Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_E06_e621_10.seq
(1496 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g37910.1 68418.m04567 seven in absentia (SINA) family protein... 47 3e-05
At5g37890.1 68418.m04565 seven in absentia (SINA) protein, putat... 47 3e-05
At1g66620.1 68414.m07570 seven in absentia (SINA) protein, putat... 47 3e-05
At3g58040.1 68416.m06470 seven in absentia (SINA) family protein... 47 4e-05
At2g41980.1 68415.m05193 seven in absentia (SINA) family protein... 47 4e-05
At5g37870.1 68418.m04561 seven in absentia (SINA) family protein... 46 6e-05
At1g66610.1 68414.m07569 seven in absentia (SINA) protein, putat... 46 9e-05
At4g27880.1 68417.m04002 seven in absentia (SINA) family protein... 44 2e-04
At1g66650.1 68414.m07573 seven in absentia (SINA) protein, putat... 44 2e-04
At3g61790.1 68416.m06933 seven in absentia (SINA) family protein... 44 3e-04
At1g66630.1 68414.m07571 seven in absentia (SINA) family protein... 43 5e-04
At5g62800.1 68418.m07883 seven in absentia (SINA) family protein... 42 8e-04
At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99... 41 0.002
At5g37930.1 68418.m04569 seven in absentia (SINA) family protein... 41 0.002
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 37 0.039
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 37 0.039
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 37 0.039
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 37 0.039
At5g63970.1 68418.m08032 copine-related low similarity to SP|Q99... 35 0.12
At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99... 32 0.85
At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99... 32 0.85
At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99... 32 0.85
At1g30420.1 68414.m03718 ATP-binding cassette transport protein,... 32 0.85
At1g30410.1 68414.m03717 ATP-binding cassette transport protein,... 31 1.5
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 30 3.4
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 29 6.0
At1g79380.1 68414.m09251 copine-related low similarity to SP|Q99... 29 7.9
At1g55440.1 68414.m06341 DC1 domain-containing protein contains ... 29 7.9
>At5g37910.1 68418.m04567 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 276
Score = 47.2 bits (107), Expect = 3e-05
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 DLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRL-DVCPXRRALFFGTRNYAMEELIANV 245
D+L CP+C E + IFQC+ GH C C +L + CP +R+ AME ++ ++
Sbjct: 34 DILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESI 92
>At5g37890.1 68418.m04565 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 286
Score = 47.2 bits (107), Expect = 3e-05
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 ELKDSLRXARRTVVKPGALPDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRL-DVC 179
+L S R + L DL+ +L CP+CYE + IFQC+ GH C C +L + C
Sbjct: 25 QLSSSDAAKRDAKKRSTMLMDLE-ILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKC 83
Query: 180 PXRRALFFGTRNYAMEELIANV 245
P + R AME ++ ++
Sbjct: 84 PACTSPVGHNRCRAMESVLESI 105
>At1g66620.1 68414.m07570 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 313
Score = 47.2 bits (107), Expect = 3e-05
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 39 VVKPGALPDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRL-DVCPXRRALFFGTRN 215
V + G L +LD LL CP+C + IFQC+ GH C C +L + CP R+
Sbjct: 30 VARSGTLFELD-LLDCPICCHALTSPIFQCDNGHIACSSCCTKLRNKCPSCALPIGNFRS 88
Query: 216 YAMEELIANV 245
ME ++ V
Sbjct: 89 RIMERVVEAV 98
>At3g58040.1 68416.m06470 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 308
Score = 46.8 bits (106), Expect = 4e-05
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 72 DLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRL-DVCPXRRALFFGTRNYAMEEL 233
+LL+CPVC + I QC GH +C CK+R+ + CP R R A+E++
Sbjct: 56 ELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKV 110
>At2g41980.1 68415.m05193 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 305
Score = 46.8 bits (106), Expect = 4e-05
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 72 DLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRL-DVCPXRRALFFGTRNYAMEEL 233
+LL+CPVC + I QC GH +C CK+R+ + CP R R A+E++
Sbjct: 53 ELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKV 107
>At5g37870.1 68418.m04561 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 281
Score = 46.0 bits (104), Expect = 6e-05
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 57 LPDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRL-DVCPXRRALFFGTRNYAMEEL 233
L DLD +L CP+CY+ +FQC GH C C +L + CP R AME +
Sbjct: 37 LTDLD-ILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERV 95
Query: 234 IANV 245
+ +V
Sbjct: 96 LESV 99
>At1g66610.1 68414.m07569 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 366
Score = 45.6 bits (103), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 39 VVKPGALPDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRL-DVCPXRRALFFGTRN 215
VV+ G L +LD LL CP+C + IFQC++GH C C + + CP R+
Sbjct: 42 VVRSGTLFELD-LLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRS 100
Query: 216 YAMEELI 236
ME ++
Sbjct: 101 RIMERVV 107
>At4g27880.1 68417.m04002 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 327
Score = 44.4 bits (100), Expect = 2e-04
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 72 DLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRL-DVCPXRRALFFGTRNYAMEEL 233
+LL+CPVC I QC+ GH +C CK+R+ + CP R R A+E++
Sbjct: 60 ELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKV 114
>At1g66650.1 68414.m07573 seven in absentia (SINA) protein, putative
similar to SIAH2 protein [Brassica napus var. napus]
GI:7657878; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 329
Score = 44.4 bits (100), Expect = 2e-04
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +3
Query: 6 LKDSLRXARRTVV---KPGALPDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRLDV 176
L D LR R+ V K LP+ ++L+CP C++ IFQCN GH C C I+L
Sbjct: 58 LGDVLRTCRKRRVSSPKSVTLPN-SNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKK 116
Query: 177 -CPXRRALFFGTRNYAMEELI 236
C + R AME++I
Sbjct: 117 RCSFCKLPIGDVRCRAMEKVI 137
>At3g61790.1 68416.m06933 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 326
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +3
Query: 51 GALP---DLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRL-DVCPXRRALFFGTRNY 218
G LP + +LL+CPVC I QC+ GH +C CK R+ + CP R R
Sbjct: 49 GLLPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCL 108
Query: 219 AMEEL 233
A+E++
Sbjct: 109 ALEKV 113
>At1g66630.1 68414.m07571 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 303
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +3
Query: 39 VVKPGALPDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQC----KIRLDVCPXRRALFFG 206
V + L +LD LL CP+CY I+QC+ GH C C K + C R F
Sbjct: 35 VARSATLLELD-LLDCPICYHKLGAPIYQCDNGHIACSSCCKKVKYKCPYCSLRIGFF-- 91
Query: 207 TRNYAMEELIANV 245
R+ +E+++ V
Sbjct: 92 -RSRILEKIVEAV 103
>At5g62800.1 68418.m07883 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 348
Score = 42.3 bits (95), Expect = 8e-04
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +3
Query: 72 DLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRL-DVCPXRRA-LFFGT-RNYAMEELI 236
D+L CPVC+E + FQC++GH VC+ C ++ + CP L G R +AME ++
Sbjct: 39 DVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVL 96
>At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 489
Score = 41.1 bits (92), Expect = 0.002
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 69 DDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPXRRA 194
DD+ CP+C P F C GH C +C L VCP RA
Sbjct: 441 DDIQLCPICLSNPKNMAFGC--GHQTCCECGPDLKVCPICRA 480
>At5g37930.1 68418.m04569 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 349
Score = 40.7 bits (91), Expect = 0.002
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 72 DLLQCPVCYEIPSGQIFQCNEGHHVCDQC--KIRLDVCPXRRALFFGTRNYAMEELI 236
D+L CP+C E IFQC+ GH C C K+R + CP R AME++I
Sbjct: 109 DVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVR-NRCPSCTLPIGYVRCRAMEKVI 164
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 36.7 bits (81), Expect = 0.039
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +3
Query: 30 RRTVVKPGALPDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPXRRA 194
R + V P D+ L CP+C P F C GH C +C L +CP RA
Sbjct: 408 RSSPVPPPTSSASDNQL-CPICLSNPKDMAFGC--GHQTCCECGPDLQMCPICRA 459
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 36.7 bits (81), Expect = 0.039
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +3
Query: 30 RRTVVKPGALPDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPXRRA 194
R + V P D+ L CP+C P F C GH C +C L +CP RA
Sbjct: 408 RSSPVPPPTSSASDNQL-CPICLSNPKDMAFGC--GHQTCCECGPDLQMCPICRA 459
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 36.7 bits (81), Expect = 0.039
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +3
Query: 30 RRTVVKPGALPDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPXRRA 194
R + V P D+ L CP+C P F C GH C +C L +CP RA
Sbjct: 408 RSSPVPPPTSSASDNQL-CPICLSNPKDMAFGC--GHQTCCECGPDLQMCPICRA 459
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 36.7 bits (81), Expect = 0.039
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +3
Query: 30 RRTVVKPGALPDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPXRRA 194
R + V P D+ L CP+C P F C GH C +C L +CP RA
Sbjct: 408 RSSPVPPPTSSASDNQL-CPICLSNPKDMAFGC--GHQTCCECGPDLQMCPICRA 459
>At5g63970.1 68418.m08032 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 367
Score = 35.1 bits (77), Expect = 0.12
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 84 CPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPXRR 191
CP+C P F C GH C +C + + CP R
Sbjct: 323 CPICLTNPKDMAFSC--GHTTCKECGVVITTCPLCR 356
>At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 32.3 bits (70), Expect = 0.85
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 84 CPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPXRRA 194
CPVC F C GH C C L VCP R+
Sbjct: 390 CPVCLVSAKNMAFNC--GHQTCAGCGEDLHVCPICRS 424
>At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 453
Score = 32.3 bits (70), Expect = 0.85
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 84 CPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPXRRA 194
CPVC F C GH C C L VCP R+
Sbjct: 410 CPVCLVSAKNMAFNC--GHQTCAGCGEDLHVCPICRS 444
>At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 32.3 bits (70), Expect = 0.85
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 84 CPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPXRRA 194
CPVC F C GH C C L VCP R+
Sbjct: 390 CPVCLVSAKNMAFNC--GHQTCAGCGEDLHVCPICRS 424
>At1g30420.1 68414.m03718 ATP-binding cassette transport protein,
putative contains Pfam profiles PF00005: ABC
transporter, PF00664: ABC transporter transmembrane
region
Length = 1488
Score = 32.3 bits (70), Expect = 0.85
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 40 LLSLXHYQIWMTFYNVLCAMKYLQVKFSN-VMKVIMCVTSVKFVLMCALXAEHYSLGPE 213
LL L Y+IW+T YN + L+ + + V+ ++ C V+ VL + + +G E
Sbjct: 46 LLGLCFYRIWITLYNAKAQIYVLRKMYYHCVLWILACCCVVEPVLRLVMGISLFDMGDE 104
>At1g30410.1 68414.m03717 ATP-binding cassette transport protein,
putative similar to MgATP-energized glutathione
S-conjugate pump [Arabidopsis thaliana] GI:2909781;
contains Pfam profiles PF00005: ABC transporter,
PF00664: ABC transporter transmembrane region
Length = 1495
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 40 LLSLXHYQIWMTFYNVLCAMKYLQVKFSN-VMKVIMCVTSVKFVLMCALXAEHYSLGPE 213
LL L Y+IW+ F+N + L+ K+ N V+ ++ C V+ VL + + + E
Sbjct: 46 LLGLCFYRIWIIFHNTKAQIYVLRKKYYNCVLGLLACYCVVEPVLRLVMGISLFDMDEE 104
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe}; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00628:
PHD-finger, PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 1648
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 84 CPVCYEIPSGQ--IFQCNEGHHVCDQC 158
CP+C+EI Q +FQC GH C C
Sbjct: 1328 CPICHEILRNQKMVFQC--GHSTCCNC 1352
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 60 PDLDDLLQCPVCYEIPSGQIFQCNEGHHVCDQCKI 164
PDLD L CP+C +I F GH C C I
Sbjct: 44 PDLDKDLLCPICMQIIK-DAFLTACGHSFCYMCII 77
>At1g79380.1 68414.m09251 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 401
Score = 29.1 bits (62), Expect = 7.9
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 84 CPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPXRR 191
CP+C F C GH C C ++ CP R
Sbjct: 357 CPICLTNRKDVAFSC--GHMTCGDCGSKISNCPICR 390
>At1g55440.1 68414.m06341 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 653
Score = 29.1 bits (62), Expect = 7.9
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 72 DLLQCPVCYEIPSGQIFQCNEGHHVCDQCKIRLDV 176
D+ +C CY + G +++C E + C+ ++DV
Sbjct: 421 DIFKCKACYRLSCGFVYKCGE-----EYCEFQIDV 450
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,391,362
Number of Sequences: 28952
Number of extensions: 156035
Number of successful extensions: 403
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 3990377088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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