Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_C07_e627_05.seq
(1563 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 354 1e-97
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 353 3e-97
SB_56| Best HMM Match : Actin (HMM E-Value=0) 353 3e-97
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 353 3e-97
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 348 8e-96
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 347 1e-95
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 240 2e-63
SB_54| Best HMM Match : Actin (HMM E-Value=0) 142 7e-34
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 8e-33
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 130 4e-30
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 109 1e-24
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 79 7e-15
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 69 8e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 1e-11
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 9e-07
SB_45708| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 1.1
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 32 1.4
SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_39090| Best HMM Match : zf-piccolo (HMM E-Value=0.81) 31 2.5
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 31 3.3
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 31 3.3
SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25) 30 4.4
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 30 4.4
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 5.8
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.8
SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10) 29 7.7
SB_26130| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.7
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.7
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 354 bits (870), Expect = 1e-97
Identities = 168/176 (95%), Positives = 172/176 (97%)
Frame = +2
Query: 299 RXLTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 478
+ LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITI
Sbjct: 154 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITI 213
Query: 479 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 658
GNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA
Sbjct: 214 GNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 273
Query: 659 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 826
DRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 274 DRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 329
Score = 134 bits (325), Expect = 1e-31
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +1
Query: 103 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 282
TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDL
Sbjct: 89 TFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDL 148
Query: 283 TDYLMK 300
TDYLMK
Sbjct: 149 TDYLMK 154
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 353 bits (867), Expect = 3e-97
Identities = 167/176 (94%), Positives = 172/176 (97%)
Frame = +2
Query: 299 RXLTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 478
+ LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITI 251
Query: 479 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 658
GNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIA
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIA 311
Query: 659 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 826
DRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 312 DRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Score = 134 bits (325), Expect = 1e-31
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +1
Query: 103 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 282
TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDL
Sbjct: 127 TFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDL 186
Query: 283 TDYLMK 300
TDYLMK
Sbjct: 187 TDYLMK 192
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 353 bits (867), Expect = 3e-97
Identities = 167/176 (94%), Positives = 172/176 (97%)
Frame = +2
Query: 299 RXLTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 478
+ LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITI
Sbjct: 191 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITI 250
Query: 479 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 658
GNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIA
Sbjct: 251 GNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIA 310
Query: 659 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 826
DRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 311 DRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Score = 135 bits (327), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +1
Query: 103 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 282
TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDL
Sbjct: 126 TFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 185
Query: 283 TDYLMK 300
TDYLMK
Sbjct: 186 TDYLMK 191
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 353 bits (867), Expect = 3e-97
Identities = 167/176 (94%), Positives = 172/176 (97%)
Frame = +2
Query: 299 RXLTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 478
+ LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITI 251
Query: 479 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 658
GNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIA
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIA 311
Query: 659 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 826
DRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 312 DRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Score = 135 bits (327), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +1
Query: 103 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 282
TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDL
Sbjct: 127 TFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 186
Query: 283 TDYLMK 300
TDYLMK
Sbjct: 187 TDYLMK 192
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 348 bits (855), Expect = 8e-96
Identities = 165/176 (93%), Positives = 172/176 (97%)
Frame = +2
Query: 299 RXLTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 478
+ LTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAA+SSSLEKSYELPDGQVITI
Sbjct: 191 KILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITI 250
Query: 479 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 658
GNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIA
Sbjct: 251 GNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA 310
Query: 659 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 826
DRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 311 DRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Score = 135 bits (327), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +1
Query: 103 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 282
TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDL
Sbjct: 126 TFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 185
Query: 283 TDYLMK 300
TDYLMK
Sbjct: 186 TDYLMK 191
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 347 bits (854), Expect = 1e-95
Identities = 164/172 (95%), Positives = 169/172 (98%)
Frame = +2
Query: 311 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNER 490
ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYELPDGQVITIGNER
Sbjct: 169 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNER 228
Query: 491 FRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 670
FRCPEAL QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQ
Sbjct: 229 FRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQ 288
Query: 671 KEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 826
KEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 289 KEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 340
Score = 87.4 bits (207), Expect = 3e-17
Identities = 42/47 (89%), Positives = 45/47 (95%), Gaps = 2/47 (4%)
Frame = +1
Query: 103 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 237
TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 127 TFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 240 bits (588), Expect = 2e-63
Identities = 110/136 (80%), Positives = 124/136 (91%)
Frame = +2
Query: 419 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 598
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 599 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 778
KDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 779 TFQQMWISKQEYDESG 826
TFQQMWI+K+EY E G
Sbjct: 125 TFQQMWIAKEEYHEYG 140
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 142 bits (344), Expect = 7e-34
Identities = 64/111 (57%), Positives = 83/111 (74%)
Frame = +2
Query: 299 RXLTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 478
R +TERGYSF +TAE++I+RD+KE LCY A+D+E+E+ A +S E Y LPDGQ I I
Sbjct: 2236 RLVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRI 2295
Query: 479 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 631
G+ERFR E LFQPS LG + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2296 GSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
Score = 110 bits (264), Expect = 3e-24
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = +1
Query: 103 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 282
+FN P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDL
Sbjct: 2171 SFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDL 2230
Query: 283 TDYLMK 300
T YL +
Sbjct: 2231 THYLQR 2236
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 138 bits (335), Expect = 8e-33
Identities = 79/200 (39%), Positives = 113/200 (56%), Gaps = 29/200 (14%)
Frame = +2
Query: 314 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF 493
RGY+F TA+ E VR +KEKLCYV + EQE A ++ L + Y LPDG+V+ + ERF
Sbjct: 200 RGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERF 259
Query: 494 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 673
PEALFQP + +E G+ E +N+I D+D R + Y + VLSGG+TMYPG+ R+++
Sbjct: 260 EAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLER 319
Query: 674 EITAL---------------------APST-----MKIKI-IAPP-ERKYSVWIGGSILA 769
EI L P T K KI I P RK+ V++GG++LA
Sbjct: 320 EIKQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLA 379
Query: 770 S-LSTFQQMWISKQEYDESG 826
+ W++++EY+E G
Sbjct: 380 DIMKDKDSFWMTRKEYEEKG 399
Score = 94.7 bits (225), Expect = 2e-19
Identities = 40/60 (66%), Positives = 51/60 (85%)
Frame = +1
Query: 121 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 300
+Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K
Sbjct: 136 VYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIK 195
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 130 bits (313), Expect = 4e-30
Identities = 60/65 (92%), Positives = 63/65 (96%)
Frame = +1
Query: 106 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 285
FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLT
Sbjct: 6 FNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLT 65
Query: 286 DYLMK 300
DYLMK
Sbjct: 66 DYLMK 70
Score = 70.9 bits (166), Expect = 3e-12
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +2
Query: 299 RXLTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 409
+ +TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 70 KLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 109 bits (263), Expect(2) = 1e-24
Identities = 45/64 (70%), Positives = 61/64 (95%)
Frame = +1
Query: 103 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 282
TFN PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD+
Sbjct: 152 TFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDV 211
Query: 283 TDYL 294
+ YL
Sbjct: 212 SRYL 215
Score = 38.3 bits (85), Expect = 0.017
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 569 SIMKCDVDIRKDLYANTVLSGGTTMYPG 652
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
Score = 23.0 bits (47), Expect(2) = 1e-24
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 406 DGHRCLQQLPREVLRTPRRSSHHNRKRKVPLPRGSL 513
+GH E++RT + S + +++ LP GS+
Sbjct: 222 EGHCFHSSSELEIVRTIKEESMESERQQYALPDGSI 257
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 79.4 bits (187), Expect = 7e-15
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Frame = +2
Query: 470 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 646
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 647 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLS 778
R+Q++I + P ++ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 779 TFQQMWISKQEYDESGXLDCAQEVLL 856
F + +K +YDE G C L
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPFL 341
Score = 53.2 bits (122), Expect = 5e-07
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 103 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 279
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 280 LTDYLMK 300
+T ++ +
Sbjct: 98 ITFFVQQ 104
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 69.3 bits (162), Expect = 8e-12
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +2
Query: 311 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNER 490
+RG++FT+++ +IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E
Sbjct: 826 QRGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYEC 885
Query: 491 FRCPEALFQPSFL 529
E LF+P L
Sbjct: 886 ISSMEPLFRPDLL 898
Score = 50.0 bits (114), Expect = 5e-06
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +1
Query: 136 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 294
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENL 819
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.9 bits (161), Expect = 1e-11
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +2
Query: 530 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 709
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 710 KII---APPERKYSVWIGGSILASL 775
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
Score = 58.4 bits (135), Expect = 1e-08
Identities = 25/60 (41%), Positives = 41/60 (68%)
Frame = +1
Query: 106 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 285
+N PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 60 YNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFIT 119
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 9e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = +2
Query: 566 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 721
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 722 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 820
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_45708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1510
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 66 AGNSARGXIMFEXLQHTRHVRSYPGRALTVRVRSYHRYRAGF--RRWCI 206
A S RG +++ + V SY RALT R+Y YR F +W +
Sbjct: 839 ASGSGRGAALYQKKHNKLRVISYGSRALTPAERNYSAYRREFLALKWAV 887
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 1.1
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 172 TGIVLDSGDGVSHTVPI 222
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 500 PEALFQPSFLGMEACGIHET 559
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 468 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 563
S++SETK SV +R + + + W+W+ TRR+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWRYFTHHETRRY 129
>SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 31.9 bits (69), Expect = 1.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 659 RQYQGTWWYHQTILCWRTSLY 597
R YQG WWY+Q +C LY
Sbjct: 262 RAYQGAWWYNQCHMCNPNGLY 282
>SB_39090| Best HMM Match : zf-piccolo (HMM E-Value=0.81)
Length = 245
Score = 31.1 bits (67), Expect = 2.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 66 AGNSARGXIMFEXLQHTRHVRSYPGRALTVRVRSYHRYRAGF--RRWCIP 209
A S G +++ + V +Y RALT R+Y YR F +W +P
Sbjct: 188 ASGSGLGAALYQKKHNKLRVIAYGSRALTPAERNYSAYRREFLALKWAVP 237
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 30.7 bits (66), Expect = 3.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 468 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 563
S++SETK SV +R + + + W+W+ TRR+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWRYFTHHETRRY 490
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 30.7 bits (66), Expect = 3.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 468 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 563
S++SETK SV +R + + + W+W+ TRR+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWRYFTHHETRRY 126
>SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25)
Length = 291
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 468 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 563
S+QSE K SV +R + + ++W+W+ TRR+
Sbjct: 226 STQSELKASVVERFNRTLKTWMWRWFTHKETRRY 259
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 468 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 563
S+QSE K SV +R + + ++W+W+ TRR+
Sbjct: 59 STQSELKASVVERFNRTLKTWMWRWFTHKETRRY 92
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 5.8
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 762 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 589
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 588 TS 583
S
Sbjct: 815 AS 816
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 29.9 bits (64), Expect = 5.8
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 468 SSQSETKGSVAQRLSSSPRSWVWK 539
S++SETK SV +R + + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
>SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1164
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 468 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 563
S+++ETK SV +R + + + W+W+ TRR+
Sbjct: 100 STKNETKASVVERFNRTFKGWMWRYFTHHETRRY 133
>SB_26130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 29.5 bits (63), Expect = 7.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 748 PYRILPLWWRDDFDLHRGWSEGCDFLLHTVGNTRV 644
PYR L WW D+HR W ++ GN R+
Sbjct: 24 PYRSLSDWWDHKTDMHR-WRTVQHYVTRCCGNVRL 57
>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 468 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 563
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 193 STRSELKSSVVERFNRTLKTWIWRWFTHRETRRY 226
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,137,959
Number of Sequences: 59808
Number of extensions: 749744
Number of successful extensions: 2953
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2946
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5105932995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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