BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_D08_e636_08.seq
(1514 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 63 5e-10
03_05_0875 - 28434894-28435082,28435173-28435247,28435399-284354... 51 3e-06
01_05_0542 + 23086931-23087014,23087116-23087206,23087624-230876... 49 1e-05
02_05_0435 - 28958422-28958665,28959328-28959462,28960056-289602... 48 2e-05
01_06_1276 - 35918954-35919106,35919220-35919325,35919477-359195... 44 3e-04
12_02_0244 - 16241243-16241279,16241781-16241848,16241930-162420... 43 6e-04
04_04_1057 - 30451759-30452523,30452627-30452701,30453180-304532... 40 0.005
07_03_1687 - 28673491-28674822 37 0.036
01_01_0710 + 5492389-5492745,5493664-5493948,5494121-5494438,549... 34 0.26
05_05_0153 - 22766805-22767023,22767662-22767940,22768294-227684... 34 0.34
01_05_0223 - 19467303-19467326,19467485-19467601,19468143-194682... 34 0.34
12_01_0206 + 1555278-1555448,1555710-1555772,1556236-1556307,155... 33 0.59
11_01_0202 + 1606317-1606487,1606743-1606805,1607045-1607116,160... 33 0.59
02_01_0581 - 4307182-4307358,4307387-4307461,4307559-4307621,430... 33 0.59
07_03_1614 + 28152812-28153204,28153301-28153585,28153676-281539... 33 0.78
07_03_0543 + 19272389-19272534,19273337-19273496,19273584-192737... 32 1.0
03_02_0996 - 13082540-13082818,13083107-13083221,13084135-130842... 32 1.0
01_01_0752 - 5808798-5810183 32 1.0
12_02_0105 + 13647356-13648534 31 1.8
06_03_0701 - 23655762-23655857,23656067-23656141,23656245-236563... 31 1.8
05_03_0555 + 15425486-15426856 31 1.8
04_03_0080 + 10797919-10798254,10799629-10799727 31 1.8
03_02_0818 - 11496429-11496767,11496847-11496903,11497040-114971... 31 1.8
11_01_0083 - 629885-631189 31 2.4
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312... 31 2.4
12_02_0106 + 13654686-13655789 31 3.2
12_01_0084 - 678324-679643 31 3.2
09_04_0135 - 14954060-14954156,14955027-14956024 31 3.2
08_01_0090 - 649631-651162,653189-655019,655313-655365,655731-65... 31 3.2
03_01_0187 - 1492732-1492935,1493708-1493765,1494871-1494947,149... 31 3.2
10_01_0304 - 3356541-3357518 30 4.2
07_03_1138 - 24240155-24240219,24240427-24240559,24240640-242411... 30 4.2
05_03_0565 - 15509949-15511304 30 4.2
01_06_0780 - 31938064-31938127,31940191-31941743 30 4.2
10_01_0306 - 3372952-3373929 30 5.5
10_01_0302 + 3320730-3321710 30 5.5
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 30 5.5
02_03_0286 + 17317316-17317516,17317610-17318245 30 5.5
09_03_0145 - 12749288-12751510 29 7.3
07_01_0363 - 2675951-2676049,2676146-2676279,2676362-2676395,267... 29 7.3
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218... 29 7.3
01_04_0008 + 15041682-15041909,15042035-15042319,15042406-150427... 29 7.3
07_03_1737 + 29137654-29137842,29137999-29138061,29138196-291382... 29 9.6
03_05_0936 - 28955486-28955683,28956320-28956424,28956550-289566... 29 9.6
02_01_0566 - 4144104-4144230,4144492-4144649,4145770-4146885 29 9.6
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 63.3 bits (147), Expect = 5e-10
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Frame = +3
Query: 369 LTDNWDDVEGYYRINIGELINKKYTIKDTLGQGVFANVARAQD----NQENXIVAIKIIR 536
L DNWDD EGYY GEL++ +Y I G+GVF+ V RA+D + VAIKIIR
Sbjct: 586 LHDNWDDAEGYYTYRFGELLDGRYEITAAHGKGVFSTVVRAKDLKAGKDDPEEVAIKIIR 645
Query: 537 NXXLLY 554
N +Y
Sbjct: 646 NNETMY 651
>03_05_0875 -
28434894-28435082,28435173-28435247,28435399-28435490,
28435721-28435835,28436019-28436188,28436237-28436310,
28436397-28436553,28436658-28436730,28436898-28436960,
28437067-28437341,28437710-28437816,28437884-28438788,
28439742-28440032
Length = 861
Score = 50.8 bits (116), Expect = 3e-06
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = +3
Query: 369 LTDNWDDVEGYYRINIGELINKKYTIKDTLGQGVFANVARAQD--NQENXI--VAIKIIR 536
L DNW+D EGYY + GE++ +Y I G+GVF+ V A+D Q++ VAIKII
Sbjct: 560 LHDNWEDEEGYYIYHFGEVLQGRYEITARRGKGVFSTVVHAKDLKAQKDGCREVAIKIIC 619
Query: 537 NXXLLYNN 560
N Y +
Sbjct: 620 NNIEKYRS 627
>01_05_0542 +
23086931-23087014,23087116-23087206,23087624-23087650,
23087742-23087895,23087958-23088023,23088249-23088292,
23088592-23088683,23088779-23088926,23089356-23089420,
23089495-23089592,23090368-23090392
Length = 297
Score = 48.8 bits (111), Expect = 1e-05
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +3
Query: 384 DDVEGYYRINIGELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRN 539
DD +G+Y ++GE +N++Y I +G+G F V D + + VAIK++R+
Sbjct: 41 DDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRS 92
>02_05_0435 -
28958422-28958665,28959328-28959462,28960056-28960211,
28960287-28961092,28961177-28961254,28961809-28961883,
28962127-28962215,28962735-28962843,28963007-28963086,
28963739-28963794,28963876-28963958,28964049-28964118,
28964200-28964309,28964395-28964548,28965183-28965382,
28966175-28966348,28969080-28969277,28970564-28970791
Length = 1014
Score = 48.0 bits (109), Expect = 2e-05
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +3
Query: 420 ELINKK----YTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLLY 554
EL+NKK Y IK+ LGQG F VA+ D + N VA+K+I+N Y
Sbjct: 258 ELVNKKSDRRYVIKEMLGQGTFGQVAKCWDGETNSYVAVKVIKNQPAFY 306
>01_06_1276 -
35918954-35919106,35919220-35919325,35919477-35919574,
35919693-35919757,35919877-35920033,35920177-35920268,
35920379-35920493,35920574-35920622,35920705-35920858,
35920993-35921019,35921530-35921707,35922326-35922685,
35922979-35922987,35923170-35923238
Length = 543
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 384 DDVEGYYRINIGELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRN 539
DD +G+Y +GE + +Y I +G+G F V D + VAIKI+R+
Sbjct: 188 DDKDGHYVFAVGENLTPRYRILSKMGEGTFGQVLECWDLEHQETVAIKIVRS 239
>12_02_0244 -
16241243-16241279,16241781-16241848,16241930-16242032,
16242095-16242256,16242305-16242369,16242547-16242612,
16242738-16242829,16243029-16243134,16243231-16243279,
16243387-16243540,16243661-16243687,16243797-16243959,
16244621-16244701
Length = 390
Score = 43.2 bits (97), Expect = 6e-04
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 384 DDVEGYYRINIGELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIR 536
DD +G++ +G+ + +Y I +G+G F V D + +VAIKIIR
Sbjct: 64 DDKDGHFVFAVGDNLTPRYRINAKMGEGTFGQVLECWDRERKEMVAIKIIR 114
>04_04_1057 -
30451759-30452523,30452627-30452701,30453180-30453254,
30453503-30453591,30454058-30454157,30454244-30454388,
30454609-30454658,30455033-30455114,30455200-30455282,
30455360-30455429,30455523-30455632,30455719-30455872,
30456639-30456796,30457338-30457517
Length = 711
Score = 39.9 bits (89), Expect = 0.005
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 438 YTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLLYN 557
+ +K+ LGQG F V + D + N VA+K+I+N Y+
Sbjct: 114 FVVKEMLGQGTFGQVVKCLDTETNDYVAVKVIKNQPAFYH 153
>07_03_1687 - 28673491-28674822
Length = 443
Score = 37.1 bits (82), Expect = 0.036
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 417 GELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLL 551
G ++ KKY + LGQG FA V A++ + + VAIK+I +L
Sbjct: 6 GNMLMKKYEMGKLLGQGTFAKVYHARNTETSESVAIKMIDKEKVL 50
>01_01_0710 +
5492389-5492745,5493664-5493948,5494121-5494438,
5494900-5495127,5495884-5495984,5496493-5496604,
5496654-5496662,5496897-5497340,5497649-5497909
Length = 704
Score = 34.3 bits (75), Expect = 0.26
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +3
Query: 450 DTLGQGVFANVARAQDNQENXIVAIKIIR 536
D +GQG ++NV RA+D ++ IVA+K +R
Sbjct: 118 DKIGQGTYSNVYRARDLEKEKIVALKKVR 146
>05_05_0153 -
22766805-22767023,22767662-22767940,22768294-22768401,
22768500-22768779,22768871-22769174,22769367-22769975,
22770186-22770411
Length = 674
Score = 33.9 bits (74), Expect = 0.34
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 402 YRINIGELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRN 539
+ I + ++ +Y I + LG F+ V RAQD V +KII+N
Sbjct: 389 FPIVMNSVVGGRYRITEYLGSAAFSKVVRAQDLWTGMDVCLKIIKN 434
>01_05_0223 -
19467303-19467326,19467485-19467601,19468143-19468256,
19468575-19468697,19468846-19468935,19469765-19469890,
19471942-19471995,19472068-19472142,19472222-19472329,
19472556-19472627,19473375-19473545
Length = 357
Score = 33.9 bits (74), Expect = 0.34
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 435 KYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLL 551
KY + T+G+G FA V AQ+ + VA+K++ +L
Sbjct: 12 KYEVGRTIGEGTFAKVKFAQNTESGESVAMKVVDRSSIL 50
>12_01_0206 +
1555278-1555448,1555710-1555772,1556236-1556307,
1556430-1556537,1556644-1556724,1556861-1556914,
1557020-1557145,1557228-1557317,1557603-1557725,
1557831-1557938,1558287-1558400,1558530-1558586,
1558667-1558741,1558915-1558989
Length = 438
Score = 33.1 bits (72), Expect = 0.59
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 435 KYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLL 551
KY + T+G+G FA V A+D + VAIKI+ +L
Sbjct: 12 KYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVL 50
>11_01_0202 +
1606317-1606487,1606743-1606805,1607045-1607116,
1607244-1607351,1607497-1607538,1607965-1608018,
1608130-1608255,1608338-1608427,1608735-1608857,
1608963-1609070,1609412-1609573,1609655-1609711,
1609792-1609884
Length = 422
Score = 33.1 bits (72), Expect = 0.59
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 435 KYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLL 551
KY + T+G+G FA V A+D + VAIKI+ +L
Sbjct: 12 KYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVL 50
>02_01_0581 -
4307182-4307358,4307387-4307461,4307559-4307621,
4307715-4307819,4307917-4308024,4308123-4308260,
4308357-4308446,4308533-4308658,4308728-4308781,
4308865-4308936,4309060-4309167,4309272-4309343,
4309456-4309518,4309747-4309908
Length = 470
Score = 33.1 bits (72), Expect = 0.59
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 435 KYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLLYNN 560
+Y + T+G G FA V A D VA+K+I ++ NN
Sbjct: 9 RYRVGRTIGAGTFAKVRLAVDADTGATVAVKVIDKRMVIRNN 50
>07_03_1614 +
28152812-28153204,28153301-28153585,28153676-28153993,
28154657-28154884,28155390-28155490,28156204-28156321,
28156445-28156726
Length = 574
Score = 32.7 bits (71), Expect = 0.78
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 450 DTLGQGVFANVARAQDNQENXIVAIKIIR 536
D +GQG ++NV +A+D+ IVA+K +R
Sbjct: 130 DKIGQGTYSNVYKARDSVSGKIVALKKVR 158
>07_03_0543 +
19272389-19272534,19273337-19273496,19273584-19273741,
19273852-19273945,19274082-19274198,19275119-19275229,
19275309-19275396,19275615-19275718,19275796-19275867,
19275950-19276039,19276151-19276308,19276746-19276752,
19277140-19277194,19277273-19277421,19277543-19277664,
19277916-19278105
Length = 606
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 405 RINIGELINKKYTIKDTLGQGVFANVARAQ-DNQENXIVAIKIIRN----XXLLYNNRXX 569
R + EL +KY IK + G G FA V +A D +VA+KI + +Y
Sbjct: 285 RNKVIELGGRKYQIKGSPGTGAFAKVYKASVDGNTEDLVALKIQKPPFPWEFYMYRQLDT 344
Query: 570 RXCDFER 590
R D ER
Sbjct: 345 RVSDIER 351
>03_02_0996 -
13082540-13082818,13083107-13083221,13084135-13084235,
13084890-13085117,13085789-13086106,13086200-13086484,
13086566-13086913
Length = 557
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 450 DTLGQGVFANVARAQDNQENXIVAIKIIR 536
D +GQG ++NV +A+D IVA+K +R
Sbjct: 115 DKIGQGTYSNVYKARDTATGKIVALKKVR 143
>01_01_0752 - 5808798-5810183
Length = 461
Score = 32.3 bits (70), Expect = 1.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 423 LINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLL 551
++ +Y + LGQG FA V A++ N VAIK+I +L
Sbjct: 7 ILMNRYELGRMLGQGTFAKVYHARNLASNQSVAIKVIDKEKVL 49
>12_02_0105 + 13647356-13648534
Length = 392
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 411 NIGELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKII 533
+ G+ I +Y +G G F V RA DN+ IVA+K +
Sbjct: 40 SFGDPIGGRYQRLAVIGSGSFGRVYRAVDNRTGEIVAVKCL 80
>06_03_0701 -
23655762-23655857,23656067-23656141,23656245-23656301,
23656385-23656501,23657286-23657405,23657491-23657613,
23657967-23658056,23658184-23658309,23658809-23658901,
23658947-23659021,23659115-23659222,23659481-23659552,
23659673-23659735,23660850-23661017
Length = 460
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 435 KYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLLYNNR 563
+Y + T+GQG FA V A D VA+K++ +L N+R
Sbjct: 11 RYEVGRTIGQGTFAKVKFAVDADTGAAVAMKVLDKDTIL-NHR 52
>05_03_0555 + 15425486-15426856
Length = 456
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 417 GELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKII 533
G ++ ++Y I LGQG FA V ++ + VAIK+I
Sbjct: 7 GNILLRRYEIGKLLGQGTFAKVYHGRNIVTSQSVAIKVI 45
>04_03_0080 + 10797919-10798254,10799629-10799727
Length = 144
Score = 31.5 bits (68), Expect = 1.8
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -2
Query: 1513 SXXXPRXGXXLXXXXVGXGGRPXXXXPXXGGXGXXKGXPGGXGXLRRXEXGXVXR 1349
S PR G GG GG G +G GG LR E V R
Sbjct: 11 STAAPREETTAAARGGGDGGDGSARGGGDGGGGSVRGRSGGAAALREEEATAVTR 65
>03_02_0818 -
11496429-11496767,11496847-11496903,11497040-11497153,
11497298-11497408,11497502-11497624,11497918-11498007,
11498088-11498213,11498317-11498370,11498464-11498544,
11498626-11498733,11498852-11498923,11499031-11499093,
11500003-11500194
Length = 509
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 435 KYTIKDTLGQGVFANVARAQDNQENXIVAIKII 533
KY + T+G+G FA V A++ + + VAIKI+
Sbjct: 19 KYELGRTIGEGTFAKVRFAKNTENDEPVAIKIL 51
>11_01_0083 - 629885-631189
Length = 434
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 417 GELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLL 551
G+++ ++Y + LG+G F V A++ + N VAIK++ +L
Sbjct: 5 GKILMERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQIL 49
>02_03_0388 + 18429538-18430598,18430971-18431081,18431165-18431237,
18431513-18431695
Length = 475
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 1325 PPXASXXXPXHLPXFXPPEXPXPXGRAFXXPXPP 1426
PP AS P H P PP+ P P PP
Sbjct: 83 PPQASAPSPPHAPAPSPPQAPAMTPPQAPAPTPP 116
>12_02_0106 + 13654686-13655789
Length = 367
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 414 IGELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIR 536
+G+ I +Y +G G + NV RA + +VA+K +R
Sbjct: 49 LGDPIGGRYQRMSRIGSGTYGNVYRAVEISTGKVVAVKCLR 89
>12_01_0084 - 678324-679643
Length = 439
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 417 GELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLL 551
G+++ ++Y + LG+G F V A++ + N VAIK++ +L
Sbjct: 5 GKILMERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQVL 49
>09_04_0135 - 14954060-14954156,14955027-14956024
Length = 364
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 420 ELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXL 548
+L+ +Y + LGQG FA V +D + VAIK+I L
Sbjct: 16 KLVLGRYELGRLLGQGTFAKVYYGRDLRSGESVAIKVIDKARL 58
>08_01_0090 -
649631-651162,653189-655019,655313-655365,655731-655735,
656209-656411,656837-657292,657718-657805,657917-658017,
658404-658631,659128-659445,659528-659812,660148-660711
Length = 1887
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 450 DTLGQGVFANVARAQDNQENXIVAIKIIR 536
D +GQG +++V +A+D + IVA+K +R
Sbjct: 187 DKIGQGTYSSVYKARDLESGKIVALKKVR 215
>03_01_0187 -
1492732-1492935,1493708-1493765,1494871-1494947,
1495086-1495160,1495259-1495315,1495451-1495567,
1495805-1495915,1496029-1496151,1496304-1496393,
1496480-1496605,1496687-1496740,1496975-1497055,
1497147-1497254,1497443-1497514,1497626-1497688,
1498417-1498629
Length = 542
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 KYTIKDTLGQGVFANVARAQDNQENXIVAIKII-RNXXL 548
+Y + T+G+G FA V A+D + +AIK++ RN L
Sbjct: 26 RYELGKTIGEGSFAKVKVARDTRTGDTLAIKVLDRNHVL 64
>10_01_0304 - 3356541-3357518
Length = 325
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 438 YTIKDTLGQGVFANVARAQDNQENXIVAIK 527
Y D +GQG F V RA+D + +VA+K
Sbjct: 43 YERLDVVGQGAFGVVVRARDRRTGKVVALK 72
>07_03_1138 -
24240155-24240219,24240427-24240559,24240640-24241182,
24241306-24241411,24241630-24241727,24242289-24242516,
24242990-24243307,24243411-24243695,24243706-24243771,
24244337-24244738
Length = 747
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 441 TIKDTLGQGVFANVARAQDNQENXIVAIKIIR 536
T+ T+GQG +++V RA++ IVA+K +R
Sbjct: 152 TLSCTVGQGTYSSVFRARELDTGKIVALKKVR 183
>05_03_0565 - 15509949-15511304
Length = 451
Score = 30.3 bits (65), Expect = 4.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 420 ELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIR 536
+++ +Y + LGQG + V RA+D + VA+K IR
Sbjct: 20 KVLQGRYELGRVLGQGASSKVYRARDARTGAHVAVKAIR 58
>01_06_0780 - 31938064-31938127,31940191-31941743
Length = 538
Score = 30.3 bits (65), Expect = 4.2
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 417 GELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKII 533
G + KY + LGQG FA V +A+ + + VAIK++
Sbjct: 37 GGTVLGKYELGRVLGQGSFAKVYQARHLETDECVAIKVL 75
>10_01_0306 - 3372952-3373929
Length = 325
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 438 YTIKDTLGQGVFANVARAQDNQENXIVAIK 527
Y D +GQG F V RA+D + +VA+K
Sbjct: 43 YERLDVVGQGAFGVVLRARDRRTGKVVALK 72
>10_01_0302 + 3320730-3321710
Length = 326
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 438 YTIKDTLGQGVFANVARAQDNQENXIVAIK 527
Y D +GQG F V RA+D + +VA+K
Sbjct: 44 YERLDVVGQGAFGVVLRARDRRTGKVVALK 73
>06_03_0310 - 19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 1322 PPPXASXXXPXHLPXFXPPEXPXPXGRAFXXPXPPXXXAXSXXAAPXXH 1468
PPP A P P PP P P P P A A P H
Sbjct: 174 PPPQAPAPTPPQAPAPTPPRAPTPTPPQAPLPAPSKSRASQ--APPPAH 220
>02_03_0286 + 17317316-17317516,17317610-17318245
Length = 278
Score = 29.9 bits (64), Expect = 5.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 438 YTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLLYNNR 563
Y +TLG G + V RA+D + VA+K +R+ +NR
Sbjct: 37 YKRMETLGAGTYIVVYRARDRRTGETVAVKWLRDVAANPSNR 78
>09_03_0145 - 12749288-12751510
Length = 740
Score = 29.5 bits (63), Expect = 7.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 1386 PLPPGXPXLXPSPPXXGXXXXGRPPXP 1466
P PP P + P PP GRPP P
Sbjct: 31 PPPPPPPGIQPPPPALPGMPHGRPPPP 57
>07_01_0363 -
2675951-2676049,2676146-2676279,2676362-2676395,
2676485-2676604,2676720-2676836,2676924-2677043,
2677129-2677218,2677313-2677438,2677566-2677619,
2677856-2677936,2678025-2678132,2678218-2678289,
2678885-2678947,2679476-2679646
Length = 462
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 435 KYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRNXXLL 551
+Y + TLG+G FA V A++ VAIKI+ +L
Sbjct: 12 RYELGRTLGEGTFAKVKFARNADSGENVAIKILDKDKVL 50
>03_06_0003 +
30921197-30921388,30921514-30921632,30921742-30921811,
30922078-30922161,30922258-30922344,30922431-30922501,
30922648-30922702,30923374-30923509,30925009-30925103,
30925203-30925357,30925435-30925543,30925761-30925817,
30925913-30926027,30926177-30926264,30926738-30927501,
30927600-30927688,30928315-30928422,30928550-30928657,
30928887-30928977,30929235-30929287,30929557-30929712,
30930763-30930825,30931491-30931535,30932075-30932130,
30933051-30933132,30933238-30933354,30933428-30933530,
30933912-30934062,30934180-30934417,30934564-30934764,
30934850-30934935,30935036-30935135
Length = 1347
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 435 KYTIKDTLGQGVFANVARAQDNQENXIVAIKII 533
KY + LG+G + V +A+D + +VAIKII
Sbjct: 725 KYELLHELGKGSYGAVYKARDLRTQELVAIKII 757
>01_04_0008 +
15041682-15041909,15042035-15042319,15042406-15042723,
15044087-15044128,15045111-15045391,15045808-15045883,
15046196-15046296,15047971-15048088,15048872-15049186
Length = 587
Score = 29.5 bits (63), Expect = 7.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 456 LGQGVFANVARAQDNQENXIVAIKIIR 536
+G G ++NV RA+D IVA+K +R
Sbjct: 77 IGSGTYSNVYRARDTVSGRIVALKKVR 103
>07_03_1737 +
29137654-29137842,29137999-29138061,29138196-29138267,
29138411-29138518,29138615-29138695,29138818-29138871,
29138956-29139081,29139162-29139251,29139444-29139566,
29139667-29139777,29139927-29140040,29140214-29140270,
29140350-29140424,29140526-29140600
Length = 445
Score = 29.1 bits (62), Expect = 9.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 435 KYTIKDTLGQGVFANVARAQDNQENXIVAIKII 533
KY + +GQG FA V A++ + VAIKI+
Sbjct: 18 KYELGRAIGQGTFAKVRFAKNMETGDHVAIKIL 50
>03_05_0936 -
28955486-28955683,28956320-28956424,28956550-28956693,
28957078-28957356,28957480-28957587,28958288-28958567,
28958724-28960029,28961301-28962342
Length = 1153
Score = 29.1 bits (62), Expect = 9.6
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 402 YRINIGELINKKYTIKDTLGQGVFANVARAQDNQENXIVAIKIIRN 539
+ + + +I +Y + + LG F+ +A D V +KII+N
Sbjct: 792 FHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN 837
>02_01_0566 - 4144104-4144230,4144492-4144649,4145770-4146885
Length = 466
Score = 29.1 bits (62), Expect = 9.6
Identities = 14/52 (26%), Positives = 18/52 (34%)
Frame = +2
Query: 1250 PGXXXXVTFXXLGXPXXXGXIXRGPPPXASXXXPXHLPXFXPPEXPXPXGRA 1405
P + F L P PPP +S P + F PP P G +
Sbjct: 43 PQPKSALLFSSLPAPKSGPVFSAIPPPKSSSGNPKRVVQFRPPPIRQPTGES 94
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,220,450
Number of Sequences: 37544
Number of extensions: 443779
Number of successful extensions: 1632
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1537
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4861283252
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -