Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_E09_e645_09.seq
(1518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 62 1e-09
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 62 1e-09
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 62 1e-09
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 62 1e-09
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 62 1e-09
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 62 1e-09
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 62 1e-09
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 62 1e-09
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 61 2e-09
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 61 2e-09
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 60 4e-09
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 54 2e-07
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 54 2e-07
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 53 5e-07
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 53 5e-07
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 36 0.057
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 32 1.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/122 (36%), Positives = 52/122 (42%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKRGILTLKYPI 72
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQH 557
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +
Sbjct: 73 EH-GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-N 129
Query: 558 TP 563
TP
Sbjct: 130 TP 131
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D+E A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/122 (36%), Positives = 52/122 (42%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKRGILTLKYPI 72
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQH 557
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +
Sbjct: 73 EH-GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-N 129
Query: 558 TP 563
TP
Sbjct: 130 TP 131
Score = 53.2 bits (122), Expect = 5e-07
Identities = 35/78 (44%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D++ A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/122 (36%), Positives = 52/122 (42%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKRGILTLKYPI 72
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQH 557
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +
Sbjct: 73 EH-GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-N 129
Query: 558 TP 563
TP
Sbjct: 130 TP 131
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D+E A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/122 (36%), Positives = 52/122 (42%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKRGILTLKYPI 72
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQH 557
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +
Sbjct: 73 EH-GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-N 129
Query: 558 TP 563
TP
Sbjct: 130 TP 131
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D+E A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/122 (36%), Positives = 52/122 (42%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKRGILTLKYPI 72
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQH 557
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +
Sbjct: 73 EH-GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-N 129
Query: 558 TP 563
TP
Sbjct: 130 TP 131
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D+E A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/122 (36%), Positives = 52/122 (42%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKRGILTLKYPI 72
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQH 557
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +
Sbjct: 73 EH-GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-N 129
Query: 558 TP 563
TP
Sbjct: 130 TP 131
Score = 52.4 bits (120), Expect = 8e-07
Identities = 35/78 (44%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D++ A I+ GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/122 (36%), Positives = 52/122 (42%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKRGILTLKYPI 72
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQH 557
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +
Sbjct: 73 EH-GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-N 129
Query: 558 TP 563
TP
Sbjct: 130 TP 131
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D+E A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 61.7 bits (143), Expect = 1e-09
Identities = 45/122 (36%), Positives = 52/122 (42%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKRGILTLKYPI 72
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQH 557
+ WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +
Sbjct: 73 EH-GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-N 129
Query: 558 TP 563
TP
Sbjct: 130 TP 131
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D+E A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/54 (61%), Positives = 37/54 (68%)
Frame = +3
Query: 402 WDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQHTP 563
WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +TP
Sbjct: 36 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-NTP 87
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 61.3 bits (142), Expect = 2e-09
Identities = 33/54 (61%), Positives = 37/54 (68%)
Frame = +3
Query: 402 WDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQHTP 563
WDD E I H+TF NEL VA EEHP LLTEA LN KA E T ++FET +TP
Sbjct: 66 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM-TQIMFETF-NTP 117
Score = 37.1 bits (82), Expect = 0.033
Identities = 27/62 (43%), Positives = 30/62 (48%)
Frame = +2
Query: 212 KXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHSXRTGMLTLXYPIEHGX 391
+ G GDDA AVF S+ G VM MG S R G+LTL YPIEHG
Sbjct: 5 RAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGI 62
Query: 392 XT 397
T
Sbjct: 63 VT 64
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 60.1 bits (139), Expect = 4e-09
Identities = 43/122 (35%), Positives = 52/122 (42%)
Frame = +3
Query: 198 GPECAKXGXXETTLPSPYFPXYRGATXSPAAXXXXWXTKDXYVG**GTAAGRVCXHSXTX 377
G K G P FP G KD YVG + +
Sbjct: 13 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM-GQKDSYVGDEAQSKRGILTLKYPI 71
Query: 378 SNTAXXPXWDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQH 557
+ WDD E I H+TF NEL +A EEHP LLTEA LN K+ E T ++FET +
Sbjct: 72 EH-GIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKM-TQIMFETF-N 128
Query: 558 TP 563
TP
Sbjct: 129 TP 130
Score = 54.0 bits (124), Expect = 3e-07
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
+EE A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 61 KR-GILTLKYPIEHGIVT 77
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D+E A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D+E A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 53.2 bits (122), Expect = 5e-07
Identities = 35/78 (44%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D++ A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 53.2 bits (122), Expect = 5e-07
Identities = 35/78 (44%), Positives = 40/78 (51%)
Frame = +2
Query: 164 DEEXAXXIVYYGSXMCKXGXXGDDAXLAVFSSLSWGDLXTSXVMXXMGH*GLLRRLMRHS 343
D++ A +V GS MCK G GDDA AVF S+ G VM MG S
Sbjct: 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV-GRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 344 XRTGMLTLXYPIEHGXXT 397
R G+LTL YPIEHG T
Sbjct: 62 KR-GILTLKYPIEHGIVT 78
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 36.3 bits (80), Expect = 0.057
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 402 WDDXEXIXHYTFX-NELXVATEEHPXLLTEAALN 500
W D E I Y F ++L + EEHP LLT+A LN
Sbjct: 82 WSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLN 115
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 402 WDDXEXIXHYTFXNELXVATEEHPXLLTEAALNXKAFXEXXDT*LLFETLQ 554
W+ E I +++ N L EHP L +E++ N +A E T ++FE Q
Sbjct: 102 WELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKL-TEIMFEKFQ 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,389,355
Number of Sequences: 27780
Number of extensions: 129196
Number of successful extensions: 149
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4359137160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -