Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_D03_e596_07.seq
(1559 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 49 4e-07
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 48 7e-07
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 45 7e-06
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 43 3e-05
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 43 3e-05
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 42 4e-05
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 42 5e-05
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 41 1e-04
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 39 3e-04
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 39 3e-04
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 38 6e-04
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 38 8e-04
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 38 0.001
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 35 0.006
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 34 0.010
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 48.8 bits (111), Expect = 4e-07
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPR 522
HG ++ QVLSGHGCF YLH+ R RC C ++T H + C + E R
Sbjct: 939 HGDVDYFVTQVLSGHGCFRSYLHRF-NRASSSRCPACKDEDETVDHVMFHCPRFAEER 995
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 48.0 bits (109), Expect = 7e-07
Identities = 23/70 (32%), Positives = 32/70 (45%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG ++ Q LS HGCF YLHK R P C C + ++ H L C + E R
Sbjct: 876 HGEVNFYMTQFLSDHGCFRSYLHKY-RHASSPDCPACVSIVESTEHVLFHCPRFAEERHE 934
Query: 529 VVAAXGPDLS 558
+ G ++
Sbjct: 935 ITVKCGTTIN 944
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 44.8 bits (101), Expect = 7e-06
Identities = 25/68 (36%), Positives = 29/68 (42%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG L QVLSGHG F YL E P C C + AHH + EC + R
Sbjct: 976 HGEMTFHLAQVLSGHGFFREYLAINGFTES-PDCRSCAGVPENAHHAIFECPRFARVRME 1034
Query: 529 VVAAXGPD 552
GP+
Sbjct: 1035 YFGELGPN 1042
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 42.7 bits (96), Expect = 3e-05
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG L QVLSGHG F L ++ P P C C +TA H + EC + E R+
Sbjct: 933 HGEVNFHLSQVLSGHGFFRDDLCRMGFT-PSPDCIRCTGVPETAEHAMFECPRFAEIRQK 991
Query: 529 VVAAXGPD 552
++ D
Sbjct: 992 LLGEANTD 999
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 42.7 bits (96), Expect = 3e-05
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG L QVLSGHG F YL + P C C +TA H + EC + E R+
Sbjct: 909 HGDVSFHLCQVLSGHGFFRDYLCRNGFTSS-PDCQRCSGVPETAEHAMFECPRFAEVRQQ 967
Query: 529 VV 534
++
Sbjct: 968 LL 969
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 42.3 bits (95), Expect = 4e-05
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG L Q++SGHG F YL + + P C +C ++A H + C + E R
Sbjct: 928 HGEVNFHLSQIISGHGFFRKYLADM-KFTSSPDCPNCPGVRESAEHAMFACLRFAEVRER 986
Query: 529 VVAAXGPD 552
++ PD
Sbjct: 987 LMDGVNPD 994
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 41.9 bits (94), Expect = 5e-05
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +1
Query: 346 HHGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRR 525
+HG L QVLSGHG YL+K+ R P C C + H + EC + E R
Sbjct: 923 NHGEVTFHLSQVLSGHGFLREYLNKM-RFTSSPACPRCPGVVEGVEHVMFECPRFAEVRS 981
Query: 526 AVVAAXGPDLSE 561
++ P+ E
Sbjct: 982 ELLDGVLPETLE 993
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 40.7 bits (91), Expect = 1e-04
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPR 522
HG L QVL+GHG F YLH + P C C + ++ H L +C + E R
Sbjct: 918 HGEVDFHLSQVLTGHGYFREYLH-VCGFAPSAECPRCPGSVESVAHVLFQCEVFHEIR 974
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 39.1 bits (87), Expect = 3e-04
Identities = 24/68 (35%), Positives = 29/68 (42%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG L QVLSGHG F YL P C C +TA EC + R+
Sbjct: 972 HGDMTFHLAQVLSGHGFFRDYLCHNGFTSS-PDCQLCVGVPETADDAFFECPRFAAVRQE 1030
Query: 529 VVAAXGPD 552
++ GPD
Sbjct: 1031 LLGEGGPD 1038
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 39.1 bits (87), Expect = 3e-04
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAW 510
HG + Q LSGHG F +LH++ P P C C TA HT+ C +
Sbjct: 887 HGNIEFHMSQFLSGHGFFRSHLHRMG-YVPSPVCPACGDENQTAEHTIFICGMY 939
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 38.3 bits (85), Expect = 6e-04
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 370 LVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRR 525
L Q+LSGH F +LH + P P C C + ++ H L C + E RR
Sbjct: 922 LAQILSGHRFFREFLH-VCGFAPSPECPACTGSVESVAHVLFYCPRFAEVRR 972
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 37.9 bits (84), Expect = 8e-04
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG L QVLSGHG F +L + P C C ++A H + EC ++ R
Sbjct: 984 HGDVTFHLSQVLSGHGFFREHLCGMQLTSS-PDCTRCPGVAESAEHAMFECPRFDSTRTE 1042
Query: 529 VVAAXGPD 552
++ P+
Sbjct: 1043 LLHGVVPE 1050
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 37.5 bits (83), Expect = 0.001
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEEPRRA 528
HG +L QVLSGH +LH + P P C C + ++ H + EC + + R
Sbjct: 920 HGEVDFYLSQVLSGHAFVHEFLH-VFGFAPSPDCPRCAGSVESVAHVMFECPRFADVRAE 978
Query: 529 VVAAXG 546
+ G
Sbjct: 979 FLQGVG 984
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 35.1 bits (77), Expect = 0.006
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 367 WLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAECAAWEE 516
+L Q LS HG + + LH++ + P C C+ ED A HT+ C E
Sbjct: 888 FLSQFLSSHGFYAYQLHRM-QLTGSPLCDACEEPED-AEHTIFHCVRHRE 935
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 34.3 bits (75), Expect = 0.010
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 349 HGLCRCWLVQVLSGHGCFGWYLHKIARREPLPRCHHCDAAEDTAHHTLAEC 501
HG +L Q+L+GHG Y + E P C C A + H L C
Sbjct: 905 HGEVDFFLTQLLTGHGFLRSYFVEKGILEGSPNCPECGDAVEDVEHVLFHC 955
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 847,276
Number of Sequences: 2352
Number of extensions: 14556
Number of successful extensions: 50
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 183690540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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