Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_D03_e596_07.seq
(1559 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6YBU8 Cluster: Reverse transcriptase/integrase; n=1; L... 103 1e-20
UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera... 93 2e-17
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 88 5e-16
UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-direct... 49 4e-04
UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|R... 49 4e-04
UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles g... 48 5e-04
UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1... 47 0.001
UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetic... 45 0.006
UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetic... 45 0.006
UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetic... 45 0.006
UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles g... 42 0.033
UniRef50_UPI00015B4A79 Cluster: PREDICTED: similar to Lian-Aa1 r... 40 0.13
UniRef50_UPI00015B47DE Cluster: PREDICTED: similar to has homolo... 40 0.13
UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles g... 39 0.31
UniRef50_Q03276 Cluster: Retrovirus-related Pol polyprotein from... 39 0.31
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 39 0.41
UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles g... 38 0.54
UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetic... 38 0.72
UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 38 0.72
UniRef50_Q03270 Cluster: Retrovirus-related Pol polyprotein from... 36 2.2
UniRef50_UPI00015B542A Cluster: PREDICTED: similar to myosin-rho... 36 2.9
UniRef50_Q9NBI5 Cluster: Reverse transcriptase; n=7; Drosophila|... 36 2.9
UniRef50_Q4DMG8 Cluster: Putative uncharacterized protein; n=2; ... 36 3.8
UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles g... 35 5.0
UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from... 35 5.0
UniRef50_Q868R8 Cluster: Reverse transcriptase; n=1; Anopheles g... 34 8.8
UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces ca... 34 8.8
>UniRef50_Q6YBU8 Cluster: Reverse transcriptase/integrase; n=1;
Lymantria dispar|Rep: Reverse transcriptase/integrase -
Lymantria dispar (Gypsy moth)
Length = 136
Score = 103 bits (247), Expect = 1e-20
Identities = 46/70 (65%), Positives = 50/70 (71%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG+ LVQVL+GHGCFG YLHKI RRE P CHHC EDTA HTL ECAAWE RR
Sbjct: 8 HGVFSFRLVQVLTGHGCFGKYLHKIVRRESTPFCHHCSCDEDTAQHTLEECAAWEGERRE 67
Query: 529 VVAAXGPDLS 558
+VA G DL+
Sbjct: 68 LVAIIGADLA 77
>UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera|Rep:
Reverse transcriptase - Papilio xuthus
Length = 1053
Score = 93.1 bits (221), Expect = 2e-17
Identities = 46/71 (64%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHC-DAAEDTAHHTLAECAAWEEPRR 525
HG L QVLSGHGCFG YL +I REP CHHC D EDTA HTLAEC AW E RR
Sbjct: 922 HGAVTFRLAQVLSGHGCFGSYLRRIG-REPSAVCHHCDDCPEDTAQHTLAECPAWTEQRR 980
Query: 526 AVVAAXGPDLS 558
+VAA G DLS
Sbjct: 981 DLVAAVGDDLS 991
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep:
Reverse transcriptase - Bombyx mori (Silk moth)
Length = 1076
Score = 88.2 bits (209), Expect = 5e-16
Identities = 41/63 (65%), Positives = 44/63 (69%)
Frame = +1
Query: 370 LVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRAVVAAXGP 549
LVQVL+GHGCFG YL +I EP RCHHC DTA HTLA C AWE RR +VA GP
Sbjct: 952 LVQVLTGHGCFGKYLRRIGA-EPTTRCHHCGHDLDTAEHTLAVCPAWEVQRRVLVAKIGP 1010
Query: 550 DLS 558
DLS
Sbjct: 1011 DLS 1013
>UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 932
Score = 48.8 bits (111), Expect = 4e-04
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +1
Query: 367 WLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPR 522
+L Q L+GHGCFG YLH+I + RC C D HTL C ++ R
Sbjct: 828 YLTQALTGHGCFGTYLHRIGKTAD-ERCWFCGEDRDDPEHTLFLCERFDGER 878
>UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|Rep:
Reverse transcriptase - Anopheles gambiae (African
malaria mosquito)
Length = 1049
Score = 48.8 bits (111), Expect = 4e-04
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPR 522
HG ++ QVLSGHGCF YLH+ R RC C ++T H + C + E R
Sbjct: 939 HGDVDYFVTQVLSGHGCFRSYLHRF-NRASSSRCPACKDEDETVDHVMFHCPRFAEER 995
>UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 973
Score = 48.4 bits (110), Expect = 5e-04
Identities = 23/70 (32%), Positives = 32/70 (45%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG ++ Q LS HGCF YLHK R P C C + ++ H L C + E R
Sbjct: 876 HGEVNFYMTQFLSDHGCFRSYLHKY-RHASSPDCPACVSIVESTEHVLFHCPRFAEERHE 934
Query: 529 VVAAXGPDLS 558
+ G ++
Sbjct: 935 ITVKCGTTIN 944
>UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1;
Drosophila melanogaster|Rep: Endonuclease/reverse
transcriptase - Drosophila melanogaster (Fruit fly)
Length = 989
Score = 47.2 bits (107), Expect = 0.001
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +1
Query: 370 LVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRAVVAAXGP 549
+ Q L+ HGCF YL + R +C +C A +TA H L C+ + E R +VA G
Sbjct: 888 MTQFLTDHGCFRGYLCRF-RHVDTAQCLYCTDAVETAEHILLHCSRFAEERAQLVALAGS 946
Query: 550 DLS 558
LS
Sbjct: 947 PLS 949
>UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=6; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1057
Score = 44.8 bits (101), Expect = 0.006
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +1
Query: 367 WLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAW 510
+L Q LSGHG F YL K+ R E RC +C DTA H L +C W
Sbjct: 767 YLTQFLSGHGDFRCYLRKMHRAEN-DRCVYCGEM-DTAEHVLFQCGKW 812
>UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=2; Tribolium castaneum|Rep: PREDICTED: similar
to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1208
Score = 44.8 bits (101), Expect = 0.006
Identities = 24/53 (45%), Positives = 28/53 (52%)
Frame = +1
Query: 352 GLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAW 510
G +L Q LSGHG F YL K+ R E RC +C DTA H L +C W
Sbjct: 882 GQVNFYLTQFLSGHGDFRCYLKKMHRAEN-DRCVYCGEM-DTAEHVLFQCGKW 932
>UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=1; Tribolium castaneum|Rep: PREDICTED: similar
to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 973
Score = 44.8 bits (101), Expect = 0.006
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG L Q L+GHGCFG YL +I + C +C EDT HTL C+ ++ R
Sbjct: 864 HGEIDYHLTQALTGHGCFGTYLCRIGKILN-ASCWYC-GEEDTPSHTLFSCSYFDPLRMD 921
Query: 529 VV 534
V+
Sbjct: 922 VM 923
>UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1173
Score = 42.3 bits (95), Expect = 0.033
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG L QVLSGHG F L ++ P P C C +TA H + EC + E R+
Sbjct: 933 HGEVNFHLSQVLSGHGFFRDDLCRMGFT-PSPDCIRCTGVPETAEHAMFECPRFAEIRQK 991
Query: 529 VVAAXGPD 552
++ D
Sbjct: 992 LLGEANTD 999
>UniRef50_UPI00015B4A79 Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 493
Score = 40.3 bits (90), Expect = 0.13
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 376 QVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRAVV 534
Q++ GHG G++ H I P C C+ +E+++ H L C A E R V+
Sbjct: 415 QLIIGHGTLGYHQHIIGPVNS-PTCRWCNQSEESSAHVLCHCTALAEKRHRVL 466
>UniRef50_UPI00015B47DE Cluster: PREDICTED: similar to has homology
with reverse transcriptase; 5 end of coding region for
ORF2 undetermined; putative; n=3; Nasonia
vitripennis|Rep: PREDICTED: similar to has homology with
reverse transcriptase; 5 end of coding region for ORF2
undetermined; putative - Nasonia vitripennis
Length = 883
Score = 40.3 bits (90), Expect = 0.13
Identities = 24/70 (34%), Positives = 29/70 (41%)
Frame = +1
Query: 367 WLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRAVVAAXG 546
+L Q SGHG F YL + R P +C D HT + W E RRA+ G
Sbjct: 285 YLTQFFSGHGYFRSYLFAM-NRVATPGYKYCGDERDDVRHTFFDWPHWAEKRRALELTIG 343
Query: 547 PDLSEGVXRV 576
E V V
Sbjct: 344 TFTPETVVEV 353
>UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1022
Score = 39.1 bits (87), Expect = 0.31
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAW 510
HG + Q LSGHG F +LH++ P P C C TA HT+ C +
Sbjct: 887 HGNIEFHMSQFLSGHGFFRSHLHRMG-YVPSPVCPACGDENQTAEHTIFICGMY 939
>UniRef50_Q03276 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 (Retrovirus-related
Pol polyprotein from type I retrotransposable element
R1) [Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease]; n=1; Popillia japonica|Rep:
Retrovirus-related Pol polyprotein from type-1
retrotransposable element R1 (Retrovirus-related Pol
polyprotein from type I retrotransposable element R1)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Popillia japonica (Japanese beetle)
Length = 245
Score = 39.1 bits (87), Expect = 0.31
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 373 VQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAA--WEEPRRAVVAAXG 546
VQ+++GHG F Y + RE C C AE+TA H EC E RR A G
Sbjct: 150 VQLVTGHGYFKAYYRRFKLREGSGLCE-CGEAEETADHVWWECTVEERERARREFTEAVG 208
Query: 547 --PDLSEGVXRVH 579
D+ + + VH
Sbjct: 209 TRADVRQKLSEVH 221
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 38.7 bits (86), Expect = 0.41
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +1
Query: 370 LVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRAVVAAXGP 549
L Q+++GHG F YL + +E P C A ++T H L EC + + R +
Sbjct: 1589 LTQIMTGHGGFSEYLCRFKCKES-PSCICDPAVKETVPHVLVECPIFAQARHDIEQKL-- 1645
Query: 550 DLSEGVXRVHGNVVTVRXSLF 612
D+ G+ +H ++ + F
Sbjct: 1646 DVKIGLDTLHEIIIDTNRNQF 1666
>UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1248
Score = 38.3 bits (85), Expect = 0.54
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 370 LVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRR 525
L Q+LSGH F +LH + P P C C + ++ H L C + E RR
Sbjct: 922 LAQILSGHRFFREFLH-VCGFAPSPECPACTGSVESVAHVLFYCPRFAEVRR 972
>UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Hypothetical 115 kDa protein in
type I retrotransposable element R1DM (ORF 2), partial -
Tribolium castaneum
Length = 2033
Score = 37.9 bits (84), Expect = 0.72
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPR 522
HG +L Q L+GHG F YL I +R P C +C D+A H L C W++ R
Sbjct: 1515 HGTLNYYLTQFLTGHGNFRSYLSGI-QRCPDDECIYC-GKRDSAEHIL-YCPRWKDFR 1569
>UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1201
Score = 37.9 bits (84), Expect = 0.72
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG L QVLSGHG F +L + P C C ++A H + EC ++ R
Sbjct: 984 HGDVTFHLSQVLSGHGFFREHLCGMQLTSS-PDCTRCPGVAESAEHAMFECPRFDSTRTE 1042
Query: 529 VVAAXGPD 552
++ P+
Sbjct: 1043 LLHGVVPE 1050
>UniRef50_Q03270 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 2
(Retrovirus-related Pol polyprotein from type I
retrotransposable element R1 2) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease]; n=1; Nasonia
vitripennis|Rep: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 2
(Retrovirus-related Pol polyprotein from type I
retrotransposable element R1 2) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease] - Nasonia
vitripennis (Parasitic wasp)
Length = 410
Score = 36.3 bits (80), Expect = 2.2
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 367 WLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPR 522
W+V +L+GHG +LHK E C D +ED H L C+ +E R
Sbjct: 305 WVVNILTGHGTLNAFLHKRGLSES-ASCMCGDVSEDW-EHVLCRCSMYESFR 354
>UniRef50_UPI00015B542A Cluster: PREDICTED: similar to myosin-rhogap
protein, myr; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to myosin-rhogap protein, myr - Nasonia
vitripennis
Length = 2292
Score = 35.9 bits (79), Expect = 2.9
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 370 LVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRAVVAAXGP 549
L Q+++GH ++ KI + E + C C+ AE+T H L C + + R + P
Sbjct: 2210 LTQIVTGHKRLRYHSLKIGK-EAMGICRRCEGAEETPTHVLTVCPKFAQLRHQCLGELFP 2268
Query: 550 DLSE 561
E
Sbjct: 2269 TYEE 2272
>UniRef50_Q9NBI5 Cluster: Reverse transcriptase; n=7;
Drosophila|Rep: Reverse transcriptase - Drosophila
palustris
Length = 359
Score = 35.9 bits (79), Expect = 2.9
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 379 VLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPR 522
+L+GHG +LHK + C C A E+T H L EC +E+ R
Sbjct: 264 LLTGHGSLNAFLHKRCLSDS-QECF-CGAGEETWEHVLCECVLYEDLR 309
>UniRef50_Q4DMG8 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 1001
Score = 35.5 bits (78), Expect = 3.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 488 VWCAVSSAASQWWHLGNGSLLAILCRYHPKQP 393
V A S A SQWW LG G+ L++L R+ P P
Sbjct: 217 VHVASSLAISQWWELGLGNALSVLVRWLPVAP 248
>UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1009
Score = 35.1 bits (77), Expect = 5.0
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 367 WLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEE 516
+L Q LS HG + + LH++ + P C C+ ED A HT+ C E
Sbjct: 888 FLSQFLSSHGFYAYQLHRM-QLTGSPLCDACEEPED-AEHTIFHCVRHRE 935
>UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 (Retrovirus-related
Pol polyprotein from type I retrotransposable element R1)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease]; n=1; Bradysia coprophila|Rep:
Retrovirus-related Pol polyprotein from type-1
retrotransposable element R1 (Retrovirus-related Pol
polyprotein from type I retrotransposable element R1)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Sciara coprophila (Fungus gnat)
Length = 1004
Score = 35.1 bits (77), Expect = 5.0
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +1
Query: 352 GLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPR 522
GLC L VL+GHG +LHK P C C A + H L EC +E+ R
Sbjct: 902 GLC---LGYVLTGHGSMNGFLHKRGLSN-TPVC-MCGAPNEDVKHLLGECPLYEDLR 953
>UniRef50_Q868R8 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 988
Score = 34.3 bits (75), Expect = 8.8
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAEC 501
HG +L Q+L+GHG Y + E P C C A + H L C
Sbjct: 905 HGEVDFFLTQLLTGHGFLRSYFVEKGILEGSPNCPECGDAVEDVEHVLFHC 955
>UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1390
Score = 34.3 bits (75), Expect = 8.8
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 370 LVQVLSGHGCFGWYLHKIARRE-PLPRCHHCDAAEDTAHHTLAECAAWEEPRRAVV 534
++Q+ SG +L++ E P PRC C +T H L C WE+ R+ ++
Sbjct: 1292 IIQLRSGKTGLAAFLNRCKVPEFPTPRCP-CGYEWETVEHVLIHCERWEQQRQGLI 1346
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,939,182
Number of Sequences: 1657284
Number of extensions: 13519231
Number of successful extensions: 36159
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 33639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36069
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 167360982125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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