Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_C06_e619_06.seq
         (1521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03342-1|CAA27048.1|  135|Homo sapiens protein ( Human mRNA for ...   191   5e-48
BC070209-1|AAH70209.1|  135|Homo sapiens ribosomal protein L32 p...   191   5e-48
BC011514-1|AAH11514.1|  135|Homo sapiens ribosomal protein L32 p...   191   5e-48
AB061831-1|BAB79469.1|  135|Homo sapiens ribosomal protein L32 p...   191   5e-48
BC015974-1|AAH15974.1|  107|Homo sapiens RPS29 protein protein.       102   3e-21
BC053996-1|AAH53996.1|   33|Homo sapiens RPL32P3 protein protein.      33   3.6  
U35113-1|AAA78935.1|  715|Homo sapiens mta1 protein.                   32   4.8  
BC142941-1|AAI42942.1|  715|Homo sapiens metastasis associated 1...    32   4.8  
BC009443-1|AAH09443.2|  263|Homo sapiens MTA1 protein protein.         32   4.8  

>X03342-1|CAA27048.1|  135|Homo sapiens protein ( Human mRNA for
           ribosomal protein L32. ).
          Length = 135

 Score =  191 bits (466), Expect = 5e-48
 Identities = 90/121 (74%), Positives = 100/121 (82%)
 Frame = +3

Query: 90  KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
           K+  ++FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGSNKKT+HMLPSG
Sbjct: 14  KKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSG 73

Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
           FRK LVHNV+ELE+L+M N+ YCAEI H  S  KNRKA  ERA  L IR TN  ARLRS 
Sbjct: 74  FRKFLVHNVKELEVLLMCNKSYCAEIAHNVS-SKNRKAIVERAAQLAIRVTNPNARLRSE 132

Query: 450 D 452
           +
Sbjct: 133 E 133


>BC070209-1|AAH70209.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  191 bits (466), Expect = 5e-48
 Identities = 90/121 (74%), Positives = 100/121 (82%)
 Frame = +3

Query: 90  KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
           K+  ++FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGSNKKT+HMLPSG
Sbjct: 14  KKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSG 73

Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
           FRK LVHNV+ELE+L+M N+ YCAEI H  S  KNRKA  ERA  L IR TN  ARLRS 
Sbjct: 74  FRKFLVHNVKELEVLLMCNKSYCAEIAHNVS-SKNRKAIVERAAQLAIRVTNPNARLRSE 132

Query: 450 D 452
           +
Sbjct: 133 E 133


>BC011514-1|AAH11514.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  191 bits (466), Expect = 5e-48
 Identities = 90/121 (74%), Positives = 100/121 (82%)
 Frame = +3

Query: 90  KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
           K+  ++FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGSNKKT+HMLPSG
Sbjct: 14  KKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSG 73

Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
           FRK LVHNV+ELE+L+M N+ YCAEI H  S  KNRKA  ERA  L IR TN  ARLRS 
Sbjct: 74  FRKFLVHNVKELEVLLMCNKSYCAEIAHNVS-SKNRKAIVERAAQLAIRVTNPNARLRSE 132

Query: 450 D 452
           +
Sbjct: 133 E 133


>AB061831-1|BAB79469.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  191 bits (466), Expect = 5e-48
 Identities = 90/121 (74%), Positives = 100/121 (82%)
 Frame = +3

Query: 90  KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
           K+  ++FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGSNKKT+HMLPSG
Sbjct: 14  KKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSG 73

Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
           FRK LVHNV+ELE+L+M N+ YCAEI H  S  KNRKA  ERA  L IR TN  ARLRS 
Sbjct: 74  FRKFLVHNVKELEVLLMCNKSYCAEIAHNVS-SKNRKAIVERAAQLAIRVTNPNARLRSE 132

Query: 450 D 452
           +
Sbjct: 133 E 133


>BC015974-1|AAH15974.1|  107|Homo sapiens RPS29 protein protein.
          Length = 107

 Score =  102 bits (245), Expect = 3e-21
 Identities = 49/80 (61%), Positives = 58/80 (72%)
 Frame = +3

Query: 213 MPNIGYGSNKKTRHMLPSGFRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXE 392
           MPNIGYG NKKT+H+LPSGF K LVHNV+ELE+L++ N+ YC EI H  S  KN KA  E
Sbjct: 27  MPNIGYGRNKKTKHILPSGFWKFLVHNVKELEVLLVSNKSYCVEITHDVS-SKNCKAILE 85

Query: 393 RAXXLXIRXTNAAARLRSXD 452
           RA  + IR TNA A L S +
Sbjct: 86  RAAQVVIRVTNANASLHSAE 105


>BC053996-1|AAH53996.1|   33|Homo sapiens RPL32P3 protein protein.
          Length = 33

 Score = 32.7 bits (71), Expect = 3.6
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 90  KRGDERFIRHQSDRYDKLKR 149
           K+  ++FIRHQSDRY K+KR
Sbjct: 14  KKRTKKFIRHQSDRYVKIKR 33


>U35113-1|AAA78935.1|  715|Homo sapiens mta1 protein.
          Length = 715

 Score = 32.3 bits (70), Expect = 4.8
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +3

Query: 144 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 266
           KR++ +  G+D  +++R     LMP+ G  ++ +TRHM PS
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618


>BC142941-1|AAI42942.1|  715|Homo sapiens metastasis associated 1
           protein.
          Length = 715

 Score = 32.3 bits (70), Expect = 4.8
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +3

Query: 144 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 266
           KR++ +  G+D  +++R     LMP+ G  ++ +TRHM PS
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618


>BC009443-1|AAH09443.2|  263|Homo sapiens MTA1 protein protein.
          Length = 263

 Score = 32.3 bits (70), Expect = 4.8
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +3

Query: 144 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 266
           KR++ +  G+D  +++R     LMP+ G  ++ +TRHM PS
Sbjct: 130 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 166


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,482,266
Number of Sequences: 237096
Number of extensions: 1005245
Number of successful extensions: 1827
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1822
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22636172342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)