Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_D10_e652_08.seq
(1561 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051268-1|AAH51268.1| 467|Homo sapiens fucosidase, alpha-L- 2,... 200 8e-51
BC003060-1|AAH03060.1| 467|Homo sapiens fucosidase, alpha-L- 2,... 200 8e-51
AY358551-1|AAQ88915.1| 467|Homo sapiens RPQE227 protein. 200 8e-51
AL031320-8|CAB53746.1| 467|Homo sapiens RP1-20N2.5 protein. 200 8e-51
AK075458-1|BAC11633.1| 467|Homo sapiens protein ( Homo sapiens ... 200 8e-51
M80815-1|AAA52481.1| 461|Homo sapiens alpha-L-fucosidase protein. 200 1e-50
M29877-1|AAA35519.1| 461|Homo sapiens protein ( Human alpha-L-f... 200 1e-50
BC017338-1|AAH17338.1| 461|Homo sapiens fucosidase, alpha-L- 1,... 200 1e-50
AL590728-1|CAH74004.2| 466|Homo sapiens fucosidase, alpha-L-1, ... 200 1e-50
AB074175-1|BAE45738.1| 466|Homo sapiens alpha-L-fucosidase prot... 200 1e-50
AL031320-9|CAD92495.1| 165|Homo sapiens RP1-20N2.5 protein. 163 2e-39
AK092914-1|BAC04002.1| 444|Homo sapiens protein ( Homo sapiens ... 141 5e-33
M10355-1|AAA52482.1| 353|Homo sapiens FUCA1 protein. 129 3e-29
BC028034-1|AAH28034.1| 277|Homo sapiens MAPK15 protein protein. 33 2.8
AY065978-1|AAL40897.1| 544|Homo sapiens extracellular signal-re... 33 2.8
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 33 3.7
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 32 6.5
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 32 6.5
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 32 6.5
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 32 6.5
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 31 8.6
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 31 8.6
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 31 8.6
X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (... 31 8.6
X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for ... 31 8.6
D17391-1|BAA04214.1| 472|Homo sapiens alpha 4(IV) collagen prot... 31 8.6
AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen a... 31 8.6
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 31 8.6
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 31 8.6
>BC051268-1|AAH51268.1| 467|Homo sapiens fucosidase, alpha-L- 2,
plasma protein.
Length = 467
Score = 200 bits (489), Expect = 8e-51
Identities = 80/136 (58%), Positives = 108/136 (79%), Gaps = 1/136 (0%)
Frame = +3
Query: 300 NSKKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSL-KYTLF 476
++ +F+P W+ LD R+LP W+D+AK GIF+HWGV+SVPS+GSEWFW W+ + KY F
Sbjct: 30 SATRFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEF 89
Query: 477 MDKNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFS 656
M NYPP F Y++F P+FTA+FF+ QWA +F +GAKYIVLTSKHHEGFTL+ S+ S++
Sbjct: 90 MKDNYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWN 149
Query: 657 WNAVEVGPKHDLVKDL 704
WNA++ GPK D+VK+L
Sbjct: 150 WNAIDEGPKRDIVKEL 165
>BC003060-1|AAH03060.1| 467|Homo sapiens fucosidase, alpha-L- 2,
plasma protein.
Length = 467
Score = 200 bits (489), Expect = 8e-51
Identities = 80/136 (58%), Positives = 108/136 (79%), Gaps = 1/136 (0%)
Frame = +3
Query: 300 NSKKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSL-KYTLF 476
++ +F+P W+ LD R+LP W+D+AK GIF+HWGV+SVPS+GSEWFW W+ + KY F
Sbjct: 30 SATRFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEF 89
Query: 477 MDKNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFS 656
M NYPP F Y++F P+FTA+FF+ QWA +F +GAKYIVLTSKHHEGFTL+ S+ S++
Sbjct: 90 MKDNYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWN 149
Query: 657 WNAVEVGPKHDLVKDL 704
WNA++ GPK D+VK+L
Sbjct: 150 WNAIDEGPKRDIVKEL 165
>AY358551-1|AAQ88915.1| 467|Homo sapiens RPQE227 protein.
Length = 467
Score = 200 bits (489), Expect = 8e-51
Identities = 80/136 (58%), Positives = 108/136 (79%), Gaps = 1/136 (0%)
Frame = +3
Query: 300 NSKKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSL-KYTLF 476
++ +F+P W+ LD R+LP W+D+AK GIF+HWGV+SVPS+GSEWFW W+ + KY F
Sbjct: 30 SATRFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEF 89
Query: 477 MDKNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFS 656
M NYPP F Y++F P+FTA+FF+ QWA +F +GAKYIVLTSKHHEGFTL+ S+ S++
Sbjct: 90 MKDNYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWN 149
Query: 657 WNAVEVGPKHDLVKDL 704
WNA++ GPK D+VK+L
Sbjct: 150 WNAIDEGPKRDIVKEL 165
>AL031320-8|CAB53746.1| 467|Homo sapiens RP1-20N2.5 protein.
Length = 467
Score = 200 bits (489), Expect = 8e-51
Identities = 80/136 (58%), Positives = 108/136 (79%), Gaps = 1/136 (0%)
Frame = +3
Query: 300 NSKKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSL-KYTLF 476
++ +F+P W+ LD R+LP W+D+AK GIF+HWGV+SVPS+GSEWFW W+ + KY F
Sbjct: 30 SATRFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEF 89
Query: 477 MDKNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFS 656
M NYPP F Y++F P+FTA+FF+ QWA +F +GAKYIVLTSKHHEGFTL+ S+ S++
Sbjct: 90 MKDNYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWN 149
Query: 657 WNAVEVGPKHDLVKDL 704
WNA++ GPK D+VK+L
Sbjct: 150 WNAIDEGPKRDIVKEL 165
>AK075458-1|BAC11633.1| 467|Homo sapiens protein ( Homo sapiens
cDNA PSEC0151 fis, clone PLACE1007878, highly similar to
Fucosidase, alpha-L- 2, plasma. ).
Length = 467
Score = 200 bits (489), Expect = 8e-51
Identities = 80/136 (58%), Positives = 108/136 (79%), Gaps = 1/136 (0%)
Frame = +3
Query: 300 NSKKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSL-KYTLF 476
++ +F+P W+ LD R+LP W+D+AK GIF+HWGV+SVPS+GSEWFW W+ + KY F
Sbjct: 30 SATRFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEF 89
Query: 477 MDKNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFS 656
M NYPP F Y++F P+FTA+FF+ QWA +F +GAKYIVLTSKHHEGFTL+ S+ S++
Sbjct: 90 MKDNYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWN 149
Query: 657 WNAVEVGPKHDLVKDL 704
WNA++ GPK D+VK+L
Sbjct: 150 WNAIDEGPKRDIVKEL 165
>M80815-1|AAA52481.1| 461|Homo sapiens alpha-L-fucosidase protein.
Length = 461
Score = 200 bits (488), Expect = 1e-50
Identities = 80/134 (59%), Positives = 104/134 (77%), Gaps = 1/134 (0%)
Frame = +3
Query: 306 KKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKG-GSLKYTLFMD 482
+++ PDW LD+R LP W+D AK G+F+HWGV+SVP++GSEWFW +W+G G +Y FM
Sbjct: 30 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMR 89
Query: 483 KNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFSWN 662
NYPPGFSY +F P FTA FF P++WA LF AGAKY+VLT+KHHEGFT +PS S++WN
Sbjct: 90 DNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWN 149
Query: 663 AVEVGPKHDLVKDL 704
+ +VGP DLV +L
Sbjct: 150 SKDVGPHRDLVGEL 163
>M29877-1|AAA35519.1| 461|Homo sapiens protein ( Human
alpha-L-fucosidase, complete cds. ).
Length = 461
Score = 200 bits (488), Expect = 1e-50
Identities = 80/134 (59%), Positives = 104/134 (77%), Gaps = 1/134 (0%)
Frame = +3
Query: 306 KKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKG-GSLKYTLFMD 482
+++ PDW LD+R LP W+D AK G+F+HWGV+SVP++GSEWFW +W+G G +Y FM
Sbjct: 30 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMR 89
Query: 483 KNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFSWN 662
NYPPGFSY +F P FTA FF P++WA LF AGAKY+VLT+KHHEGFT +PS S++WN
Sbjct: 90 DNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWN 149
Query: 663 AVEVGPKHDLVKDL 704
+ +VGP DLV +L
Sbjct: 150 SKDVGPHRDLVGEL 163
>BC017338-1|AAH17338.1| 461|Homo sapiens fucosidase, alpha-L- 1,
tissue protein.
Length = 461
Score = 200 bits (488), Expect = 1e-50
Identities = 80/134 (59%), Positives = 104/134 (77%), Gaps = 1/134 (0%)
Frame = +3
Query: 306 KKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKG-GSLKYTLFMD 482
+++ PDW LD+R LP W+D AK G+F+HWGV+SVP++GSEWFW +W+G G +Y FM
Sbjct: 30 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMR 89
Query: 483 KNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFSWN 662
NYPPGFSY +F P FTA FF P++WA LF AGAKY+VLT+KHHEGFT +PS S++WN
Sbjct: 90 DNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWN 149
Query: 663 AVEVGPKHDLVKDL 704
+ +VGP DLV +L
Sbjct: 150 SKDVGPHRDLVGEL 163
>AL590728-1|CAH74004.2| 466|Homo sapiens fucosidase, alpha-L-1,
tissue protein.
Length = 466
Score = 200 bits (488), Expect = 1e-50
Identities = 80/134 (59%), Positives = 104/134 (77%), Gaps = 1/134 (0%)
Frame = +3
Query: 306 KKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKG-GSLKYTLFMD 482
+++ PDW LD+R LP W+D AK G+F+HWGV+SVP++GSEWFW +W+G G +Y FM
Sbjct: 35 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMR 94
Query: 483 KNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFSWN 662
NYPPGFSY +F P FTA FF P++WA LF AGAKY+VLT+KHHEGFT +PS S++WN
Sbjct: 95 DNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWN 154
Query: 663 AVEVGPKHDLVKDL 704
+ +VGP DLV +L
Sbjct: 155 SKDVGPHRDLVGEL 168
>AB074175-1|BAE45738.1| 466|Homo sapiens alpha-L-fucosidase
protein.
Length = 466
Score = 200 bits (488), Expect = 1e-50
Identities = 80/134 (59%), Positives = 104/134 (77%), Gaps = 1/134 (0%)
Frame = +3
Query: 306 KKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKG-GSLKYTLFMD 482
+++ PDW LD+R LP W+D AK G+F+HWGV+SVP++GSEWFW +W+G G +Y FM
Sbjct: 35 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMR 94
Query: 483 KNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFSWN 662
NYPPGFSY +F P FTA FF P++WA LF AGAKY+VLT+KHHEGFT +PS S++WN
Sbjct: 95 DNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWN 154
Query: 663 AVEVGPKHDLVKDL 704
+ +VGP DLV +L
Sbjct: 155 SKDVGPHRDLVGEL 168
>AL031320-9|CAD92495.1| 165|Homo sapiens RP1-20N2.5 protein.
Length = 165
Score = 163 bits (396), Expect = 2e-39
Identities = 67/121 (55%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Frame = +3
Query: 300 NSKKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSL-KYTLF 476
++ +F+P W+ LD R+LP W+D+AK GIF+HWGV+SVPS+GSEWFW W+ + KY F
Sbjct: 30 SATRFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEF 89
Query: 477 MDKNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFS 656
M NYPP F Y++F P+FTA+FF+ QWA +F +GAKYIVLTSKHHE + SF
Sbjct: 90 MKDNYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEA----TCRDSFM 145
Query: 657 W 659
W
Sbjct: 146 W 146
>AK092914-1|BAC04002.1| 444|Homo sapiens protein ( Homo sapiens
cDNA FLJ35595 fis, clone SPLEN2008007, highly similar to
TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (EC 3.2.1.51). ).
Length = 444
Score = 141 bits (342), Expect = 5e-33
Identities = 62/133 (46%), Positives = 86/133 (64%)
Frame = +3
Query: 306 KKFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNWKGGSLKYTLFMDK 485
+++ PDW LD+R LP W++ K G+F+HWGV+SVP++GSEWFW +W+G
Sbjct: 35 RRYTPDWPSLDSRPLPAWFNEVKFGVFIHWGVFSVPAWGSEWFWWHWQG----------- 83
Query: 486 NYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVLTSKHHEGFTLFPSKRSFSWNA 665
E P + FF P++WA LF GAKY+VLT+KHHEGFT +PS S++WN+
Sbjct: 84 ---------EGRPQY-QRFFHPEEWADLFQATGAKYVVLTTKHHEGFTNWPSPVSWNWNS 133
Query: 666 VEVGPKHDLVKDL 704
+VGP DLV +L
Sbjct: 134 KDVGPHRDLVGEL 146
>M10355-1|AAA52482.1| 353|Homo sapiens FUCA1 protein.
Length = 353
Score = 129 bits (311), Expect = 3e-29
Identities = 55/94 (58%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Frame = +3
Query: 426 EWFWSNWKG-GSLKYTLFMDKNYPPGFSYQEFAPMFTAEFFDPQQWAQLFSKAGAKYIVL 602
E+ W +W+G G +Y FM NYPPGFSY +F P FTA FF P++WA LF AGAKY+VL
Sbjct: 1 EFLWWHWQGEGRPQYQRFMRDNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVL 60
Query: 603 TSKHHEGFTLFPSKRSFSWNAVEVGPKHDLVKDL 704
T+KHHEGFT +PS S++WN+ +VGP DLV +L
Sbjct: 61 TTKHHEGFTNWPSPVSWNWNSKDVGPHRDLVGEL 94
>BC028034-1|AAH28034.1| 277|Homo sapiens MAPK15 protein protein.
Length = 277
Score = 33.1 bits (72), Expect = 2.8
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 490 ILQDFHTRSLHRCLQQNSSILSSGLNFSQKQEPNTLFLPASIMKVSHCSHRNARSVGTL 666
+LQD H RS+ L + + L SG + Q+P+ + L A+ V C ARS+G L
Sbjct: 125 LLQDVHVRSIFYQLLRATRFLHSGHVVHRDQKPSNVLLDAN-CTVKLCDFGLARSLGDL 182
>AY065978-1|AAL40897.1| 544|Homo sapiens extracellular
signal-regulated kinase 8 protein.
Length = 544
Score = 33.1 bits (72), Expect = 2.8
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 490 ILQDFHTRSLHRCLQQNSSILSSGLNFSQKQEPNTLFLPASIMKVSHCSHRNARSVGTL 666
+LQD H RS+ L + + L SG + Q+P+ + L A+ V C ARS+G L
Sbjct: 108 LLQDVHVRSIFYQLLRATRFLHSGHVVHRDQKPSNVLLDAN-CTVKLCDFGLARSLGDL 165
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 32.7 bits (71), Expect = 3.7
Identities = 41/157 (26%), Positives = 47/157 (29%), Gaps = 11/157 (7%)
Frame = +1
Query: 1009 TSXGXXVTFSPXXPXXPGXXXFXGNPFXPLPSXVXG------ALNXXXPX*XFXXRRPPP 1170
TS G + P P PG G P P P+ G LN P R PP
Sbjct: 810 TSEGSSMLTVPGPPGPPGAMGPPGPPGAPGPAGPAGLPGHQEVLNLQGPPGPPGPRGPPG 869
Query: 1171 GGAXXPXAPKGPSXFPKSXXXGSXXXXPXPGXTXXXXXXXXXSQXXXXSPXXPRX----P 1338
P P+GP P G PG P P+ P
Sbjct: 870 PSIPGPPGPRGP---PGEGLPGPPGP---PGSFLSNSETFLSGPPGPPGPPGPKGDQGDP 923
Query: 1339 XXPXXSG-PXGAAXGRXSFPRXLXXXWXPPGXAXPPG 1446
P G P G + G S + PPG PPG
Sbjct: 924 GVPGALGIPSGPSEGGSSSTMYVSGPPGPPGPPGPPG 960
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 31.9 bits (69), Expect = 6.5
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
Frame = -3
Query: 1205 GPFGAXGXXAPPG----GGRLXXNXQXGFXKFRAPXTXXGXGXKGFPXKXXXPGXXGXXG 1038
GP G G PPG GG+ G + AP G +GFP + PG G G
Sbjct: 591 GPSGFQGLPGPPGPPGEGGKPGDQGVPG--EAGAPGLVGPRGERGFPGERGSPGAQGLQG 648
Query: 1037 EKVTXXPXXVDAPR 996
+ D P+
Sbjct: 649 PRGLPGTPGTDGPK 662
>X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for
alpha-1 type II collagen. ).
Length = 1418
Score = 31.9 bits (69), Expect = 6.5
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
Frame = -3
Query: 1205 GPFGAXGXXAPPG----GGRLXXNXQXGFXKFRAPXTXXGXGXKGFPXKXXXPGXXGXXG 1038
GP G G PPG GG+ G + AP G +GFP + PG G G
Sbjct: 591 GPSGFQGLPGPPGPPGEGGKPGDQGVPG--EAGAPGLVGPRGERGFPGERGSPGAQGLQG 648
Query: 1037 EKVTXXPXXVDAPR 996
+ D P+
Sbjct: 649 PRGLPGTPGTDGPK 662
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 31.9 bits (69), Expect = 6.5
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
Frame = -3
Query: 1205 GPFGAXGXXAPPG----GGRLXXNXQXGFXKFRAPXTXXGXGXKGFPXKXXXPGXXGXXG 1038
GP G G PPG GG+ G + AP G +GFP + PG G G
Sbjct: 660 GPSGFQGLPGPPGPPGEGGKPGDQGVPG--EAGAPGLVGPRGERGFPGERGSPGAQGLQG 717
Query: 1037 EKVTXXPXXVDAPR 996
+ D P+
Sbjct: 718 PRGLPGTPGTDGPK 731
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 31.9 bits (69), Expect = 6.5
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
Frame = -3
Query: 1205 GPFGAXGXXAPPG----GGRLXXNXQXGFXKFRAPXTXXGXGXKGFPXKXXXPGXXGXXG 1038
GP G G PPG GG+ G + AP G +GFP + PG G G
Sbjct: 660 GPSGFQGLPGPPGPPGEGGKPGDQGVPG--EAGAPGLVGPRGERGFPGERGSPGAQGLQG 717
Query: 1037 EKVTXXPXXVDAPR 996
+ D P+
Sbjct: 718 PRGLPGTPGTDGPK 731
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 31.5 bits (68), Expect = 8.6
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = +1
Query: 1315 SPXXPRX----PXXPXXSGPXGAAXGRXSFPRXLXXXWXPPGXAXPPGXXPGRXXXGP 1476
SP PR P P SGP G A P+ + PPG PPG R GP
Sbjct: 1221 SPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDP-GPPGDQGPPGPDGPRGAPGP 1277
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 31.5 bits (68), Expect = 8.6
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = -3
Query: 1205 GPFGAXGXXAPPGG-GRLXXNXQXGFXKFRAPXTXXGX-GXKGFPXKXXXPGXXGXXGEK 1032
GP G G PPG G+ G P G G +GFP PG G GE+
Sbjct: 483 GPHGIQGPIGPPGEEGKRGPRGDPGTLGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGER 542
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain
protein.
Length = 1690
Score = 31.5 bits (68), Expect = 8.6
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = +1
Query: 1315 SPXXPRX----PXXPXXSGPXGAAXGRXSFPRXLXXXWXPPGXAXPPGXXPGRXXXGP 1476
SP PR P P SGP G A P+ + PPG PPG R GP
Sbjct: 1221 SPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDP-GPPGDQGPPGPDGPRGAPGP 1277
>X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (714
AA) protein.
Length = 714
Score = 31.5 bits (68), Expect = 8.6
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = -3
Query: 1205 GPFGAXGXXAPPGG-GRLXXNXQXGF-XKFRAPXTXXGXGXKGFPXKXXXPGXXGXXGEK 1032
GP G G PPG G G + AP G +GFP + PG G G +
Sbjct: 160 GPSGFQGLPGPPGPPGEAGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPR 219
Query: 1031 VTXXPXXVDAPR 996
D P+
Sbjct: 220 GLPGTPGTDGPK 231
>X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for
pro-alpha 2 (V) collagen chain. ).
Length = 1099
Score = 31.5 bits (68), Expect = 8.6
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = -3
Query: 1205 GPFGAXGXXAPPGG-GRLXXNXQXGFXKFRAPXTXXGX-GXKGFPXKXXXPGXXGXXGEK 1032
GP G G PPG G+ G P G G +GFP PG G GE+
Sbjct: 86 GPHGIQGPIGPPGEEGKRGPRGDPGTLGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGER 145
>D17391-1|BAA04214.1| 472|Homo sapiens alpha 4(IV) collagen protein.
Length = 472
Score = 31.5 bits (68), Expect = 8.6
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = +1
Query: 1315 SPXXPRX----PXXPXXSGPXGAAXGRXSFPRXLXXXWXPPGXAXPPGXXPGRXXXGP 1476
SP PR P P SGP G A P+ + PPG PPG R GP
Sbjct: 3 SPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDP-GPPGDQGPPGPDGPRGAPGP 59
>AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen alpha
2 chain protein.
Length = 1347
Score = 31.5 bits (68), Expect = 8.6
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = -3
Query: 1205 GPFGAXGXXAPPGG-GRLXXNXQXGFXKFRAPXTXXGX-GXKGFPXKXXXPGXXGXXGEK 1032
GP G G PPG G+ G P G G +GFP PG G GE+
Sbjct: 334 GPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGER 393
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 31.5 bits (68), Expect = 8.6
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = +1
Query: 1315 SPXXPRX----PXXPXXSGPXGAAXGRXSFPRXLXXXWXPPGXAXPPGXXPGRXXXGP 1476
SP PR P P SGP G A P+ + PPG PPG R GP
Sbjct: 1221 SPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDP-GPPGDQGPPGPDGPRGAPGP 1277
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 31.5 bits (68), Expect = 8.6
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = -3
Query: 1205 GPFGAXGXXAPPGG-GRLXXNXQXGFXKFRAPXTXXGX-GXKGFPXKXXXPGXXGXXGEK 1032
GP G G PPG G+ G P G G +GFP PG G GE+
Sbjct: 489 GPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGER 548
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,170,577
Number of Sequences: 237096
Number of extensions: 4088539
Number of successful extensions: 8791
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 6796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8707
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23193116150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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