Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_E06_e621_10.seq
         (1496 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    27   1.1  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    27   1.9  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 84  CPVCYEIPSGQIFQCNEGHHVCDQCK 161
           CPV  +IP  + F+C E  H    CK
Sbjct: 407 CPVKIQIPKRRCFKCWETGHFSRDCK 432


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 84  CPVCYEIPSGQIFQCNEGHHVCDQC 158
           CPV   IPS + ++C +  H+   C
Sbjct: 420 CPVRINIPSRRCYRCWQTDHISQDC 444


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,265
Number of Sequences: 2352
Number of extensions: 7632
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 175156245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)