Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_E09_e645_09.seq
(1518 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 62 1e-09
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 61 3e-09
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 61 3e-09
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 61 3e-09
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 61 3e-09
12_02_1282 + 27528159-27529148,27529549-27529614 60 3e-09
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 60 3e-09
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 60 3e-09
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 60 6e-09
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 60 6e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 36 0.11
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 31 2.4
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/122 (36%), Positives = 52/122 (42%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 15 GTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGM-GQKDAYVGDEAQSKRGILTLKYPI 73
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQH 557
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +
Sbjct: 74 EH-GIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-N 130
Query: 558 TP 563
TP
Sbjct: 131 TP 132
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 60.9 bits (141), Expect = 3e-09
Identities = 43/117 (36%), Positives = 49/117 (41%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 15 GTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGM-GQKDAYVGDEAQSKRGILTLKYPI 73
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFET 548
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET
Sbjct: 74 EH-GIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFET 128
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 60.9 bits (141), Expect = 3e-09
Identities = 43/117 (36%), Positives = 49/117 (41%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 15 GTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGM-GQKDAYVGDEAQSKRGILTLKYPI 73
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFET 548
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET
Sbjct: 74 EH-GIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM-TQIMFET 128
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 60.9 bits (141), Expect = 3e-09
Identities = 43/117 (36%), Positives = 49/117 (41%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 15 GTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGM-GQKDAYVGDEAQSKRGILTLKYPI 73
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFET 548
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET
Sbjct: 74 EH-GIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFET 128
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 60.9 bits (141), Expect = 3e-09
Identities = 43/117 (36%), Positives = 49/117 (41%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 15 GTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGM-GQKDAYVGDEAQSKRGILTLKYPI 73
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFET 548
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET
Sbjct: 74 EH-GIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFET 128
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 60.5 bits (140), Expect = 3e-09
Identities = 31/49 (63%), Positives = 34/49 (69%)
Frame = +3
Query: 402 WDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFET 548
WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET
Sbjct: 81 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFET 128
Score = 41.9 bits (94), Expect = 0.001
Identities = 29/64 (45%), Positives = 33/64 (51%)
Frame = +2
Query: 197 GSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHSXRTGMLTLXYP 376
G+ M K G GDDA AVF S+ G + VM MG S R G+LTL YP
Sbjct: 15 GTGMVKAGFAGDDAPRAVFPSIV-GRPRHTGVMVGMGQKDAYVGDEAQSKR-GILTLKYP 72
Query: 377 IEHG 388
IEHG
Sbjct: 73 IEHG 76
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 60.5 bits (140), Expect = 3e-09
Identities = 43/117 (36%), Positives = 49/117 (41%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG A +
Sbjct: 14 GTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGM-GQKDAYVGDEAQAKRGILTLKYPI 72
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFET 548
+ WDD E I H+TF NEL VA E+HP LLTEA LN KA E T ++FET
Sbjct: 73 EH-GIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREKM-TQIMFET 127
Score = 44.4 bits (100), Expect = 2e-04
Identities = 31/76 (40%), Positives = 38/76 (50%)
Frame = +2
Query: 161 ADEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRH 340
ADE+ + G+ M K G GDDA AVF S+ G + VM MG
Sbjct: 2 ADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIV-GRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 341 SXRTGMLTLXYPIEHG 388
+ R G+LTL YPIEHG
Sbjct: 61 AKR-GILTLKYPIEHG 75
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 60.5 bits (140), Expect = 3e-09
Identities = 31/49 (63%), Positives = 34/49 (69%)
Frame = +3
Query: 402 WDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFET 548
WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET
Sbjct: 81 WDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM-TQIMFET 128
Score = 41.9 bits (94), Expect = 0.001
Identities = 29/64 (45%), Positives = 33/64 (51%)
Frame = +2
Query: 197 GSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHSXRTGMLTLXYP 376
G+ M K G GDDA AVF S+ G + VM MG S R G+LTL YP
Sbjct: 15 GTGMVKAGFAGDDAPRAVFPSIV-GRPRHTGVMVGMGQKDAYVGDEAQSKR-GILTLKYP 72
Query: 377 IEHG 388
IEHG
Sbjct: 73 IEHG 76
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 59.7 bits (138), Expect = 6e-09
Identities = 42/117 (35%), Positives = 49/117 (41%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 15 GTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGM-GQKDAYVGDEAQSKRGILTLKYPI 73
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFET 548
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FE+
Sbjct: 74 EH-GIVSNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPKANREKM-TQIMFES 128
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 59.7 bits (138), Expect = 6e-09
Identities = 30/49 (61%), Positives = 34/49 (69%)
Frame = +3
Query: 402 WDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFET 548
WDD E I H+TF NEL VA EEHP LLTEA +N KA E T ++FET
Sbjct: 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKM-TQIMFET 127
Score = 44.0 bits (99), Expect = 3e-04
Identities = 31/76 (40%), Positives = 38/76 (50%)
Frame = +2
Query: 161 ADEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRH 340
A+E+ + G+ M K G GDDA AVF S+ G + VM MG
Sbjct: 2 AEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIV-GRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 341 SXRTGMLTLXYPIEHG 388
S R G+LTL YPIEHG
Sbjct: 61 SKR-GILTLKYPIEHG 75
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 35.5 bits (78), Expect = 0.11
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 167 EEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLS---WGDL 277
+E + ++ GS CK G GDD AVF SL+ WG+L
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSLTDLYWGNL 44
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 402 WDDXEXIXHYTFXNELXVATEEHPXLLTEAALN 500
WD + I ++ F L + EEHP L+ E + N
Sbjct: 146 WDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTN 178
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 402 WDDXEXIXHYTFXNELXVATEEHPXLLTEAALN 500
WD + I ++ F L + EEHP L+ E + N
Sbjct: 101 WDIVDNIWNHAFRQRLLINPEEHPMLIVEPSTN 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,856,989
Number of Sequences: 37544
Number of extensions: 175346
Number of successful extensions: 175
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4872885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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