Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_E11_e661_09.seq
(1574 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S. cerevis... 78 1e-13
BC017724-1|AAH17724.1| 378|Homo sapiens FIP1L1 protein protein. 78 1e-13
AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processi... 78 1e-13
AY229892-1|AAP69563.1| 849|Homo sapiens FIP1L1/PDGFRA fusion pr... 78 1e-13
BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein. 77 1e-13
BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein. 77 1e-13
>BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S.
cerevisiae) protein.
Length = 594
Score = 77.8 bits (183), Expect = 1e-13
Identities = 57/180 (31%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Frame = +2
Query: 71 TRIESAPGDENDDNWLYGDSTGEHTEEKSQESREKEPEKNTAVDTAXXXXXXXXXXXXXX 250
+ + G + ++ WLYG H + ++ + + A
Sbjct: 11 SELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANPPSGIEDETAE 70
Query: 251 XXXSQFNDEHFADVGRDEQDQNGXADSQENGXXXXXXXXXVKVTIGEIKSG-PQYTSLNI 427
N V E D + +D E+ V VTIG+IK+G PQY S
Sbjct: 71 ------NGVPKPKVTETEDDSDSDSDDDEDD---------VHVTIGDIKTGAPQYGSYGT 115
Query: 428 KRGVGLVATGGDKPRSGTTGGKVTLEDLXGLGSINGVPXLEFNIDTIEDKPWNKPGADIS 607
+ TGG GTTG KV DL GSINGVP LE ++D+ EDKPW KPGAD+S
Sbjct: 116 APVNLNIKTGGRV--YGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLS 173
>BC017724-1|AAH17724.1| 378|Homo sapiens FIP1L1 protein protein.
Length = 378
Score = 77.8 bits (183), Expect = 1e-13
Identities = 61/180 (33%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Frame = +2
Query: 71 TRIESAPGDENDDNWLYGDSTGEHTEEKSQESREKEPEKNTAVDTAXXXXXXXXXXXXXX 250
+ + G + ++ WLYGD E +E+ P +TA
Sbjct: 11 SELSGGTGGDEEEEWLYGDEN--EVERPEEENASANPPSGIEDETAE------------- 55
Query: 251 XXXSQFNDEHFADVGRDEQDQNGXADSQENGXXXXXXXXXVKVTIGEIKSG-PQYTSLNI 427
N V E D + +D E+ V VTIG+IK+G PQY S
Sbjct: 56 ------NGVPKPKVTETEDDSDSDSDDDEDD---------VHVTIGDIKTGAPQYGSYGT 100
Query: 428 KRGVGLVATGGDKPRSGTTGGKVTLEDLXGLGSINGVPXLEFNIDTIEDKPWNKPGADIS 607
+ TGG GTTG KV DL GSINGVP LE ++D+ EDKPW KPGAD+S
Sbjct: 101 APVNLNIKTGGRV--YGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLS 158
>AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processing
factor FIP1 protein.
Length = 594
Score = 77.8 bits (183), Expect = 1e-13
Identities = 57/180 (31%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Frame = +2
Query: 71 TRIESAPGDENDDNWLYGDSTGEHTEEKSQESREKEPEKNTAVDTAXXXXXXXXXXXXXX 250
+ + G + ++ WLYG H + ++ + + A
Sbjct: 11 SELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANPPSGIEDETAE 70
Query: 251 XXXSQFNDEHFADVGRDEQDQNGXADSQENGXXXXXXXXXVKVTIGEIKSG-PQYTSLNI 427
N V E D + +D E+ V VTIG+IK+G PQY S
Sbjct: 71 ------NGVPKPKVTETEDDSDSDSDDDEDD---------VHVTIGDIKTGAPQYGSYGT 115
Query: 428 KRGVGLVATGGDKPRSGTTGGKVTLEDLXGLGSINGVPXLEFNIDTIEDKPWNKPGADIS 607
+ TGG GTTG KV DL GSINGVP LE ++D+ EDKPW KPGAD+S
Sbjct: 116 APVNLNIKTGGRV--YGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLS 173
>AY229892-1|AAP69563.1| 849|Homo sapiens FIP1L1/PDGFRA fusion
protein protein.
Length = 849
Score = 77.8 bits (183), Expect = 1e-13
Identities = 57/180 (31%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Frame = +2
Query: 71 TRIESAPGDENDDNWLYGDSTGEHTEEKSQESREKEPEKNTAVDTAXXXXXXXXXXXXXX 250
+ + G + ++ WLYG H + ++ + + A
Sbjct: 11 SELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANPPSGIEDETAE 70
Query: 251 XXXSQFNDEHFADVGRDEQDQNGXADSQENGXXXXXXXXXVKVTIGEIKSG-PQYTSLNI 427
N V E D + +D E+ V VTIG+IK+G PQY S
Sbjct: 71 ------NGVPKPKVTETEDDSDSDSDDDEDD---------VHVTIGDIKTGAPQYGSYGT 115
Query: 428 KRGVGLVATGGDKPRSGTTGGKVTLEDLXGLGSINGVPXLEFNIDTIEDKPWNKPGADIS 607
+ TGG GTTG KV DL GSINGVP LE ++D+ EDKPW KPGAD+S
Sbjct: 116 APVNLNIKTGGRV--YGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLS 173
>BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 77.4 bits (182), Expect = 1e-13
Identities = 44/80 (55%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +2
Query: 371 VKVTIGEIKSG-PQYTSLNIKRGVGLVATGGDKPRSGTTGGKVTLEDLXGLGSINGVPXL 547
V VTIG+IK+G PQY S + TGG GTTG KV DL GSINGVP L
Sbjct: 84 VHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRV--YGTTGTKVKGVDLDAPGSINGVPLL 141
Query: 548 EFNIDTIEDKPWNKPGADIS 607
E ++D+ EDKPW KPGAD+S
Sbjct: 142 EVDLDSFEDKPWRKPGADLS 161
>BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 77.4 bits (182), Expect = 1e-13
Identities = 44/80 (55%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +2
Query: 371 VKVTIGEIKSG-PQYTSLNIKRGVGLVATGGDKPRSGTTGGKVTLEDLXGLGSINGVPXL 547
V VTIG+IK+G PQY S + TGG GTTG KV DL GSINGVP L
Sbjct: 84 VHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRV--YGTTGTKVKGVDLDAPGSINGVPLL 141
Query: 548 EFNIDTIEDKPWNKPGADIS 607
E ++D+ EDKPW KPGAD+S
Sbjct: 142 EVDLDSFEDKPWRKPGADLS 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,754,207
Number of Sequences: 237096
Number of extensions: 3156666
Number of successful extensions: 8202
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8092
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23465976340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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