Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_E03_e597_09.seq
(1535 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 114 2e-25
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 114 2e-25
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 114 2e-25
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 112 6e-25
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 112 6e-25
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 112 6e-25
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 112 6e-25
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 53 5e-07
11_06_0294 + 22022630-22024006,22024109-22024234,22024319-220244... 30 4.2
11_06_0278 - 21854859-21855101,21855529-21855587,21855684-218557... 30 4.2
09_02_0036 + 3217163-3217584,3217752-3218322 30 4.2
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426... 30 5.6
07_01_1153 - 10842259-10842390,10843348-10845315 29 7.4
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 114 bits (275), Expect = 2e-25
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +3
Query: 93 MVNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 266
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 267 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 114 bits (275), Expect = 2e-25
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +3
Query: 93 MVNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 266
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 267 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 114 bits (275), Expect = 2e-25
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +3
Query: 93 MVNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 266
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 267 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 112 bits (270), Expect = 6e-25
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +3
Query: 96 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 269
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 270 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 90 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 112 bits (270), Expect = 6e-25
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +3
Query: 96 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 269
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 270 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 90 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 112 bits (270), Expect = 6e-25
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +3
Query: 96 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 269
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 29 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 88
Query: 270 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 89 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 128
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 112 bits (270), Expect = 6e-25
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +3
Query: 96 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 269
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 270 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 90 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 53.2 bits (122), Expect = 5e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 288 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVL+L+C CK SQ +KRCKHF++GGDKK KG
Sbjct: 25 IVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>11_06_0294 +
22022630-22024006,22024109-22024234,22024319-22024423,
22024525-22024659,22024798-22024847,22026487-22026545,
22026819-22026928,22027941-22028174,22028278-22028377,
22028699-22028829,22029834-22029914,22029970-22030128
Length = 888
Score = 30.3 bits (65), Expect = 4.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 558 LNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQIVSVNILLKFAL 701
L+R + PF SW N +A D+ + L LNG + + LK L
Sbjct: 399 LSRPSRQDPFTSWDNMRQACLDKGTHALGKLNGRAAALIEKVNLKRGL 446
>11_06_0278 -
21854859-21855101,21855529-21855587,21855684-21855711,
21855812-21856702,21856792-21857011,21857638-21857687,
21863174-21863284,21863379-21863483,21863568-21863693,
21863796-21865187
Length = 1074
Score = 30.3 bits (65), Expect = 4.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 558 LNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQIVSVNILLKFAL 701
L+R + PF SW N +A D+ + L LNG + + LK L
Sbjct: 404 LSRPSRQDPFTSWDNMRQACLDKGTHALGKLNGRAAALIEKVNLKRGL 451
>09_02_0036 + 3217163-3217584,3217752-3218322
Length = 330
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 496 ITIHWPSFYNVV-TGKTLALPNLIALQH 576
I+ W F N+V +G TL++PN + LQH
Sbjct: 69 ISAGWSRFINLVQSGPTLSIPNYVLLQH 96
>03_04_0161 +
17838466-17838551,17842379-17842445,17842537-17842662,
17842756-17842886,17843121-17843220,17843334-17843466,
17843500-17843544,17843545-17843608,17843692-17844469,
17844897-17845229,17845427-17845634,17845733-17845809,
17846168-17846240,17846343-17846413,17846597-17846716,
17846815-17846879,17846974-17847124
Length = 875
Score = 29.9 bits (64), Expect = 5.6
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 207 RRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 353
+ + + QG GG S +F ++LE ADC + +V RCK
Sbjct: 207 KELEGRLQGIGGFSNCLFTFLFAGVSMDEVKLEQADCDMDERVYCDRCK 255
>07_01_1153 - 10842259-10842390,10843348-10845315
Length = 699
Score = 29.5 bits (63), Expect = 7.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 787 VEWLFQFWNKSXLLKNVDSTVXG 855
V+W+ + WNK L+ VDS + G
Sbjct: 562 VDWVLEQWNKGSLVSTVDSRLEG 584
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,014,631
Number of Sequences: 37544
Number of extensions: 548026
Number of successful extensions: 1243
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4942498008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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