Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_E11_e661_09.seq
(1574 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 7e-07
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 31 0.017
SB_17652| Best HMM Match : Choline_kinase (HMM E-Value=4.5) 35 0.21
SB_28961| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.47
SB_57694| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 31 3.3
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 31 3.3
SB_16410| Best HMM Match : DUF1306 (HMM E-Value=5.7) 31 3.3
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 31 3.3
SB_39395| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_26279| Best HMM Match : S-antigen (HMM E-Value=3) 30 4.4
SB_20896| Best HMM Match : TSP_1 (HMM E-Value=4.8e-28) 30 4.4
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 30 5.8
SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.8
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.8
SB_57666| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.8
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.8
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 30 5.8
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 27 5.9
SB_12216| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.7
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 29 7.7
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 52.8 bits (121), Expect = 7e-07
Identities = 28/94 (29%), Positives = 44/94 (46%)
Frame = +2
Query: 326 DSQENGXXXXXXXXXVKVTIGEIKSGPQYTSLNIKRGVGLVATGGDKPRSGTTGGKVTLE 505
D +++ V+VTIGEI + V GG T G
Sbjct: 5 DEEDDDDDDDDDDDDVQVTIGEINTSATGYGAPYATPVNWNFKGGAAASKATPGAGSKTV 64
Query: 506 DLXGLGSINGVPXLEFNIDTIEDKPWNKPGADIS 607
D+ G++NGV E+++++ E+KPW +PGADI+
Sbjct: 65 DVNAEGTVNGVGIYEYDLESSEEKPWRQPGADIT 98
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 31.1 bits (67), Expect(2) = 0.017
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = -1
Query: 389 LQWSLSHHHCRQNLNPHFPDCPXHRFGPVH--HAQRPRNAHH*IENHRYFLRHPXGPYPQ 216
L ++ H H + + H P H H R R HH HR+ HP PY
Sbjct: 161 LSIAIIHRHRHHHHHHHHPSTIIIILRHRHRQHYNRHRRHHH-HHRHRHHHHHPNHPYSH 219
Query: 215 HLP 207
H P
Sbjct: 220 HYP 222
Score = 26.2 bits (55), Expect(2) = 0.017
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 137 HPSNHHITNYHRSHHLEQIQS 75
HP +HH N+HR ++Q+
Sbjct: 215 HPYSHHYPNHHRQQQQPRLQN 235
>SB_17652| Best HMM Match : Choline_kinase (HMM E-Value=4.5)
Length = 387
Score = 34.7 bits (76), Expect = 0.21
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 536 HHLYFPNHXSPQE*LFLQWFPNEVYHLQLPLIPHLFLYLNLYIVVPI*FLQ 384
HH +H SP E L ++P+ + HL LP HL+ + L V + LQ
Sbjct: 137 HHKNLGHHLSPVELLHKMYYPHSIGHLTLPDAQHLWNLIQLDEFVKLQLLQ 187
>SB_28961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 33.5 bits (73), Expect = 0.47
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2
Query: 61 PAARGIH*XLERPPPR 14
PAARGIH LERPPPR
Sbjct: 14 PAARGIHYVLERPPPR 29
>SB_57694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 38 LVDPPGCRXFGTRIESAPGDENDDNWLYGDSTGEHTEEKSQESREKE 178
LVDPPGCR P D+++D + TG+ ++ + + ++ E
Sbjct: 15 LVDPPGCRN-----SMDPNDQDEDTGDQDEDTGDQVQDPNDQDQDPE 56
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 30.7 bits (66), Expect = 3.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 522 PKPXKSSRVTFPPVVPERGLSPP 454
P+P SSR PPV P RG PP
Sbjct: 454 PRPASSSRGAPPPVPPSRGPPPP 476
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 30.7 bits (66), Expect = 3.3
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = +2
Query: 1232 PXXPYXXXSPTXPXPXLXXWXXPXCPAXSXPXXPPXLXXPXSXXPFSRLXPPXSXLPXXP 1411
P P P P P + P P S P PP P P L PP +P P
Sbjct: 245 PPMPETPLPPATPNPFIP----PASPNPSIPPAPPNPSIPAPPNPSIPLAPPNPYIPPAP 300
>SB_16410| Best HMM Match : DUF1306 (HMM E-Value=5.7)
Length = 396
Score = 30.7 bits (66), Expect = 3.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 356 QNLNPHFPDCPXHRFGPVHHAQRPRN 279
QNL P PD P H P H A PRN
Sbjct: 124 QNLRPRLPDAPRHDDRPQHRAS-PRN 148
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 30.7 bits (66), Expect = 3.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 522 PKPXKSSRVTFPPVVPERGLSPP 454
P+P SSR PPV P RG PP
Sbjct: 366 PRPASSSRGAPPPVPPSRGPPPP 388
>SB_39395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 30.7 bits (66), Expect = 3.3
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -1
Query: 107 HRSHHLEQIQSSCRIXCSPGDPLV 36
HRSH ++I+S+ CSPGDPLV
Sbjct: 2 HRSHMEDEIRSN---SCSPGDPLV 22
>SB_26279| Best HMM Match : S-antigen (HMM E-Value=3)
Length = 613
Score = 30.3 bits (65), Expect = 4.4
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Frame = -1
Query: 467 VYHLQLPLIPHLFLY--LNLY-IVVPI*--FLQW-SLSHHHCRQNLNPHFPDCPXHRFGP 306
VYH+ LP H LN+Y ++P F Q +S +H + HF CP
Sbjct: 51 VYHVMLPFHTHFTQCPDLNVYHAMLPFHTHFTQCPDISEYHAMLTFHTHFTQCPDF---S 107
Query: 305 VHHAQRPRNAHH*IENHRYFLRHPXGPYPQHLPQC 201
+HA P + H + + H P+ H QC
Sbjct: 108 EYHAMLPFHTHF-TQCPDFSEYHVMLPFHTHFTQC 141
>SB_20896| Best HMM Match : TSP_1 (HMM E-Value=4.8e-28)
Length = 588
Score = 30.3 bits (65), Expect = 4.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 174 FSLDSWDFSSVCSPVESPYNQLSSFSSP 91
F+L +WD + +C+P SPYN S + P
Sbjct: 463 FNLKTWDNNFLCTPKNSPYNLEWSRTGP 490
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 29.9 bits (64), Expect = 5.8
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = -1
Query: 446 LIPHLFLYLNLYIVVPI*FLQWSLSHHHCRQNLNPHFPDCPXHRFGPVHHAQRPRNAHH* 267
+IP + + + + I++ I ++ HHH R+ + H+ H+F HH N H+
Sbjct: 1008 IIPIIIIVIIVIIIITIIITIFNHYHHHRRR--HHHYHHQQQHQFHH-HHHHTHYNYHY- 1063
Query: 266 IENHRYFLRHPXG-PYPQHL 210
H + P P+P+H+
Sbjct: 1064 --RHFLIIDRPGNKPFPKHV 1081
>SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1551
Score = 29.9 bits (64), Expect = 5.8
Identities = 16/88 (18%), Positives = 33/88 (37%)
Frame = +2
Query: 77 IESAPGDENDDNWLYGDSTGEHTEEKSQESREKEPEKNTAVDTAXXXXXXXXXXXXXXXX 256
++ E + +++YG G +EK + S E + + + +
Sbjct: 571 LKEESSSEEEPDFVYGRQVGYAPDEKEEASSESDVSLDQQEEASDELDGAPDQQEGTAGE 630
Query: 257 XSQFNDEHFADVGRDEQDQNGXADSQEN 340
+ +E + +Q + G DSQEN
Sbjct: 631 LDEAIEEQAERASQQQQGEQGDRDSQEN 658
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 29.9 bits (64), Expect = 5.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 380 TIGEIKSGPQYTSLNIKRGVGLVATGGDKPRSGTTGGKVTLEDLXGLGSIN 532
T G + SG T+ + G G TGG SGTT G+V G +N
Sbjct: 591 TTGGVNSGSGTTTSGVNTGSG-TTTGGVNTGSGTTTGEVNTGSGTTTGGMN 640
>SB_57666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 5.8
Identities = 16/88 (18%), Positives = 33/88 (37%)
Frame = +2
Query: 77 IESAPGDENDDNWLYGDSTGEHTEEKSQESREKEPEKNTAVDTAXXXXXXXXXXXXXXXX 256
++ E + +++YG G +EK + S E + + + +
Sbjct: 198 LKEESSSEEEPDFVYGRQVGYAPDEKEEASSESDVSLDQQEEASDELDGAPDQQEGTAGE 257
Query: 257 XSQFNDEHFADVGRDEQDQNGXADSQEN 340
+ +E + +Q + G DSQEN
Sbjct: 258 LDEAIEEQAERASQQQQGEQGDRDSQEN 285
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.9 bits (64), Expect = 5.8
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +3
Query: 1230 PPXXPTXXXPPPXRXLXSXPGXXXXAPRXXXPXXPXXXXHPPPXXXFRACXPP 1388
PP P PPP P PR P P PPP + PP
Sbjct: 373 PPGEPYARMPPPGATHPRVPSPGASHPRVPPPGAPHPRV-PPPGASHQRVRPP 424
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 29.9 bits (64), Expect = 5.8
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -1
Query: 371 HHHCRQNLNPHFPDCPXHRFGPVHHAQRPRNAHH*IENHRYFLRH 237
HHH R + + H HR H R R+ HH +H Y RH
Sbjct: 312 HHHHRHHHHHHHHHHQRHR-----HRHRHRHRHHHHHHHEYNRRH 351
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 27.1 bits (57), Expect(2) = 5.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 326 PXHRFGPVHHAQRPRNAHH*IENHRY 249
P HR+ HH Q + HH NH +
Sbjct: 41 PRHRYHHHHHHQHNHHQHHHHHNHHH 66
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = -1
Query: 137 HPSNHHITNYHRSHH 93
H +HH +H HH
Sbjct: 62 HNHHHHHQQHHHHHH 76
>SB_12216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2992
Score = 29.5 bits (63), Expect = 7.7
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 533 GVPXLEFNIDTIEDKPWNKPGADISGNDLNS 625
GVP L FNI T +D P P ++I+ N+++S
Sbjct: 1670 GVPSLAFNITTAQDVPAASP-SNITANNVSS 1699
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 29.5 bits (63), Expect = 7.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 146 QYVHPSNHHITNYHRSHHL 90
QY NH IT+YH HHL
Sbjct: 829 QYYPDRNHGITDYHAKHHL 847
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,729,545
Number of Sequences: 59808
Number of extensions: 581786
Number of successful extensions: 3262
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3213
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5152884103
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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