BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030731E7_E11_e661_09.seq (1574 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 1.8 AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 2.4 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 3.1 DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 9.5 DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 9.5 DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 9.5 DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 9.5 AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 9.5 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 9.5 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 9.5 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 9.5 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 9.5 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 9.5 AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 9.5 >AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. Length = 554 Score = 25.0 bits (52), Expect = 1.8 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -1 Query: 158 GIFPQYVHPSNHHITNYH 105 G P HP HH + YH Sbjct: 310 GFLPPSYHPHQHHPSQYH 327 >AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex determiner protein. Length = 425 Score = 24.6 bits (51), Expect = 2.4 Identities = 7/22 (31%), Positives = 16/22 (72%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + ++++ R KEP+ Sbjct: 292 YGETSKERSRDRTERERSKEPK 313 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 24.2 bits (50), Expect = 3.1 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = -3 Query: 522 PKPXKSSRVTFPPVVPERGLSPPVATNPTPLF 427 P+P KSS + +P+ LS + + P P F Sbjct: 353 PEPPKSSESSTGSSIPKLNLSTALMSQPPPNF 384 >DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 22.6 bits (46), Expect = 9.5 Identities = 6/22 (27%), Positives = 15/22 (68%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + +++ + KEP+ Sbjct: 59 YGETSKERSRNRTEREKSKEPK 80 >DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 22.6 bits (46), Expect = 9.5 Identities = 6/22 (27%), Positives = 15/22 (68%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + +++ + KEP+ Sbjct: 59 YGETSKERSRNRTEREKSKEPK 80 >DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 22.6 bits (46), Expect = 9.5 Identities = 6/22 (27%), Positives = 15/22 (68%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + +++ + KEP+ Sbjct: 59 YGETSKERSRNRTEREKSKEPK 80 >DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 22.6 bits (46), Expect = 9.5 Identities = 6/22 (27%), Positives = 15/22 (68%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + +++ + KEP+ Sbjct: 59 YGETSKERSRNRTEREKSKEPK 80 >AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 22.6 bits (46), Expect = 9.5 Identities = 6/22 (27%), Positives = 15/22 (68%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + +++ + KEP+ Sbjct: 292 YGETSKERSRNRTEREKSKEPK 313 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.6 bits (46), Expect = 9.5 Identities = 6/22 (27%), Positives = 15/22 (68%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + +++ + KEP+ Sbjct: 292 YGETSKERSRNRTEREKSKEPK 313 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.6 bits (46), Expect = 9.5 Identities = 6/22 (27%), Positives = 15/22 (68%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + +++ + KEP+ Sbjct: 292 YGETSKERSRNRTEREKSKEPK 313 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.6 bits (46), Expect = 9.5 Identities = 6/22 (27%), Positives = 15/22 (68%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + +++ + KEP+ Sbjct: 292 YGETSKERSRNRTEREKSKEPK 313 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.6 bits (46), Expect = 9.5 Identities = 6/22 (27%), Positives = 15/22 (68%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + +++ + KEP+ Sbjct: 292 YGETSKERSRNRTEREKSKEPK 313 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 22.6 bits (46), Expect = 9.5 Identities = 6/22 (27%), Positives = 15/22 (68%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG+++ E + +++ + KEP+ Sbjct: 281 YGETSKERSRNRTEREKSKEPK 302 >AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 22.6 bits (46), Expect = 9.5 Identities = 7/22 (31%), Positives = 14/22 (63%) Frame = +2 Query: 119 YGDSTGEHTEEKSQESREKEPE 184 YG ++ E + ++ + R KEP+ Sbjct: 281 YGKTSKERSRDRMERERSKEPK 302 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 306,073 Number of Sequences: 438 Number of extensions: 7697 Number of successful extensions: 26 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 26 length of database: 146,343 effective HSP length: 61 effective length of database: 119,625 effective search space used: 55386375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -