Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_E05_e613_09.seq
(1626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 99 9e-21
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 94 4e-19
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 92 2e-18
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 91 3e-18
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 91 3e-18
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 91 3e-18
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 89 1e-17
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 87 5e-17
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 87 9e-17
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 85 3e-16
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 84 6e-16
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 83 8e-16
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 83 8e-16
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 83 8e-16
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 83 8e-16
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 83 8e-16
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 83 8e-16
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 83 1e-15
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 82 2e-15
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 81 4e-15
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 81 4e-15
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 80 7e-15
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 64 7e-10
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 62 2e-09
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 59 1e-08
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 59 1e-08
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 59 1e-08
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 58 3e-08
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 52 2e-06
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 52 2e-06
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 50 9e-06
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 50 9e-06
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 33 0.84
AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p pro... 33 1.1
BT011394-1|AAR96186.1| 867|Drosophila melanogaster AT28069p pro... 31 3.4
BT010119-1|AAQ22588.1| 1042|Drosophila melanogaster AT28434p pro... 31 3.4
BT001265-1|AAN71021.1| 561|Drosophila melanogaster AT04085p pro... 31 3.4
AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p pro... 31 3.4
AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubuli... 31 3.4
AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA... 31 3.4
AE013599-2271|AAM68521.1| 466|Drosophila melanogaster CG6262-PC... 31 3.4
AE013599-2270|AAF58004.3| 867|Drosophila melanogaster CG6262-PB... 31 3.4
AE013599-2267|AAF58003.2| 1042|Drosophila melanogaster CG6262-PA... 31 3.4
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 99 bits (238), Expect = 9e-21
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL + + QI + +D+HKTA +T G YEF M FGL NA TFQR ++ +L +F
Sbjct: 226 LDLAKGFYQIEMDNKDVHKTAFSTTSGHYEFLRMPFGLRNAPSTFQRLMNNILSPYTGQF 285
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
Y DDILI S+ EH +HL +F L + + + K + E+EFLG T+ + G+
Sbjct: 286 CIVYMDDILIFSKNIGEHVNHLSCIFSCLSKANLKLQSDKCEFAREEIEFLGHTINSEGL 345
Query: 441 KPTTQKEEII 470
KP+ +K + I
Sbjct: 346 KPSQKKIDAI 355
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 94.3 bits (224), Expect = 4e-19
Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRG--QEF 260
IDL + ++QI + PE + KTA +T G YE+ M FGL NA TFQR ++++LR +
Sbjct: 301 IDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKH 360
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
Y DDI++ S + DEH L VFE+L + + + K + E FLG +T GI
Sbjct: 361 CLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGI 420
Query: 441 KPTTQKEEII 470
KP +K E I
Sbjct: 421 KPNPEKIEAI 430
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 91.9 bits (218), Expect = 2e-18
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRG--QEF 260
IDL + ++QI + E I KTA +T +G YE+ M FGL NA TFQR ++ +LR +
Sbjct: 263 IDLAKGFHQIEMDSESIAKTAFSTKYGHYEYTRMPFGLKNAPATFQRCMNNLLRPLLNKN 322
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
Y DDI++ S + +EH L AVFE+L + + + K + E FLG +T GI
Sbjct: 323 CLVYLDDIIVFSTSLEEHLQSLEAVFEKLSQANLKLQLDKCEFLRQETTFLGHVITKDGI 382
Query: 441 KPTTQKEEII 470
KP +K + I
Sbjct: 383 KPNPEKIKAI 392
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 91.5 bits (217), Expect = 3e-18
Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL ++QI + DI KTA +T G YEF + FGL NA FQR ID++LR +
Sbjct: 217 LDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKV 276
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
+ Y DDI++ S D H +LR V L + + +N KS +VEFLG+ VTA GI
Sbjct: 277 CYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGI 336
Query: 441 KPTTQKEEII 470
K +K I
Sbjct: 337 KADPKKVRAI 346
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 91.5 bits (217), Expect = 3e-18
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRG--QEF 260
IDL++ ++QI + PE I KTA T G YE+ M FGL NA TFQR +++VLR +
Sbjct: 248 IDLIKGFHQIEMDPESIPKTAFTTKTGHYEYTRMPFGLKNAPATFQRCMNDVLRPLLNKI 307
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
Y DDI++ S + +EH LRAVF+ L + + K + + FLG V+ GI
Sbjct: 308 CMVYLDDIIVFSASLEEHLQSLRAVFQALSNANLKLQLDKCEFLKHDTYFLGHMVSPEGI 367
Query: 441 KPTTQK 458
+P +K
Sbjct: 368 RPNPEK 373
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 91.5 bits (217), Expect = 3e-18
Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL Y+QI +A D KTA A G YEF + FGL NA FQR ID++LR Q +F
Sbjct: 253 LDLKSGYHQITLAERDREKTAFAVNGGKYEFRRLPFGLRNAASIFQRTIDDILREQIGKF 312
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
+ Y DD++I S +++H H+ V + L++ + I+ KS+ V FLGF VT G
Sbjct: 313 CYVYVDDVIIFSEDENDHVKHVDWVLKSLYDANMRISAEKSRFFKKSVSFLGFIVTNNGA 372
Query: 441 KPTTQKEEII 470
+K + I
Sbjct: 373 ATDPEKVKAI 382
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 89.4 bits (212), Expect = 1e-17
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEV---LRGQE 257
+DL ++QI + P+DI KTA G YEF M FGL NA TFQR +D V L G
Sbjct: 410 LDLTSGFHQIEMNPKDIAKTAFTVEGGHYEFTRMPFGLKNAPATFQRVMDSVLGDLNGTI 469
Query: 258 FVFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAG 437
+F Y DDI+I S + +H ++ VFE+L + +KS+ E+EFLG VT G
Sbjct: 470 CLF-YLDDIIIFSPSLQKHLLDIKMVFEKLRAANFKLQPSKSEFLRKEIEFLGHIVTQDG 528
Query: 438 IKPTTQK 458
+KP K
Sbjct: 529 VKPNPNK 535
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 87.4 bits (207), Expect = 5e-17
Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQEF-- 260
IDL + ++QI + I KTA +T G YE+ M FGL NA TFQR ++ +L +
Sbjct: 374 IDLAKGFHQIQMDENSIAKTAFSTKHGHYEYTRMPFGLKNAPATFQRCMNNLLEDLIYKD 433
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
Y DDI++ S +EH L+ VFE+L + + + K + E EFLG VT GI
Sbjct: 434 CLVYLDDIIVYSTPLEEHILSLKKVFEKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGI 493
Query: 441 KPTTQKEEII 470
KP K + I
Sbjct: 494 KPNPNKTKAI 503
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 86.6 bits (205), Expect = 9e-17
Identities = 50/130 (38%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL ++QI + P+D KTA G YEF M FGL NA TFQR +D +
Sbjct: 296 LDLASGFHQIEMNPDDTPKTAFTVEGGHYEFIRMPFGLKNAPATFQRVMDNIFGDLIGTI 355
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
Y DDI+I S + EH HL+ +F RL + KS E EFLG V+ G+
Sbjct: 356 CLVYLDDIIIFSTSLQEHFIHLKTIFGRLRSANFKVQLTKSYFLRRETEFLGHIVSQEGV 415
Query: 441 KPTTQKEEII 470
+P K E I
Sbjct: 416 RPNPNKIEAI 425
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 85.0 bits (201), Expect = 3e-16
Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRG--QEF 260
IDL + ++QI + E I KTA +T G YE+ M FGL NA TFQR ++ +LR +
Sbjct: 300 IDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKH 359
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
Y DDI+I S + EH + ++ VF +L + + + K + E FLG VT GI
Sbjct: 360 CLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGI 419
Query: 441 KPTTQKEEIIL 473
KP K + I+
Sbjct: 420 KPNPIKVKAIV 430
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 83.8 bits (198), Expect = 6e-16
Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRG--QEF 260
IDL ++QI + P D KTA G YEF M FGL NA TFQR +D VL
Sbjct: 278 IDLASGFHQIQMNPRDASKTAFTVENGHYEFTRMPFGLKNAPATFQRVMDNVLGDLVGNV 337
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
Y DDI++ S + +H +++VF +L + I +K E++FLG VT G+
Sbjct: 338 CLVYLDDIIVFSPSLQKHIADIKSVFTKLQNANLKIQPSKCSFLRKEIDFLGHIVTQEGV 397
Query: 441 KPTTQKEEII 470
KP K + I
Sbjct: 398 KPNPLKIQTI 407
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 83.4 bits (197), Expect = 8e-16
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL Y+QI +A D KT+ + G YEF + FGL NA FQR +D+VLR Q +
Sbjct: 256 LDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKI 315
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
+ Y DD++I S + +H H+ V + L + + ++ K++ VE+LGF V+ G
Sbjct: 316 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 375
Query: 441 KPTTQKEEII 470
K +K + I
Sbjct: 376 KSDPEKVKAI 385
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 83.4 bits (197), Expect = 8e-16
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL Y+QI +A D KT+ + G YEF + FGL NA FQR +D+VLR Q +
Sbjct: 251 LDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKI 310
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
+ Y DD++I S + +H H+ V + L + + ++ K++ VE+LGF V+ G
Sbjct: 311 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 370
Query: 441 KPTTQKEEII 470
K +K + I
Sbjct: 371 KSDPEKVKAI 380
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 83.4 bits (197), Expect = 8e-16
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL Y+QI +A D KT+ + G YEF + FGL NA FQR +D+VLR Q +
Sbjct: 286 LDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKI 345
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
+ Y DD++I S + +H H+ V + L + + ++ K++ VE+LGF V+ G
Sbjct: 346 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 405
Query: 441 KPTTQKEEII 470
K +K + I
Sbjct: 406 KSDPEKVKAI 415
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 83.4 bits (197), Expect = 8e-16
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL Y+QI +A D KT+ + G YEF + FGL NA FQR +D+VLR Q +
Sbjct: 251 LDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKI 310
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
+ Y DD++I S + +H H+ V + L + + ++ K++ VE+LGF V+ G
Sbjct: 311 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 370
Query: 441 KPTTQKEEII 470
K +K + I
Sbjct: 371 KSDPEKVKAI 380
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 83.4 bits (197), Expect = 8e-16
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL Y+QI +A D KT+ + G YEF + FGL NA FQR +D+VLR Q +
Sbjct: 251 LDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKI 310
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
+ Y DD++I S + +H H+ V + L + + ++ K++ VE+LGF V+ G
Sbjct: 311 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 370
Query: 441 KPTTQKEEII 470
K +K + I
Sbjct: 371 KSDPEKVKAI 380
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 83.4 bits (197), Expect = 8e-16
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL Y+QI +A D KT+ + G YEF + FGL NA FQR +D+VLR Q +
Sbjct: 704 LDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKI 763
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
+ Y DD++I S + +H H+ V + L + + ++ K++ VE+LGF V+ G
Sbjct: 764 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 823
Query: 441 KPTTQKEEII 470
K +K + I
Sbjct: 824 KSDPEKVKAI 833
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 83.0 bits (196), Expect = 1e-15
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQEF-- 260
IDL + ++QI + I KTA +T G +E+ M FGL NA TFQR ++ +L +
Sbjct: 289 IDLAKGFHQIQMDENSIAKTAFSTKNGHFEYTRMPFGLKNAPATFQRCMNNLLADLIYKN 348
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
Y DDI++ S + +EH LR VF +L E + + K + E EFLG +T GI
Sbjct: 349 CLVYLDDIIVYSTSLEEHIMSLRKVFLKLREANLKLQLDKCEFLKKETEFLGHIITTDGI 408
Query: 441 KPTTQKEEIIL 473
KP K + ++
Sbjct: 409 KPNPAKIKAVV 419
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 81.8 bits (193), Expect = 2e-15
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Frame = +3
Query: 84 KIDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRG---Q 254
K+DL + + V E I T+ TP G YE+ M FGL NA FQRF++++ +
Sbjct: 804 KLDLKNGFFHVHVKKESIKYTSFVTPLGQYEWLRMPFGLKNAPSVFQRFVNKIFADMIRE 863
Query: 255 EFVFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAA 434
V Y DDIL+A+ +EH L+ +F+RL E+ + + K + +++LGF +
Sbjct: 864 NKVVVYMDDILLATENINEHLETLKEIFKRLVENKLELRIDKCEFMQSSIKYLGFIINKD 923
Query: 435 GIKPTTQKEEII 470
GI P + E I
Sbjct: 924 GIMPNDKGIEAI 935
Score = 31.9 bits (69), Expect = 2.6
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +1
Query: 466 LYCDTSGTSPRLYLPSEXRRQAFDTIHG-LNHPGAKTTIKLITARXVWPNIRKDCRLWTR 642
+Y T+ Y+P E Q H L H G I+ I +PN+++ C
Sbjct: 1180 VYKKTNENRLLFYVPIEMEEQVLYKYHNELGHVGRDKMIEAIMKNYWFPNLKQKCSTHIS 1239
Query: 643 TCVDC 657
C+ C
Sbjct: 1240 NCLKC 1244
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 81.0 bits (191), Expect = 4e-15
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL Y+QI +A D KT+ + G YEF + FGL NA FQR +D+VLR Q +
Sbjct: 286 LDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKI 345
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
+ Y DD++I S + +H H+ V + L + + ++ K++ VE+LGF V+ G
Sbjct: 346 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFTESVEYLGFIVSKDGT 405
Query: 441 KPTTQKEEII 470
+K + I
Sbjct: 406 ISDPEKVKAI 415
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 81.0 bits (191), Expect = 4e-15
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL ++QI + DI KTA + G YEF + FGL NA FQR +D++L +
Sbjct: 289 LDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALDDILHEHIGKI 348
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
F Y DDI+I S+ + H +L +F L + + K + +VEFLGF V+ GI
Sbjct: 349 CFIYIDDIIIFSKDDETHYQNLDTIFRTLQQANMKCQLDKCEFMKRKVEFLGFVVSDKGI 408
Query: 441 KPTTQKEEII 470
+ + K + I
Sbjct: 409 ETSPTKVQAI 418
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 80.2 bits (189), Expect = 7e-15
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQ--EF 260
+DL A++QI +A +D KTA + G YEF + FGL NA FQR ID+V+R + +
Sbjct: 282 LDLKSAFHQILLAEKDRAKTAFSVGNGKYEFCRLPFGLKNAPSIFQRAIDDVVRDRIGKS 341
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
+ Y DD++I S ++H + + V +RL + ++ KS VE+LGF V++ GI
Sbjct: 342 CYVYVDDVIIFSNGIEDHVNDVAWVLDRLSGANMRVSKEKSFFFKESVEYLGFMVSSGGI 401
Query: 441 KPTTQKEEII 470
+ K E I
Sbjct: 402 TTSPSKVEAI 411
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 63.7 bits (148), Expect = 7e-10
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQEFVF 266
+DL ++QI + DI KTA + G YEF + FGL NA FQR +D + +
Sbjct: 132 LDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALDG-YSSRTYRV 190
Query: 267 PYSDDILIASR--TKDEHEHH--LRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAA 434
Y IL S +KD+ H+ L +F L + + K + +VEFLGF V+
Sbjct: 191 RYVSFILTTSSSFSKDDETHYQNLDTIFRTLQQANMKCQLDKCEFMKRKVEFLGFVVSDK 250
Query: 435 GIKPTTQKEEII 470
GI+ + K + I
Sbjct: 251 GIETSPTKVQAI 262
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 62.5 bits (145), Expect = 2e-09
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLR--GQEF 260
+D+ ++QIP+ PE + TA F+ GL NA FQR + L F
Sbjct: 546 LDMASGFHQIPIHPESVEYTA-----------FVPDGLKNAPSVFQRTVINALGDLANSF 594
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
V Y DDI++ S TK+ L+ V L + G N AK V++LG+ V A I
Sbjct: 595 VIVYMDDIMVVSPTKELALERLKTVLNVLTKAGFTFNLAKCSFLKTTVQYLGYEVRAGEI 654
Query: 441 KPTTQK 458
+P +K
Sbjct: 655 RPNVRK 660
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 59.3 bits (137), Expect = 1e-08
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQE--F 260
+DL+ ++QI + T+ +T G Y F + FGL A +FQR + G E
Sbjct: 409 LDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQ 468
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
F Y DD+++ ++ +L VF + E+ + ++ K + EV FLG T GI
Sbjct: 469 AFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGI 528
Query: 441 KPTTQKEEII 470
P +K ++I
Sbjct: 529 LPDDKKYDVI 538
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +1
Query: 535 DTIHGLNHPGAKTTIKLITARXVWPNIRKDCRLWTRTCVDC*RSKVTPPHEVARCMXLXH 714
D I G H G T+ + W N+ K + + R C C ++K T + +
Sbjct: 903 DPIQG-GHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETP 961
Query: 715 QRAXFSXVHVDIIWDHYRISNGFKY 789
+ A F V VD I + NG +Y
Sbjct: 962 EHA-FDRVVVDTIGPLPKSENGNEY 985
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 59.3 bits (137), Expect = 1e-08
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQE--F 260
+DL+ ++QI + T+ +T G Y F + FGL A +FQR + G E
Sbjct: 172 LDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQ 231
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
F Y DD+++ ++ +L VF + E+ + ++ K + EV FLG T GI
Sbjct: 232 AFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGI 291
Query: 441 KPTTQKEEII 470
P +K ++I
Sbjct: 292 LPDDKKYDVI 301
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +1
Query: 535 DTIHGLNHPGAKTTIKLITARXVWPNIRKDCRLWTRTCVDC*RSKVTPPHEVARCMXLXH 714
D I G H G T+ + W N+ K + + R C C ++K T + +
Sbjct: 666 DPIQG-GHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETP 724
Query: 715 QRAXFSXVHVDIIWDHYRISNGFKY 789
+ A F V VD I + NG +Y
Sbjct: 725 EHA-FDRVVVDTIGPLPKSENGNEY 748
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 59.3 bits (137), Expect = 1e-08
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQE--F 260
+DL+ ++QI + + + T+ +T G Y F + +GL A +FQR + G E
Sbjct: 303 LDLMSGFHQIELEEDSRNITSFSTSSGSYRFTRLPYGLKIAPNSFQRMMTMAFTGLEPSQ 362
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
F Y DD+++ ++ +L VFE ++ + ++ K + EV FLG T GI
Sbjct: 363 AFLYMDDLIVIGCSEKHMTKNLTNVFELCRKNNLKLHPDKCSFFMSEVTFLGHKCTDKGI 422
Query: 441 KPTTQKEEII 470
P K + I
Sbjct: 423 LPDDTKYDAI 432
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 58.0 bits (134), Expect = 3e-08
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQE--F 260
+DL+ ++QI + T+ +T G Y F + +GL A +FQR + G E
Sbjct: 164 LDLMSGFHQIELEKRYRDITSFSTANGSYRFTRLPYGLKVAPNSFQRRMTLAFSGLEPSQ 223
Query: 261 VFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGI 440
F Y DD+++ ++ +L VFE H + ++ K + EV +LG T GI
Sbjct: 224 AFLYMDDLVVIGCSEKHMLKNLTNVFELCRRHNLKLHPGKCSFFMKEVTYLGHKCTDKGI 283
Query: 441 KPTTQKEEII 470
P K E+I
Sbjct: 284 LPDDTKYEVI 293
Score = 33.5 bits (73), Expect = 0.84
Identities = 22/85 (25%), Positives = 34/85 (40%)
Frame = +1
Query: 535 DTIHGLNHPGAKTTIKLITARXVWPNIRKDCRLWTRTCVDC*RSKVTPPHEVARCMXLXH 714
D I G H G T I WP + K + +TC+ C ++K+T H +
Sbjct: 661 DPIEG-GHTGISRTQSKIKRFYYWPQMTKTISKYVKTCLKCQQAKIT-THTKTPLTLMPT 718
Query: 715 QRAXFSXVHVDIIWDHYRISNGFKY 789
F V +D I + +G +Y
Sbjct: 719 PATAFDTVLIDTIGPLPKSEDGNEY 743
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 52.4 bits (120), Expect = 2e-06
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Frame = +3
Query: 105 YNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQE--FVFPYSD 278
++QI + + T+ +T G Y F + FGL A +FQR + G E F Y D
Sbjct: 4 FHQIELEENSRNITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTISFSGLEPSQAFLYMD 63
Query: 279 DILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQK 458
D+++ ++ +L VF ++ + ++ K + EV FLG T G+ P +K
Sbjct: 64 DLMVIGCSEKHMIKNLTDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDDKK 123
Query: 459 EEII 470
++I
Sbjct: 124 YDVI 127
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 52.4 bits (120), Expect = 2e-06
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Frame = +3
Query: 105 YNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLRGQE--FVFPYSD 278
++QI + + T+ +T G Y F + FGL A +FQR + G E F Y D
Sbjct: 4 FHQIELEENSRNITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTISFSGLEPSQAFLYMD 63
Query: 279 DILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQK 458
D+++ ++ +L VF ++ + ++ K + EV FLG T G+ P +K
Sbjct: 64 DLMVIGCSEKHMIKNLTDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDDKK 123
Query: 459 EEII 470
++I
Sbjct: 124 YDVI 127
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 50.0 bits (114), Expect = 9e-06
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLR---GQE 257
+DL + + V TA T GL+EF FG N+ F RF+ + +
Sbjct: 577 MDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFVQFIFQELINSN 636
Query: 258 FVFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAG 437
+ Y DDI++ + T +E V +R E G+ I K + FLG +
Sbjct: 637 IMQLYMDDIIVYAATPEECMEKTEMVLKRAAEFGLKIKWKKCNFMQRRIHFLGHIIEGGQ 696
Query: 438 IKPTTQKEEII 470
I P +K +
Sbjct: 697 ICPGKEKTSAV 707
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 50.0 bits (114), Expect = 9e-06
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Frame = +3
Query: 87 IDLVRAYNQIPVAPEDIHKTAIATPFGLYEFPFMTFGLCNAGQTFQRFIDEVLR---GQE 257
+DL + + V TA T GL+EF FG N+ F RF+ + +
Sbjct: 271 MDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFVQFIFQELINSN 330
Query: 258 FVFPYSDDILIASRTKDEHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEFLGFTVTAAG 437
+ Y DDI++ + T +E V +R E G+ I K + FLG +
Sbjct: 331 IMQLYMDDIIVYAATPEECMEKTEMVLKRAAEFGLKIKWKKCNFMQRRIHFLGHIIEGGQ 390
Query: 438 IKPTTQKEEII 470
I P +K +
Sbjct: 391 ICPGKEKTSAV 401
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 33.5 bits (73), Expect = 0.84
Identities = 21/78 (26%), Positives = 30/78 (38%)
Frame = +1
Query: 556 HPGAKTTIKLITARXVWPNIRKDCRLWTRTCVDC*RSKVTPPHEVARCMXLXHQRAXFSX 735
H G T++ + WP + K + TC+ C +SK T H F
Sbjct: 296 HSGISRTLRKMKNCCCWPRMTKAISEYVETCLKCQQSKTT-KHTKTPLTITETPATAFDI 354
Query: 736 VHVDIIWDHYRISNGFKY 789
V +D I R NG +Y
Sbjct: 355 VLIDTIGPLPRSENGNEY 372
>AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p
protein.
Length = 320
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +1
Query: 535 DTIHGLNHPGAKTTIKLITARXVWPNIRKDCRLWTRTCVDC*RSKVTPPHEVARCMXLXH 714
D I G H G T+ + W N+ K + + R C C ++K T + +
Sbjct: 54 DPIQG-GHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETP 112
Query: 715 QRAXFSXVHVDIIWDHYRISNGFKY 789
+ A F V VD I + NG +Y
Sbjct: 113 EHA-FDRVVVDTIGPLPKSENGNEY 136
>BT011394-1|AAR96186.1| 867|Drosophila melanogaster AT28069p
protein.
Length = 867
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 454 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCSC 347
CV G P+ V ST+ T + DFAQ PCSC
Sbjct: 411 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCSC 445
>BT010119-1|AAQ22588.1| 1042|Drosophila melanogaster AT28434p
protein.
Length = 1042
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 454 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCSC 347
CV G P+ V ST+ T + DFAQ PCSC
Sbjct: 586 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCSC 620
>BT001265-1|AAN71021.1| 561|Drosophila melanogaster AT04085p
protein.
Length = 561
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 454 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCSC 347
CV G P+ V ST+ T + DFAQ PCSC
Sbjct: 105 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCSC 139
>AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p protein.
Length = 1351
Score = 31.5 bits (68), Expect = 3.4
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +3
Query: 132 DIHKTAIATPFGLY-EFPFMTFGLCNAGQTFQRFIDEVLRGQEFVFPYSDDILIASRTKD 308
D+ KTA +T GL+ E P N T + + E+ R ++ + D + T+D
Sbjct: 794 DLLKTAASTSSGLHAEIPQDINANLNCPDTKE--LTELQRNRKRN-EHHDGFFSFNSTED 850
Query: 309 EHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEF-LGFTVTAAGIKPT 449
EH H LR++ E G +++L V E EF LG+ T K T
Sbjct: 851 EHTHRLRSLLNSNTERG------RNRLRVMETEFGLGYKNTDIETKAT 892
>AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubulin
ring protein protein.
Length = 1351
Score = 31.5 bits (68), Expect = 3.4
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +3
Query: 132 DIHKTAIATPFGLY-EFPFMTFGLCNAGQTFQRFIDEVLRGQEFVFPYSDDILIASRTKD 308
D+ KTA +T GL+ E P N T + + E+ R ++ + D + T+D
Sbjct: 794 DLLKTAASTSSGLHAEIPQDINANLNCPDTKE--LTELQRNRKRN-EHHDGFFSFNSTED 850
Query: 309 EHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEF-LGFTVTAAGIKPT 449
EH H LR++ E G +++L V E EF LG+ T K T
Sbjct: 851 EHTHRLRSLLNSNTERG------RNRLRVMETEFGLGYKNTDIETKAT 892
>AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA
protein.
Length = 1351
Score = 31.5 bits (68), Expect = 3.4
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +3
Query: 132 DIHKTAIATPFGLY-EFPFMTFGLCNAGQTFQRFIDEVLRGQEFVFPYSDDILIASRTKD 308
D+ KTA +T GL+ E P N T + + E+ R ++ + D + T+D
Sbjct: 794 DLLKTAASTSSGLHAEIPQDINANLNCPDTKE--LTELQRNRKRN-EHHDGFFSFNSTED 850
Query: 309 EHEHHLRAVFERLHEHGVLINCAKSQLGVPEVEF-LGFTVTAAGIKPT 449
EH H LR++ E G +++L V E EF LG+ T K T
Sbjct: 851 EHTHRLRSLLNSNTERG------RNRLRVMETEFGLGYKNTDIETKAT 892
>AE013599-2271|AAM68521.1| 466|Drosophila melanogaster CG6262-PC,
isoform C protein.
Length = 466
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 454 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCSC 347
CV G P+ V ST+ T + DFAQ PCSC
Sbjct: 10 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCSC 44
>AE013599-2270|AAF58004.3| 867|Drosophila melanogaster CG6262-PB,
isoform B protein.
Length = 867
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 454 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCSC 347
CV G P+ V ST+ T + DFAQ PCSC
Sbjct: 411 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCSC 445
>AE013599-2267|AAF58003.2| 1042|Drosophila melanogaster CG6262-PA,
isoform A protein.
Length = 1042
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 454 CVVGLIPAAVTVKPRNSTSGTPS*DFAQLMSTPCSC 347
CV G P+ V ST+ T + DFAQ PCSC
Sbjct: 586 CVCGA-PSMVGTMSHKSTATTATSDFAQQTQPPCSC 620
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,058,178
Number of Sequences: 53049
Number of extensions: 774579
Number of successful extensions: 1672
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1645
length of database: 24,988,368
effective HSP length: 89
effective length of database: 20,267,007
effective search space used: 9160687164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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