Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_D11_e660_07.seq
         (1557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    25   5.9  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   5.9  

>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -2

Query: 629 GRCRSPSVTVGHRRATRIASVSDVHMFNFFIFIE*SG 519
           G+C  P+  V + +   ++S+S +  F+F   I+ +G
Sbjct: 50  GQCMLPAECVAYGKINDVSSLSSIERFSFIKQIQCNG 86


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 384 PERAVLAVISRCDTSQKRARRTCR 455
           P+  V A+   CD +  R ++TCR
Sbjct: 250 PDDLVKALDKACDATMSRLKKTCR 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,079,214
Number of Sequences: 2352
Number of extensions: 18812
Number of successful extensions: 45
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 183284145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)