Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_C06_e619_06.seq
(1521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal prot... 183 7e-46
U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal prot... 183 7e-46
BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p pro... 183 7e-46
AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p pro... 183 7e-46
AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB... 183 7e-46
AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA... 183 7e-46
AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC... 183 7e-46
X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal prot... 145 1e-34
BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p pro... 56 1e-07
>Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 183 bits (445), Expect = 7e-46
Identities = 85/121 (70%), Positives = 95/121 (78%)
Frame = +3
Query: 90 KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
K+ + FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+G
Sbjct: 13 KKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTG 72
Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
F+K LVHNVRELE+L+MQNR YC EI HG S K RK ERA L +R TN RLRS
Sbjct: 73 FKKFLVHNVRELEVLLMQNRVYCGEIAHGVS-SKKRKEIVERAKQLSVRLTNPNGRLRSQ 131
Query: 450 D 452
+
Sbjct: 132 E 132
>U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 183 bits (445), Expect = 7e-46
Identities = 85/121 (70%), Positives = 95/121 (78%)
Frame = +3
Query: 90 KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
K+ + FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+G
Sbjct: 13 KKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTG 72
Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
F+K LVHNVRELE+L+MQNR YC EI HG S K RK ERA L +R TN RLRS
Sbjct: 73 FKKFLVHNVRELEVLLMQNRVYCGEIAHGVS-SKKRKEIVERAKQLSVRLTNPNGRLRSQ 131
Query: 450 D 452
+
Sbjct: 132 E 132
>BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p
protein.
Length = 147
Score = 183 bits (445), Expect = 7e-46
Identities = 85/121 (70%), Positives = 95/121 (78%)
Frame = +3
Query: 90 KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
K+ + FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+G
Sbjct: 26 KKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTG 85
Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
F+K LVHNVRELE+L+MQNR YC EI HG S K RK ERA L +R TN RLRS
Sbjct: 86 FKKFLVHNVRELEVLLMQNRVYCGEIAHGVS-SKKRKEIVERAKQLSVRLTNPNGRLRSQ 144
Query: 450 D 452
+
Sbjct: 145 E 145
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 47 FKMAIRPVYXPTIVKKRRR 103
FKM IRP Y P IVKKR +
Sbjct: 12 FKMTIRPAYRPKIVKKRTK 30
>AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p
protein.
Length = 134
Score = 183 bits (445), Expect = 7e-46
Identities = 85/121 (70%), Positives = 95/121 (78%)
Frame = +3
Query: 90 KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
K+ + FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+G
Sbjct: 13 KKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTG 72
Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
F+K LVHNVRELE+L+MQNR YC EI HG S K RK ERA L +R TN RLRS
Sbjct: 73 FKKFLVHNVRELEVLLMQNRVYCGEIAHGVS-SKKRKEIVERAKQLSVRLTNPNGRLRSQ 131
Query: 450 D 452
+
Sbjct: 132 E 132
>AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB,
isoform B protein.
Length = 134
Score = 183 bits (445), Expect = 7e-46
Identities = 85/121 (70%), Positives = 95/121 (78%)
Frame = +3
Query: 90 KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
K+ + FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+G
Sbjct: 13 KKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTG 72
Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
F+K LVHNVRELE+L+MQNR YC EI HG S K RK ERA L +R TN RLRS
Sbjct: 73 FKKFLVHNVRELEVLLMQNRVYCGEIAHGVS-SKKRKEIVERAKQLSVRLTNPNGRLRSQ 131
Query: 450 D 452
+
Sbjct: 132 E 132
>AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA,
isoform A protein.
Length = 134
Score = 183 bits (445), Expect = 7e-46
Identities = 85/121 (70%), Positives = 95/121 (78%)
Frame = +3
Query: 90 KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
K+ + FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+G
Sbjct: 13 KKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTG 72
Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
F+K LVHNVRELE+L+MQNR YC EI HG S K RK ERA L +R TN RLRS
Sbjct: 73 FKKFLVHNVRELEVLLMQNRVYCGEIAHGVS-SKKRKEIVERAKQLSVRLTNPNGRLRSQ 131
Query: 450 D 452
+
Sbjct: 132 E 132
>AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC,
isoform C protein.
Length = 147
Score = 183 bits (445), Expect = 7e-46
Identities = 85/121 (70%), Positives = 95/121 (78%)
Frame = +3
Query: 90 KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
K+ + FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+G
Sbjct: 26 KKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTG 85
Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIRXTNAAARLRSX 449
F+K LVHNVRELE+L+MQNR YC EI HG S K RK ERA L +R TN RLRS
Sbjct: 86 FKKFLVHNVRELEVLLMQNRVYCGEIAHGVS-SKKRKEIVERAKQLSVRLTNPNGRLRSQ 144
Query: 450 D 452
+
Sbjct: 145 E 145
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 47 FKMAIRPVYXPTIVKKRRR 103
FKM IRP Y P IVKKR +
Sbjct: 12 FKMTIRPAYRPKIVKKRTK 30
>X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal protein
49 protein.
Length = 133
Score = 145 bits (352), Expect = 1e-34
Identities = 70/109 (64%), Positives = 80/109 (73%)
Frame = +3
Query: 90 KRGDERFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSG 269
K+ + FIRHQSDRY KL WRKP+GIDNRV RRFKGQYLMPNIGYGSNK+TRHMLP+G
Sbjct: 13 KKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYGSNKRTRHMLPTG 72
Query: 270 FRKVLVHNVRELEILMMQNRXYCAEIXHGSSXXKNRKAXXERAXXLXIR 416
F+K LVHNVRELE+L+MQN E+ S K ERA L +R
Sbjct: 73 FKKFLVHNVRELEVLLMQNPRLLREMPTAS--PPRSKEIIERAKQLSLR 119
>BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p
protein.
Length = 126
Score = 56.4 bits (130), Expect = 1e-07
Identities = 38/98 (38%), Positives = 47/98 (47%)
Frame = +2
Query: 152 LA*TERYRQQST*ALQGSILDAQHWLWFK*EDPSHATQRFS*SLGPQRSRTGDPDDAEQX 331
+A + YRQQS LQG++ DAQH L + P HA R G QR+R G P AE
Sbjct: 1 MAQAQGYRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEVPGAQRARAGGPAHAEPR 60
Query: 332 ILRGNRTWXFXSKKQEGYXRAXPXAQXQXDQRGRSSXF 445
+LR +R + Q G RA A Q RS F
Sbjct: 61 LLRRDRPRRLLQEAQ-GDCRARQAAVGPPHQPQRSPAF 97
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,368,615
Number of Sequences: 53049
Number of extensions: 303142
Number of successful extensions: 627
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8493783408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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