Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_D03_e596_07.seq
         (1559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   4.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   8.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   8.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   8.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   8.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 302  VCXASLDIFYMLRNCNEEAHTFSYEIFFFY 213
            +C A  D+FY+   C         +I+FFY
Sbjct: 1004 ICAA--DVFYICHVCYATIQEVRAKIYFFY 1031


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 302 VCXASLDIFYMLRNCNEEAHTFSYEIFFFY 213
           +C A  D+FY+   C         +I+FFY
Sbjct: 285 ICAA--DVFYICHVCYATIQEVRAKIYFFY 312


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 367 WLVQVLSGHGCFGWYLHKIARREPLP 444
           W++ +       GW+ + I+R  P+P
Sbjct: 254 WIIPIAIFLVSLGWWENYISRHSPIP 279


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 367 WLVQVLSGHGCFGWYLHKIARREPLP 444
           W++ +       GW+ + I+R  P+P
Sbjct: 254 WIIPIAIFLVSLGWWENYISRHSPIP 279


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 367 WLVQVLSGHGCFGWYLHKIARREPLP 444
           W++ +       GW+ + I+R  P+P
Sbjct: 254 WIIPIAIFLVSLGWWENYISRHSPIP 279


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 367 WLVQVLSGHGCFGWYLHKIARREPLP 444
           W++ +       GW+ + I+R  P+P
Sbjct: 254 WIIPIAIFLVSLGWWENYISRHSPIP 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,974
Number of Sequences: 336
Number of extensions: 3723
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47013075
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)