Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_D11_e660_07.seq
         (1557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   3.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   4.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   4.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   4.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 207 TEIVPKDRLRVKVT-KTPIDKNTFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYV 383
           +E  P + L+  +  +TP    TFH  E   PD  ++    E+     Q+     L+W  
Sbjct: 237 SESSPFESLKKSLNFRTPSCLETFHTLEKCRPDPPQNLVINESIIDLSQQTYNVHLMWSK 296

Query: 384 PE 389
           P+
Sbjct: 297 PD 298


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 189 EWDNCYTEIVPKDRLRVKVTKTPIDKNTFHK 281
           ++D C   I P+++  +  T   +D+N   K
Sbjct: 88  QYDTCQQGIYPENKTLINETSLQLDENKLDK 118


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 189 EWDNCYTEIVPKDRLRVKVTKTPIDKNTFHK 281
           ++D C   I P+++  +  T   +D+N   K
Sbjct: 88  QYDTCQQGIYPENKTLINETSLQLDENKLDK 118


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 189 EWDNCYTEIVPKDRLRVKVTKTPIDKNTFHK 281
           ++D C   I P+++  +  T   +D+N   K
Sbjct: 88  QYDTCQQGIYPENKTLINETSLQLDENKLDK 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,412
Number of Sequences: 336
Number of extensions: 4466
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46910650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)