNWLYGDSTGEHTEEKSQESREK 175
           FG  + S     N+  W     +   T E++ E REK
Sbjct: 100 FGNNLHSEKAKFNESKWQDSGESPGFTTERNWEIREK 136


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 83  IQSSCRIXCSPGDPLVXRAAAT 18
           ++S  R  C    P+V RAAAT
Sbjct: 168 LRSHFRALCQDDTPMVRRAAAT 189


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 147  RKNPRNLERKSQKKIPLLTLREMLRIRTXRM 239
            RK   NLER +QKK  + TL    + R  ++
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKRFAKL 1445


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 147  RKNPRNLERKSQKKIPLLTLREMLRIRTXRM 239
            RK   NLER +QKK  + TL    + R  ++
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKRFAKL 1445


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 147  RKNPRNLERKSQKKIPLLTLREMLRIRTXRM 239
            RK   NLER +QKK  + TL    + R  ++
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKRFAKL 1445


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 147  RKNPRNLERKSQKKIPLLTLREMLRIRTXRM 239
            RK   NLER +QKK  + TL    + R  ++
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKRFAKL 1445


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,479
Number of Sequences: 336
Number of extensions: 4787
Number of successful extensions: 37
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47525200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)