BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_D11_e660_07.seq
(1557 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ422083-1|CAD19444.1| 681|Drosophila melanogaster fragile X re... 107 4e-23
AJ413217-1|CAC88757.2| 529|Drosophila melanogaster fragile X re... 107 4e-23
AJ271221-1|CAB66340.1| 684|Drosophila melanogaster fragile X re... 107 4e-23
AF305881-1|AAG22045.1| 681|Drosophila melanogaster KH domain co... 107 4e-23
AF205597-1|AAF14640.1| 681|Drosophila melanogaster Fragile X re... 107 4e-23
AF205596-1|AAF14639.1| 681|Drosophila melanogaster Fragile X re... 107 4e-23
AE014297-1093|AAN13454.1| 529|Drosophila melanogaster CG6203-PB... 107 4e-23
AE014297-1092|AAN13453.1| 643|Drosophila melanogaster CG6203-PE... 107 4e-23
AE014297-1091|AAF54493.2| 684|Drosophila melanogaster CG6203-PA... 107 4e-23
AE014297-1090|AAN13452.1| 681|Drosophila melanogaster CG6203-PD... 107 4e-23
AE014297-1089|AAN13451.1| 681|Drosophila melanogaster CG6203-PC... 107 4e-23
AY069182-1|AAL39327.2| 577|Drosophila melanogaster GH22839p pro... 68 4e-11
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 30 7.5
BT010044-1|AAQ22513.1| 780|Drosophila melanogaster LD31742p pro... 30 9.9
AJ010150-1|CAB52415.1| 782|Drosophila melanogaster carnitine pa... 30 9.9
AE013599-1111|AAF58786.1| 780|Drosophila melanogaster CG12891-P... 30 9.9
AE013599-1110|AAF58785.2| 780|Drosophila melanogaster CG12891-P... 30 9.9
>AJ422083-1|CAD19444.1| 681|Drosophila melanogaster fragile X
related protein.
Length = 681
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 67 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 126
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 127 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 186
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 187 KDMHFRNLS-QKVMLL 201
>AJ413217-1|CAC88757.2| 529|Drosophila melanogaster fragile X
related protein protein.
Length = 529
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 67 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 126
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 127 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 186
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 187 KDMHFRNLS-QKVMLL 201
>AJ271221-1|CAB66340.1| 684|Drosophila melanogaster fragile X
related protein protein.
Length = 684
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 67 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 126
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 127 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 186
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 187 KDMHFRNLS-QKVMLL 201
>AF305881-1|AAG22045.1| 681|Drosophila melanogaster KH domain
containing RNA-bindingprotein FMR1 protein.
Length = 681
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 67 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 126
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 127 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 186
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 187 KDMHFRNLS-QKVMLL 201
>AF205597-1|AAF14640.1| 681|Drosophila melanogaster Fragile X
related protein.
Length = 681
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 67 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 126
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 127 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 186
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 187 KDMHFRNLS-QKVMLL 201
>AF205596-1|AAF14639.1| 681|Drosophila melanogaster Fragile X
related protein.
Length = 681
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 67 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 126
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 127 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 186
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 187 KDMHFRNLS-QKVMLL 201
>AE014297-1093|AAN13454.1| 529|Drosophila melanogaster CG6203-PB,
isoform B protein.
Length = 529
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 67 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 126
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 127 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 186
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 187 KDMHFRNLS-QKVMLL 201
>AE014297-1092|AAN13453.1| 643|Drosophila melanogaster CG6203-PE,
isoform E protein.
Length = 643
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 29 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 88
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 89 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 148
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 149 KDMHFRNLS-QKVMLL 163
>AE014297-1091|AAF54493.2| 684|Drosophila melanogaster CG6203-PA,
isoform A protein.
Length = 684
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 67 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 126
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 127 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 186
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 187 KDMHFRNLS-QKVMLL 201
>AE014297-1090|AAN13452.1| 681|Drosophila melanogaster CG6203-PD,
isoform D protein.
Length = 681
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 67 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 126
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 127 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 186
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 187 KDMHFRNLS-QKVMLL 201
>AE014297-1089|AAN13451.1| 681|Drosophila melanogaster CG6203-PC,
isoform C protein.
Length = 681
Score = 107 bits (257), Expect = 4e-23
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = +3
Query: 90 VEVYARSNEKEACGWWTANIKMIRGEFLVIEYLEWDNCYTEIVPKDRLRVKVTKTPIDKN 269
VEV+ R+N++E CGWW IKM + E + Y+ ++ YTEI RLR K + PI
Sbjct: 67 VEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKNSNPPITAK 126
Query: 270 TFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYVPERAVLAVISRCDTSQKRARRT 449
TF++F + VP++L++ A+ + HKEFQ+ I A + Y + L VIS+ + +QKRA
Sbjct: 127 TFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASML 186
Query: 450 CRVHRASTRLTRIMLL 497
+H + ++MLL
Sbjct: 187 KDMHFRNLS-QKVMLL 201
>AY069182-1|AAL39327.2| 577|Drosophila melanogaster GH22839p
protein.
Length = 577
Score = 67.7 bits (158), Expect = 4e-11
Identities = 37/98 (37%), Positives = 57/98 (58%)
Frame = +3
Query: 204 YTEIVPKDRLRVKVTKTPIDKNTFHKFEIAVPDDLKDYAKVENAHKEFQKVIGAALVWYV 383
YTEI RLR K + PI TF++F + VP++L++ A+ + HKEFQ+ I A + Y
Sbjct: 1 YTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYS 60
Query: 384 PERAVLAVISRCDTSQKRARRTCRVHRASTRLTRIMLL 497
+ L VIS+ + +QKRA +H + ++MLL
Sbjct: 61 RDLDALIVISKFEHTQKRASMLKDMHFRNLS-QKVMLL 97
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 7.5
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 243 VTKTPIDKNTFHKFEIAVPDDLKD--YAKVENAHKEFQKVIGAALVWYVPERAVL 401
V TP DK++ E+ +PDD K AK+E + Q V+ A +W V AVL
Sbjct: 396 VYDTPKDKDSG---ELVIPDDNKKRLIAKLEINKDDIQAVLPMAKIWEVMNTAVL 447
>BT010044-1|AAQ22513.1| 780|Drosophila melanogaster LD31742p
protein.
Length = 780
Score = 29.9 bits (64), Expect = 9.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 303 DLKDYAKVENAHKEFQKVIGAALVWYV 383
D ++Y ++E KEF++ IG L WY+
Sbjct: 195 DDENYTRMERLAKEFEQTIGKKLQWYL 221
>AJ010150-1|CAB52415.1| 782|Drosophila melanogaster carnitine
palmitoyltransferase I protein.
Length = 782
Score = 29.9 bits (64), Expect = 9.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 303 DLKDYAKVENAHKEFQKVIGAALVWYV 383
D ++Y ++E KEF++ IG L WY+
Sbjct: 195 DDENYTRMERLAKEFEQTIGKKLQWYL 221
>AE013599-1111|AAF58786.1| 780|Drosophila melanogaster CG12891-PB,
isoform B protein.
Length = 780
Score = 29.9 bits (64), Expect = 9.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 303 DLKDYAKVENAHKEFQKVIGAALVWYV 383
D ++Y ++E KEF++ IG L WY+
Sbjct: 195 DDENYTRMERLAKEFEQTIGKKLQWYL 221
>AE013599-1110|AAF58785.2| 780|Drosophila melanogaster CG12891-PA,
isoform A protein.
Length = 780
Score = 29.9 bits (64), Expect = 9.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 303 DLKDYAKVENAHKEFQKVIGAALVWYV 383
D ++Y ++E KEF++ IG L WY+
Sbjct: 195 DDENYTRMERLAKEFEQTIGKKLQWYL 221
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,010,063
Number of Sequences: 53049
Number of extensions: 851487
Number of successful extensions: 2040
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2040
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8737624080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -