Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_D09_e644_07.seq
         (1534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   1.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   1.9  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    27   1.9  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -2

Query: 357 RCTSESTDPPPVVANFT*QVTS-T*IYFSTACPLFPGTSTYSVFSSTCGRSARNTQASPN 181
           RC+ +S   PP   + +   TS T +  +TA P+ P  +T +  +ST G SA    +SP 
Sbjct: 6   RCSPQSAPSPPHHHHSSQSPTSTTTVTMATASPV-PACTTTTSTTSTSGASA---ASSPT 61

Query: 180 KPPFPVIENFIP 145
           +    V+    P
Sbjct: 62  RDEMSVVVPISP 73


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -2

Query: 357 RCTSESTDPPPVVANFT*QVTS-T*IYFSTACPLFPGTSTYSVFSSTCGRSARNTQASPN 181
           RC+ +S   PP   + +   TS T +  +TA P+ P  +T +  +ST G SA    +SP 
Sbjct: 6   RCSPQSAPSPPHHHHSSQSPTSTTTVTMATASPV-PACTTTTSTTSTSGASA---ASSPT 61

Query: 180 KPPFPVIENFIP 145
           +    V+    P
Sbjct: 62  RDEMSVVVPISP 73


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 61  RXSARGRKLFLVRFASRGHRHGTARYSSRNEILYYRKR 174
           R   RG   F++  AS  HR+   RY S  E LY R++
Sbjct: 163 RNEPRGVSKFIL--ASEPHRYVVQRYESSEEELYARRQ 198


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,125,126
Number of Sequences: 2352
Number of extensions: 23134
Number of successful extensions: 100
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 180032985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)