Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_E04_e605_10.seq
(1528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017884-1|AAH17884.1| 134|Homo sapiens Unknown (protein for IM... 86 3e-16
X95592-1|CAA64845.1| 141|Homo sapiens C1D protein protein. 85 9e-16
BC016284-1|AAH16284.1| 141|Homo sapiens nuclear DNA-binding pro... 85 9e-16
BC009589-1|AAH09589.1| 141|Homo sapiens nuclear DNA-binding pro... 85 9e-16
BC009584-1|AAH09584.1| 141|Homo sapiens nuclear DNA-binding pro... 85 9e-16
BC005235-1|AAH05235.1| 141|Homo sapiens nuclear DNA-binding pro... 85 9e-16
AC079112-1|AAX88887.1| 141|Homo sapiens unknown protein. 85 9e-16
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 32 4.8
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 32 4.8
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 4.8
AB016090-1|BAA83716.1| 802|Homo sapiens RNA binding protein pro... 32 4.8
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 32 4.8
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 4.8
AK097771-1|BAC05168.1| 320|Homo sapiens protein ( Homo sapiens ... 32 6.4
>BC017884-1|AAH17884.1| 134|Homo sapiens Unknown (protein for
IMAGE:4295997) protein.
Length = 134
Score = 86.2 bits (204), Expect = 3e-16
Identities = 42/130 (32%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
Frame = +3
Query: 192 ELSQDKDF-VNNYDSLIQN-LKELQEVLDQVLPLKQH--YDKLSIPDQIELDLFLAFTLN 359
E+++D ++ Y S +N + + E+L ++ + ++ KL +Q ++DL A+TLN
Sbjct: 5 EINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLN 64
Query: 360 SLYWVNLRIQGIDPMTHPIKNELQRIKATMMKWQQVKDHDKRPQVDREAVKRFIRSGLYD 539
S++WV L QG++P HP+K EL+RI+ M + +++ D K ++DR A RF+++ L++
Sbjct: 65 SMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
Query: 540 PSKPNTQQNK 569
P K ++ K
Sbjct: 125 PKKKKKKKKK 134
>X95592-1|CAA64845.1| 141|Homo sapiens C1D protein protein.
Length = 141
Score = 84.6 bits (200), Expect = 9e-16
Identities = 41/128 (32%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Frame = +3
Query: 192 ELSQDKDF-VNNYDSLIQN-LKELQEVLDQVLPLKQH--YDKLSIPDQIELDLFLAFTLN 359
E+++D ++ Y S +N + + E+L ++ + ++ KL +Q ++DL A+TLN
Sbjct: 5 EINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLN 64
Query: 360 SLYWVNLRIQGIDPMTHPIKNELQRIKATMMKWQQVKDHDKRPQVDREAVKRFIRSGLYD 539
S++WV L QG++P HP+K EL+RI+ M + +++ D K ++DR A RF+++ L++
Sbjct: 65 SMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
Query: 540 PSKPNTQQ 563
P N +
Sbjct: 125 PKSKNASK 132
>BC016284-1|AAH16284.1| 141|Homo sapiens nuclear DNA-binding
protein protein.
Length = 141
Score = 84.6 bits (200), Expect = 9e-16
Identities = 41/128 (32%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Frame = +3
Query: 192 ELSQDKDF-VNNYDSLIQN-LKELQEVLDQVLPLKQH--YDKLSIPDQIELDLFLAFTLN 359
E+++D ++ Y S +N + + E+L ++ + ++ KL +Q ++DL A+TLN
Sbjct: 5 EINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLN 64
Query: 360 SLYWVNLRIQGIDPMTHPIKNELQRIKATMMKWQQVKDHDKRPQVDREAVKRFIRSGLYD 539
S++WV L QG++P HP+K EL+RI+ M + +++ D K ++DR A RF+++ L++
Sbjct: 65 SMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
Query: 540 PSKPNTQQ 563
P N +
Sbjct: 125 PKSKNASK 132
>BC009589-1|AAH09589.1| 141|Homo sapiens nuclear DNA-binding
protein protein.
Length = 141
Score = 84.6 bits (200), Expect = 9e-16
Identities = 41/128 (32%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Frame = +3
Query: 192 ELSQDKDF-VNNYDSLIQN-LKELQEVLDQVLPLKQH--YDKLSIPDQIELDLFLAFTLN 359
E+++D ++ Y S +N + + E+L ++ + ++ KL +Q ++DL A+TLN
Sbjct: 5 EINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLN 64
Query: 360 SLYWVNLRIQGIDPMTHPIKNELQRIKATMMKWQQVKDHDKRPQVDREAVKRFIRSGLYD 539
S++WV L QG++P HP+K EL+RI+ M + +++ D K ++DR A RF+++ L++
Sbjct: 65 SMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
Query: 540 PSKPNTQQ 563
P N +
Sbjct: 125 PKSKNASK 132
>BC009584-1|AAH09584.1| 141|Homo sapiens nuclear DNA-binding
protein protein.
Length = 141
Score = 84.6 bits (200), Expect = 9e-16
Identities = 41/128 (32%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Frame = +3
Query: 192 ELSQDKDF-VNNYDSLIQN-LKELQEVLDQVLPLKQH--YDKLSIPDQIELDLFLAFTLN 359
E+++D ++ Y S +N + + E+L ++ + ++ KL +Q ++DL A+TLN
Sbjct: 5 EINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLN 64
Query: 360 SLYWVNLRIQGIDPMTHPIKNELQRIKATMMKWQQVKDHDKRPQVDREAVKRFIRSGLYD 539
S++WV L QG++P HP+K EL+RI+ M + +++ D K ++DR A RF+++ L++
Sbjct: 65 SMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
Query: 540 PSKPNTQQ 563
P N +
Sbjct: 125 PKSKNASK 132
>BC005235-1|AAH05235.1| 141|Homo sapiens nuclear DNA-binding
protein protein.
Length = 141
Score = 84.6 bits (200), Expect = 9e-16
Identities = 41/128 (32%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Frame = +3
Query: 192 ELSQDKDF-VNNYDSLIQN-LKELQEVLDQVLPLKQH--YDKLSIPDQIELDLFLAFTLN 359
E+++D ++ Y S +N + + E+L ++ + ++ KL +Q ++DL A+TLN
Sbjct: 5 EINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLN 64
Query: 360 SLYWVNLRIQGIDPMTHPIKNELQRIKATMMKWQQVKDHDKRPQVDREAVKRFIRSGLYD 539
S++WV L QG++P HP+K EL+RI+ M + +++ D K ++DR A RF+++ L++
Sbjct: 65 SMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
Query: 540 PSKPNTQQ 563
P N +
Sbjct: 125 PKSKNASK 132
>AC079112-1|AAX88887.1| 141|Homo sapiens unknown protein.
Length = 141
Score = 84.6 bits (200), Expect = 9e-16
Identities = 41/128 (32%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Frame = +3
Query: 192 ELSQDKDF-VNNYDSLIQN-LKELQEVLDQVLPLKQH--YDKLSIPDQIELDLFLAFTLN 359
E+++D ++ Y S +N + + E+L ++ + ++ KL +Q ++DL A+TLN
Sbjct: 5 EINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLN 64
Query: 360 SLYWVNLRIQGIDPMTHPIKNELQRIKATMMKWQQVKDHDKRPQVDREAVKRFIRSGLYD 539
S++WV L QG++P HP+K EL+RI+ M + +++ D K ++DR A RF+++ L++
Sbjct: 65 SMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWE 124
Query: 540 PSKPNTQQ 563
P N +
Sbjct: 125 PKSKNASK 132
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SGVTS*TALRQTFNSRPDRARLISSFY-IKFSLLGKLAHTGNRPNDPSNQKRAPENQSHN 448
SG +S + R T + P R+R +S ++ LL + +H+G+ D + P QSH+
Sbjct: 931 SGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHS 990
Query: 449 DEMAAGKRSR*ETASG 496
++ + + +T G
Sbjct: 991 GSISPYPKVKAQTPPG 1006
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SGVTS*TALRQTFNSRPDRARLISSFY-IKFSLLGKLAHTGNRPNDPSNQKRAPENQSHN 448
SG +S + R T + P R+R +S ++ LL + +H+G+ D + P QSH+
Sbjct: 931 SGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHS 990
Query: 449 DEMAAGKRSR*ETASG 496
++ + + +T G
Sbjct: 991 GSISPYPKVKAQTPPG 1006
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SGVTS*TALRQTFNSRPDRARLISSFY-IKFSLLGKLAHTGNRPNDPSNQKRAPENQSHN 448
SG +S + R T + P R+R +S ++ LL + +H+G+ D + P QSH+
Sbjct: 931 SGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHS 990
Query: 449 DEMAAGKRSR*ETASG 496
++ + + +T G
Sbjct: 991 GSISPYPKVKAQTPPG 1006
>AB016090-1|BAA83716.1| 802|Homo sapiens RNA binding protein
protein.
Length = 802
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SGVTS*TALRQTFNSRPDRARLISSFY-IKFSLLGKLAHTGNRPNDPSNQKRAPENQSHN 448
SG +S + R T + P R+R +S ++ LL + +H+G+ D + P QSH+
Sbjct: 57 SGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHS 116
Query: 449 DEMAAGKRSR*ETASG 496
++ + + +T G
Sbjct: 117 GSISPYPKVKAQTPPG 132
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SGVTS*TALRQTFNSRPDRARLISSFY-IKFSLLGKLAHTGNRPNDPSNQKRAPENQSHN 448
SG +S + R T + P R+R +S ++ LL + +H+G+ D + P QSH+
Sbjct: 721 SGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHS 780
Query: 449 DEMAAGKRSR*ETASG 496
++ + + +T G
Sbjct: 781 GSISPYPKVKAQTPPG 796
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SGVTS*TALRQTFNSRPDRARLISSFY-IKFSLLGKLAHTGNRPNDPSNQKRAPENQSHN 448
SG +S + R T + P R+R +S ++ LL + +H+G+ D + P QSH+
Sbjct: 979 SGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHS 1038
Query: 449 DEMAAGKRSR*ETASG 496
++ + + +T G
Sbjct: 1039 GSISPYPKVKAQTPPG 1054
>AK097771-1|BAC05168.1| 320|Homo sapiens protein ( Homo sapiens cDNA
FLJ40452 fis, clone TESTI2040989, weakly similar to GCD14
PROTEIN. ).
Length = 320
Score = 31.9 bits (69), Expect = 6.4
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +2
Query: 1277 GRXGXFXXDXNPFPGXXPXKXG-GGXGXLKAXGTWGXXXLGXXPALXDXRXAXXPPXXGG 1453
G G D +PF P K G G L +WG PAL R P GG
Sbjct: 253 GTDGPAGSDTSPFRSGTPMKEAVGHTGYLTLARSWGELTQNPCPALPSARRPGQPRNQGG 312
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,312,389
Number of Sequences: 237096
Number of extensions: 3205228
Number of successful extensions: 5330
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5330
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22745790610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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