Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_E04_e605_10.seq
         (1528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   2.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   2.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   6.0  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = +3

Query: 405 THPIKNELQRIKATMMKWQQVKDHDKRPQVDREAVKRFIRSGL 533
           T P+ +  Q  +    KW    D  + P V  E  + +I  G+
Sbjct: 15  TEPLYSSTQMPEKVREKWNVFDDPPREPTVGSEVKRTYIEWGV 57


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = +3

Query: 405 THPIKNELQRIKATMMKWQQVKDHDKRPQVDREAVKRFIRSGL 533
           T P+ +  Q  +    KW    D  + P V  E  + +I  G+
Sbjct: 15  TEPLYSSTQMPEKVREKWNVFDDPPREPTVGSEVKRTYIEWGV 57


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 120 IYLSRFKMKENISKSVIKW 176
           I+L    +KEN   +VIKW
Sbjct: 166 IFLQNLILKENTYDAVIKW 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,692
Number of Sequences: 336
Number of extensions: 5244
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45886400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)