Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_D05_e612_07.seq
         (1579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    27   0.38 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   6.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   8.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   8.2  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 27.1 bits (57), Expect = 0.38
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -1

Query: 244 ICGPKFSSSVTKVRVTSLCVIILPVIFKXCLCI--ILFSFNRXKFY 113
           IC PK +S+  +V    +C  I  +I   CLCI  I   +N+ + Y
Sbjct: 25  ICVPKITSTNNEVPRWYICYTIGVIITIGCLCIWSIFNKWNQFRSY 70


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 374 LNYSLVFVLLKVILCVQHFKKYNFNAQFKALIKHQFFFFN 493
           +NY+LVF +LK  +  Q  K +  + +    +   F   N
Sbjct: 351 INYTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVN 390


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 138 NKIIQRHXLKITGNIITQRLVTLTFVTEEL 227
           N +     + ITG  I Q L  L F+T  L
Sbjct: 236 NDVFGTCLILITGKSIVQLLTCLNFITNNL 265


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 138 NKIIQRHXLKITGNIITQRLVTLTFVTEEL 227
           N +     + ITG  I Q L  L F+T  L
Sbjct: 236 NDVFGTCLILITGKSIVQLLTCLNFITNNL 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,622
Number of Sequences: 336
Number of extensions: 3607
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47627625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)