Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_D06_e620_08.seq
(1502 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain prot... 49 5e-05
X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain pro... 49 5e-05
X72760-1|CAA51288.1| 616|Homo sapiens S-laminin protein. 49 5e-05
S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain prot... 49 5e-05
AK094050-1|BAC04272.1| 381|Homo sapiens protein ( Homo sapiens ... 42 0.006
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ... 31 8.3
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ... 31 8.3
AL834464-1|CAD39123.1| 236|Homo sapiens hypothetical protein pr... 31 8.3
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. 31 8.3
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. 31 8.3
>Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain protein.
Length = 1798
Score = 48.8 bits (111), Expect = 5e-05
Identities = 25/97 (25%), Positives = 47/97 (48%)
Frame = +1
Query: 121 RSRANELFNKAHDFKSSAERIXNESQDLTIELKEFLSNTSSTPADVRTLANDILNLSIRI 300
+ RA +KA+ + E+ E Q+L +K+FL+ + P + +A +L LSI
Sbjct: 1488 QQRAQAALDKANASRGQVEQANQELQELIQSVKDFLNQEGADPDSIEMVATRVLELSIPA 1547
Query: 301 EPKEITELSXRIXXSVSQXTNIENXITETXPDLERAK 411
++I L+ I V +++ + T D+ RA+
Sbjct: 1548 SAEQIQHLAGAIAERVRSLADVDAILARTVGDVRRAE 1584
>X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain protein.
Length = 1798
Score = 48.8 bits (111), Expect = 5e-05
Identities = 25/97 (25%), Positives = 47/97 (48%)
Frame = +1
Query: 121 RSRANELFNKAHDFKSSAERIXNESQDLTIELKEFLSNTSSTPADVRTLANDILNLSIRI 300
+ RA +KA+ + E+ E Q+L +K+FL+ + P + +A +L LSI
Sbjct: 1488 QQRAQAALDKANASRGQVEQANQELQELIQSVKDFLNQEGADPDSIEMVATRVLELSIPA 1547
Query: 301 EPKEITELSXRIXXSVSQXTNIENXITETXPDLERAK 411
++I L+ I V +++ + T D+ RA+
Sbjct: 1548 SAEQIQHLAGAIAERVRSLADVDAILARTVGDVRRAE 1584
>X72760-1|CAA51288.1| 616|Homo sapiens S-laminin protein.
Length = 616
Score = 48.8 bits (111), Expect = 5e-05
Identities = 25/97 (25%), Positives = 47/97 (48%)
Frame = +1
Query: 121 RSRANELFNKAHDFKSSAERIXNESQDLTIELKEFLSNTSSTPADVRTLANDILNLSIRI 300
+ RA +KA+ + E+ E Q+L +K+FL+ + P + +A +L LSI
Sbjct: 306 QQRAQAALDKANASRGQVEQANQELQELIQSVKDFLNQEGADPDSIEMVATRVLELSIPA 365
Query: 301 EPKEITELSXRIXXSVSQXTNIENXITETXPDLERAK 411
++I L+ I V +++ + T D+ RA+
Sbjct: 366 SAEQIQHLAGAIAERVRSLADVDAILARTVGDVRRAE 402
>S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain protein.
Length = 1798
Score = 48.8 bits (111), Expect = 5e-05
Identities = 25/97 (25%), Positives = 47/97 (48%)
Frame = +1
Query: 121 RSRANELFNKAHDFKSSAERIXNESQDLTIELKEFLSNTSSTPADVRTLANDILNLSIRI 300
+ RA +KA+ + E+ E Q+L +K+FL+ + P + +A +L LSI
Sbjct: 1488 QQRAQAALDKANASRGQVEQANQELQELIQSVKDFLNQEGADPDSIEMVATRVLELSIPA 1547
Query: 301 EPKEITELSXRIXXSVSQXTNIENXITETXPDLERAK 411
++I L+ I V +++ + T D+ RA+
Sbjct: 1548 SAEQIQHLAGAIAERVRSLADVDAILARTVGDVRRAE 1584
>AK094050-1|BAC04272.1| 381|Homo sapiens protein ( Homo sapiens
cDNA FLJ36731 fis, clone UTERU2012703, highly similar to
LAMININ BETA-2 CHAIN PRECURSOR. ).
Length = 381
Score = 41.9 bits (94), Expect = 0.006
Identities = 21/88 (23%), Positives = 42/88 (47%)
Frame = +1
Query: 121 RSRANELFNKAHDFKSSAERIXNESQDLTIELKEFLSNTSSTPADVRTLANDILNLSIRI 300
+ RA +KA+ + E+ E Q+L +K+FL+ + P + +A +L LSI
Sbjct: 255 QQRAQAALDKANASRGQVEQANQELQELIQSVKDFLNQEGADPDSIEMVATRVLELSIPA 314
Query: 301 EPKEITELSXRIXXSVSQXTNIENXITE 384
++I L+ I V +++ + +
Sbjct: 315 SAEQIQHLAGAIAERVRSLADVDAILAQ 342
>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 31.5 bits (68), Expect = 8.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 313 ITELSXRIXXSVSQXTNIENXITETXPDLERAKSA 417
ITEL RI S Q +N ITE D+ER K A
Sbjct: 1300 ITELQRRIQESAKQIEAKDNKITELLNDVERLKQA 1334
>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 31.5 bits (68), Expect = 8.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 313 ITELSXRIXXSVSQXTNIENXITETXPDLERAKSA 417
ITEL RI S Q +N ITE D+ER K A
Sbjct: 1300 ITELQRRIQESAKQIEAKDNKITELLNDVERLKQA 1334
>AL834464-1|CAD39123.1| 236|Homo sapiens hypothetical protein
protein.
Length = 236
Score = 31.5 bits (68), Expect = 8.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 313 ITELSXRIXXSVSQXTNIENXITETXPDLERAKSA 417
ITEL RI S Q +N ITE D+ER K A
Sbjct: 120 ITELQRRIQESAKQIEAKDNKITELLNDVERLKQA 154
>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
Length = 1416
Score = 31.5 bits (68), Expect = 8.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 313 ITELSXRIXXSVSQXTNIENXITETXPDLERAKSA 417
ITEL RI S Q +N ITE D+ER K A
Sbjct: 1300 ITELQRRIQESAKQIEAKDNKITELLNDVERLKQA 1334
>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
Length = 1416
Score = 31.5 bits (68), Expect = 8.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 313 ITELSXRIXXSVSQXTNIENXITETXPDLERAKSA 417
ITEL RI S Q +N ITE D+ER K A
Sbjct: 1300 ITELQRRIQESAKQIEAKDNKITELLNDVERLKQA 1334
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,744,468
Number of Sequences: 237096
Number of extensions: 606089
Number of successful extensions: 1192
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22307317538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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