Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_D07_e628_07.seq
(1515 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 231 1e-60
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 231 1e-60
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 231 1e-60
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 231 1e-60
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 231 1e-60
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 231 1e-60
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 231 1e-60
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 231 1e-60
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 231 1e-60
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 231 1e-60
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 227 2e-59
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 153 2e-37
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 124 1e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 107 2e-23
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 88 1e-17
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 88 2e-17
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 88 2e-17
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 88 2e-17
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 82 9e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.014
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.014
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 33 0.40
AF045643-5|AAC02592.1| 607|Caenorhabditis elegans Hypothetical ... 33 0.70
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 8.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 231 bits (565), Expect = 1e-60
Identities = 107/108 (99%), Positives = 107/108 (99%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPKANREKMTQIMFETFNTPAMYVA QAVLSLYASGRTTGIVLD
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 155
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD++VAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+HTVPIYEGY L H+ + M I +RGY F REIV +
Sbjct: 156 SGDGVTHTVPIYEGYALP--HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 814 KE 819
KE
Sbjct: 214 KE 215
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 231 bits (565), Expect = 1e-60
Identities = 107/108 (99%), Positives = 107/108 (99%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPKANREKMTQIMFETFNTPAMYVA QAVLSLYASGRTTGIVLD
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 155
Score = 54.8 bits (126), Expect = 2e-07
Identities = 23/32 (71%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD++VAAL++DNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDD-APRAV 31
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+HTVPIYEGY L H+ + M I +RGY F REIV +
Sbjct: 156 SGDGVTHTVPIYEGYALP--HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 814 KE 819
KE
Sbjct: 214 KE 215
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 231 bits (564), Expect = 1e-60
Identities = 106/108 (98%), Positives = 107/108 (99%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPKANREKMTQIMFETFNTPAMYVA QAVLSLYASGRTTG+VLD
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD+EVAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+HTVPIYEGY L H+ + M I +RGY F REIV +
Sbjct: 156 SGDGVTHTVPIYEGYALP--HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 814 KE 819
KE
Sbjct: 214 KE 215
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 231 bits (564), Expect = 1e-60
Identities = 106/108 (98%), Positives = 107/108 (99%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPKANREKMTQIMFETFNTPAMYVA QAVLSLYASGRTTG+VLD
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD+EVAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+HTVPIYEGY L H+ + M I +RGY F REIV +
Sbjct: 156 SGDGVTHTVPIYEGYALP--HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 814 KE 819
KE
Sbjct: 214 KE 215
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 231 bits (564), Expect = 1e-60
Identities = 106/108 (98%), Positives = 107/108 (99%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPKANREKMTQIMFETFNTPAMYVA QAVLSLYASGRTTG+VLD
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD+EVAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+HTVPIYEGY L H+ + M I +RGY F REIV +
Sbjct: 156 SGDGVTHTVPIYEGYALP--HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 814 KE 819
KE
Sbjct: 214 KE 215
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 231 bits (564), Expect = 1e-60
Identities = 106/108 (98%), Positives = 107/108 (99%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPKANREKMTQIMFETFNTPAMYVA QAVLSLYASGRTTG+VLD
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD+EVAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+HTVPIYEGY L H+ + M I +RGY F REIV +
Sbjct: 156 SGDGVTHTVPIYEGYALP--HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 814 KE 819
KE
Sbjct: 214 KE 215
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 231 bits (564), Expect = 1e-60
Identities = 106/108 (98%), Positives = 107/108 (99%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPKANREKMTQIMFETFNTPAMYVA QAVLSLYASGRTTG+VLD
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD+EVAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+HTVPIYEGY L H+ + M I +RGY F REIV +
Sbjct: 156 SGDGVTHTVPIYEGYALP--HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 814 KE 819
KE
Sbjct: 214 KE 215
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 231 bits (564), Expect = 1e-60
Identities = 106/108 (98%), Positives = 107/108 (99%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 4 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 63
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPKANREKMTQIMFETFNTPAMYVA QAVLSLYASGRTTG+VLD
Sbjct: 64 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 111
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+HTVPIYEGY L H+ + M I +RGY F REIV +
Sbjct: 112 SGDGVTHTVPIYEGYALP--HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 169
Query: 814 KE 819
KE
Sbjct: 170 KE 171
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 231 bits (564), Expect = 1e-60
Identities = 106/108 (98%), Positives = 107/108 (99%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 34 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 93
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPKANREKMTQIMFETFNTPAMYVA QAVLSLYASGRTTG+VLD
Sbjct: 94 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 141
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+HTVPIYEGY L H+ + M I +RGY F REIV +
Sbjct: 142 SGDGVTHTVPIYEGYALP--HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 199
Query: 814 KE 819
KE
Sbjct: 200 KE 201
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 13 APRAVFPSIVGRPRHQGVMVGMGQK 37
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 231 bits (564), Expect = 1e-60
Identities = 106/108 (98%), Positives = 107/108 (99%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPKANREKMTQIMFETFNTPAMYVA QAVLSLYASGRTTG+VLD
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD+EVAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 52.8 bits (121), Expect = 6e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+HTVPIYEGY L H+ + M I +RGY F REIV +
Sbjct: 156 SGDGVTHTVPIYEGYALP--HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 814 KE 819
KE
Sbjct: 214 KE 215
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 227 bits (555), Expect = 2e-59
Identities = 104/108 (96%), Positives = 106/108 (98%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLT
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLT 106
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
EAPLNPK+NREKMTQIMFETFNTPAMYV QAVLSLYASGRTTGIVLD
Sbjct: 107 EAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLD 154
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 172 DEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
+EE+AALVVDNGSGMCKAGFAGD +PR +
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDD-APRAV 30
Score = 50.8 bits (116), Expect = 2e-06
Identities = 27/62 (43%), Positives = 32/62 (51%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
+GDGV+HTVPIYEGY L H+ M I +RGY F REIV +
Sbjct: 155 TGDGVTHTVPIYEGYALP--HAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDI 212
Query: 814 KE 819
KE
Sbjct: 213 KE 214
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 26 APRAVFPSIVGRPRHQGVMVGMGQK 50
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 153 bits (372), Expect = 2e-37
Identities = 65/105 (61%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
Frame = +3
Query: 321 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 497
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 498 LNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIVLD 632
LNP NRE+ +I FETFN PA+Y+ QAVLSLYA+GRTTG+VLD
Sbjct: 114 LNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLD 158
Score = 37.5 bits (83), Expect = 0.025
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+H VPI +G+ + +H+ + + GY F EIV E
Sbjct: 159 SGDGVTHAVPIVKGFAM--KHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREM 216
Query: 814 KEN 822
KEN
Sbjct: 217 KEN 219
Score = 32.3 bits (70), Expect = 0.92
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 190 LVVDNGSGMCKAGFAGDXRSPRRIS 264
+V+DNGSG+ KAGFAG+ + R +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFA 35
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 124 bits (300), Expect = 1e-28
Identities = 63/131 (48%), Positives = 85/131 (64%), Gaps = 3/131 (2%)
Frame = +3
Query: 249 PAPYFPRSWGDLVTRASWSC--MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 422
PA FP G + R++ + KD VG+E R +L + YP+++GIV NWDDM
Sbjct: 28 PAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAH 87
Query: 423 IWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLY 599
+W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA QAVL+LY
Sbjct: 88 VWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLY 147
Query: 600 ASGRTTGIVLD 632
A G TG+V+D
Sbjct: 148 AQGLLTGVVVD 158
Score = 35.9 bits (79), Expect = 0.075
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +1
Query: 634 SGDGVSHTVPIYEGYXLTGRHSXVXTXXGPEPXXLPWMXIXXKRGYXFXXXXXREIVXEX 813
SGDGV+H P+YEG+ L H + + +RGY F E V +
Sbjct: 159 SGDGVTHICPVYEGFAL--HHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQM 216
Query: 814 KE 819
KE
Sbjct: 217 KE 218
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 107 bits (258), Expect = 2e-23
Identities = 51/96 (53%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 321 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 497
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 498 LNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYAS 605
LN NRE +IMFE+FN P +Y+A QAVL+L AS
Sbjct: 124 LNTPENREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 88.2 bits (209), Expect = 1e-17
Identities = 38/84 (45%), Positives = 57/84 (67%)
Frame = +3
Query: 381 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 560
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 561 AMYVAXQAVLSLYASGRTTGIVLD 632
A Y++ VLS +A GRT G+++D
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVD 177
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 87.8 bits (208), Expect = 2e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 425
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD++VAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 87.8 bits (208), Expect = 2e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 425
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD+EVAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 87.8 bits (208), Expect = 2e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 425
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD+EVAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 82.2 bits (194), Expect = 9e-16
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 416
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSGMCKAGFAGDXRSPRRI 261
MCD++VAALVVDNGSGMCKAGFAGD +PR +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDD-APRAV 31
Score = 46.4 bits (105), Expect = 5e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 245 APRAVFPSIVGRPRHQGVMVLHGSE 319
APRAVFPSIVGRPRHQGVMV G +
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQK 51
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.014
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +3
Query: 315 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVL 590
+ A + ++I+F+ F ++ + L
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTL 131
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.014
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +3
Query: 315 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 488
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 489 EAPLNPKANREKMTQIMFETFNTPAMYVAXQAVL 590
+ A + ++I+F+ F ++ + L
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTL 131
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 33.5 bits (73), Expect = 0.40
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 447 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAXQAVLSLYASGRTTGIV 626
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 627 LD 632
+D
Sbjct: 326 VD 327
>AF045643-5|AAC02592.1| 607|Caenorhabditis elegans Hypothetical
protein F58H7.1 protein.
Length = 607
Score = 32.7 bits (71), Expect = 0.70
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Frame = +2
Query: 209 PECAKPVSRETXAPRAVFPSIVGRPRHQ-----GVMVLHGSEGLLRR**GTEQEGYPHTQ 373
PE A ++ P V P++VG P GV HG G L G P++Q
Sbjct: 133 PEAAHNLAESLLGPPMVLPTLVGLPAFPPTIGVGVYPTHGPNG-LNALNGPNGLSGPNSQ 191
Query: 374 IPHRTRHRHQLGRYGEDLASH 436
+PH H + G+ G H
Sbjct: 192 VPHDQNHMN--GQIGSPFGFH 210
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +1
Query: 448 SCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPP--CT*LXRPCSHCTRPVVPP 618
+C PR + SC P +P P P C PS P C P + C P PP
Sbjct: 69 NCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 1311 PXPPPPXXSPXXPXXXXXXSXXINXXXGGGGGXS 1412
P PPPP P P GGGGG S
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSS 335
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 1311 PXPPPPXXSPXXPXXXXXXSXXINXXXGGGGGXS 1412
P PPPP P P GGGGG S
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSS 335
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 166 MCDEEVAALVVDNGSG--MCKAGFAGDXRSPRRISLDRGATSSPGRH 300
+CD + +G +CKAGF+G+ + + DR A SS RH
Sbjct: 840 VCDVNAECMPEPSGGSECVCKAGFSGNGVTCESLLDDRHAHSSHNRH 886
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical protein
C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/65 (24%), Positives = 18/65 (27%)
Frame = -3
Query: 1348 GXXGEXXGGGGXGXXXXFXXXGXGXFXXXXXXXXXXXRXGXXPPXKXXFXGGGXFFXXXG 1169
G G GGGG G + G G F G PP + G
Sbjct: 118 GGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPPPAPSFSHAPSGGYSSGG 177
Query: 1168 XXXGG 1154
GG
Sbjct: 178 SSGGG 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,202,668
Number of Sequences: 27780
Number of extensions: 539582
Number of successful extensions: 1646
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1617
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4348758262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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