Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_C05_e611_05.seq
(1542 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 36 0.087
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.11
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 35 0.20
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 34 0.35
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 33 0.61
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 33 0.61
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 33 0.61
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.61
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 32 1.4
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) 30 4.3
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 30 4.3
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 30 5.7
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8) 29 7.5
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 35.9 bits (79), Expect = 0.087
Identities = 29/101 (28%), Positives = 33/101 (32%), Gaps = 2/101 (1%)
Frame = +1
Query: 943 PXMGGXXGKXPPILXXFPXPPFFPAXPXXXXKPPXKGXPXXGGGAPPXXXLLXGXPPPXL 1122
P MGG P P P +P P G P GG PP G PPP +
Sbjct: 17 PYMGGYPPAAPG--GYPPAPGGYPPAPGGYPPSGGYGYPPAGGYPPPQPGYAGGPPPPGI 74
Query: 1123 KXLF*YPXPXPXXXXXPPXPXFXGXSXXNXAXGF--XPPPP 1239
P P PP G + G+ PPPP
Sbjct: 75 APGIGGPPPS-GQYGAPPTSQPYGAPPTSGYPGYQQHPPPP 114
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 35.5 bits (78), Expect = 0.11
Identities = 22/71 (30%), Positives = 27/71 (38%)
Frame = +1
Query: 943 PXMGGXXGKXPPILXXFPXPPFFPAXPXXXXKPPXKGXPXXGGGAPPXXXLLXGXPPPXL 1122
P GG G PP + +P P FP P P +G P G PP + PP +
Sbjct: 460 PPPGGMRGMPPPPMGMYPPPRGFPPPPFGPPPPFYRGPPPPRGMPPPPRQRMPSQGPPQV 519
Query: 1123 KXLF*YPXPXP 1155
YP P
Sbjct: 520 H----YPSQDP 526
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 34.7 bits (76), Expect = 0.20
Identities = 32/107 (29%), Positives = 34/107 (31%), Gaps = 2/107 (1%)
Frame = +1
Query: 919 PPKKXXXXPXMGGXXGKXPPILXXFPXPPFFPAXPXXXXKPPXK-GXPXXGGGAPPXXXL 1095
PP P GG G P +P P P PP P GG APP
Sbjct: 156 PPPPGTQPPGQGGYPGYNQPPPGHYPAP----GQPGGYYPPPGGYQQPPPGGYAPPPYVP 211
Query: 1096 LXGXP-PPXLKXLF*YPXPXPXXXXXPPXPXFXGXSXXNXAXGFXPP 1233
G PP L YP P P PP + G G PP
Sbjct: 212 QEGGGIPPQNHPLTNYPAPPPQGYAPPPG-GYPGAPPAGGYPGAPPP 257
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 33.9 bits (74), Expect = 0.35
Identities = 29/110 (26%), Positives = 33/110 (30%), Gaps = 3/110 (2%)
Frame = +1
Query: 919 PPKKXXXXPXMGGXXGKXPPILXXFPXPPFFPAXPXXXXKPPXKGX---PXXGGGAPPXX 1089
PP + P PP P PP PP + P GAPP
Sbjct: 290 PPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPP 349
Query: 1090 XLLXGXPPPXLKXLF*YPXPXPXXXXXPPXPXFXGXSXXNXAXGFXPPPP 1239
+ PPP P P P PP P G + PPPP
Sbjct: 350 SM-GMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPP 398
Score = 31.5 bits (68), Expect = 1.9
Identities = 27/92 (29%), Positives = 30/92 (32%)
Frame = +1
Query: 919 PPKKXXXXPXMGGXXGKXPPILXXFPXPPFFPAXPXXXXKPPXKGXPXXGGGAPPXXXLL 1098
PP + P PP + P PP A P PP GG PP +
Sbjct: 330 PPSRSSQRPPPPSRGAPPPPSMGMAP-PPVGGAAPPPPPPPPV-------GGPPPPPPPI 381
Query: 1099 XGXPPPXLKXLF*YPXPXPXXXXXPPXPXFXG 1194
G PP L P P P PP P G
Sbjct: 382 EGRPPSSLGNP--PPPPPPGRGAPPPGPMIPG 411
Score = 30.3 bits (65), Expect = 4.3
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +1
Query: 994 PXPPFFPAXPXXXXKPPXKGX---PXXGGGAPPXXXLLXGXPPPXLKXLF*YPXPXPXXX 1164
P PP A P PP +G P G APP G PP P P
Sbjct: 288 PPPPSRGAAP----PPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSR 343
Query: 1165 XXPPXPXFXGXSXXNXAXGFXPPPP 1239
PP P G + PPPP
Sbjct: 344 GAPPPPSM-GMAPPPVGGAAPPPPP 367
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 33.1 bits (72), Expect = 0.61
Identities = 26/96 (27%), Positives = 28/96 (29%)
Frame = -2
Query: 1259 PXXTXXXGGGGXKPXAXFXXEXPXKXGXGGXXXXXGXGXGY*KRXFKXGGGXPXKRXQXG 1080
P GGGG G GG G G G + G G G
Sbjct: 762 PVVAVVVGGGGGGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGG 821
Query: 1079 GAPPPSXGXPXXGGFXXXXGXAGKNGGXGNXXRMGG 972
G G GGF G A +GG G GG
Sbjct: 822 GGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGG 857
Score = 30.3 bits (65), Expect = 4.3
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = -2
Query: 1181 GXGGXXXXXGXGXGY*KRXFKXGGGXPXKRXQX-GGAPPPSXGXPXXGGFXXXXGXAGKN 1005
G GG G G GY GGG GG G GG+ G G
Sbjct: 793 GGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGG 852
Query: 1004 GGXGNXXRMGG 972
GG G GG
Sbjct: 853 GGGGGGGGGGG 863
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 33.1 bits (72), Expect = 0.61
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 1040 PXXRGXXXXGGGPPPXXXFWXXPPPPF*KXFSNTPXRXPXFXXXPQXLXXGGPPXXTGHX 1219
P RG PPP P PP + P R P P PP G
Sbjct: 219 PPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSS 278
Query: 1220 VSPPPP 1237
PPPP
Sbjct: 279 NPPPPP 284
Score = 31.5 bits (68), Expect = 1.9
Identities = 21/66 (31%), Positives = 23/66 (34%)
Frame = +2
Query: 1040 PXXRGXXXXGGGPPPXXXFWXXPPPPF*KXFSNTPXRXPXFXXXPQXLXXGGPPXXTGHX 1219
P RG G PPP PPPP K S+ P P GPP
Sbjct: 252 PPMRGPTSGGEPPPPKNA----PPPP--KRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRD 305
Query: 1220 VSPPPP 1237
+P PP
Sbjct: 306 QAPAPP 311
Score = 29.9 bits (64), Expect = 5.7
Identities = 22/79 (27%), Positives = 23/79 (29%)
Frame = +1
Query: 919 PPKKXXXXPXMGGXXGKXPPILXXFPXPPFFPAXPXXXXKPPXKGXPXXGGGAPPXXXLL 1098
PP P GG K P P PP P KP G PP
Sbjct: 142 PPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSR 201
Query: 1099 XGXPPPXLKXLF*YPXPXP 1155
G PP + P P P
Sbjct: 202 HGSAPPPPERSSGPPPPPP 220
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 33.1 bits (72), Expect = 0.61
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 1040 PXXRGXXXXGGGPPPXXXFWXXPPPPF*KXFSNTPXRXPXFXXXPQXLXXGGPPXXTGHX 1219
P RG PPP P PP + P R P P PP G
Sbjct: 131 PPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSS 190
Query: 1220 VSPPPP 1237
PPPP
Sbjct: 191 NPPPPP 196
Score = 31.5 bits (68), Expect = 1.9
Identities = 21/66 (31%), Positives = 23/66 (34%)
Frame = +2
Query: 1040 PXXRGXXXXGGGPPPXXXFWXXPPPPF*KXFSNTPXRXPXFXXXPQXLXXGGPPXXTGHX 1219
P RG G PPP PPPP K S+ P P GPP
Sbjct: 164 PPMRGPTSGGEPPPPKNA----PPPP--KRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRD 217
Query: 1220 VSPPPP 1237
+P PP
Sbjct: 218 QAPAPP 223
Score = 29.9 bits (64), Expect = 5.7
Identities = 22/79 (27%), Positives = 23/79 (29%)
Frame = +1
Query: 919 PPKKXXXXPXMGGXXGKXPPILXXFPXPPFFPAXPXXXXKPPXKGXPXXGGGAPPXXXLL 1098
PP P GG K P P PP P KP G PP
Sbjct: 54 PPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSR 113
Query: 1099 XGXPPPXLKXLF*YPXPXP 1155
G PP + P P P
Sbjct: 114 HGSAPPPPERSSGPPPPPP 132
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 33.1 bits (72), Expect = 0.61
Identities = 30/100 (30%), Positives = 32/100 (32%), Gaps = 1/100 (1%)
Frame = +1
Query: 943 PXMGGXXGKXPPILXXFPXPPFFPAXPXXXXKPPXKGXPXXGGGAPPXXXLLXGXPPPXL 1122
P G G PP PP P +PP G GG PP G PPP
Sbjct: 495 PGAGQGGGPPPPGAGQGGGPPP-PGAGQGWGQPP-PGAGQGGGPPPPGAGQGGGPPPPGA 552
Query: 1123 KXLF*YPXPXPXXXXXPPXP-XFXGXSXXNXAXGFXPPPP 1239
+ P P PP P G A PPPP
Sbjct: 553 GQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPP 592
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = +2
Query: 1067 GGGPPP--XXXFWXXPPPPF*KXFSNTPXRXPXFXXXPQXLXXGGPPX-XTGHXVSPPPP 1237
GGGPPP W PPP + P P GPP G PPPP
Sbjct: 544 GGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPP 603
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 31.9 bits (69), Expect = 1.4
Identities = 26/93 (27%), Positives = 28/93 (30%), Gaps = 2/93 (2%)
Frame = +1
Query: 967 KXPPILXXFPXPPFFPAXPXXXXKPPXKG-XPXXGG-GAPPXXXLLXGXPPPXLKXLF*Y 1140
+ P P PP P P PP P GG PP G PPP
Sbjct: 115 RAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPP------- 167
Query: 1141 PXPXPXXXXXPPXPXFXGXSXXNXAXGFXPPPP 1239
P P P S + G PPPP
Sbjct: 168 PPIAPAATVPAPAVPLAAASPPPPSGGPPPPPP 200
Score = 30.7 bits (66), Expect = 3.3
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 1386 AXXPXPPPXVXXXPXXLXFXQXXPPXXLXFXXPPGXPXILXXXAXPLPPPP 1538
A P PPP P PP PP P I P PPPP
Sbjct: 107 APTPPPPPRAPETPSQAP-SPPPPPTSPATRAPPPPPPIAPATGGPPPPPP 156
Score = 29.1 bits (62), Expect = 9.9
Identities = 26/104 (25%), Positives = 27/104 (25%), Gaps = 5/104 (4%)
Frame = +2
Query: 1013 PRXPXXXXNPXXRGXXXXGGGPPP----XXXFWXXPPPPF*KXFSNTPXRX-PXFXXXPQ 1177
P P P GGPPP PPPP + P P P
Sbjct: 130 PTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPP 189
Query: 1178 XLXXGGPPXXTGHXVSPPPPXXXLFXXAPVXXXXXXPXXGXAXG 1309
G PP PPPP L P G G
Sbjct: 190 PPSGGPPPPPPPPPPPPPPPILELAAPPPPGSVLGAALTGIKSG 233
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.5 bits (68), Expect = 1.9
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = +3
Query: 1347 PPKXXPXXFXFFPAXXPXPPPXVXXXPXXLXFXQXXPPXXLXFXXPPGXPXILXXXAXPL 1526
PPK P P P PPP P + PP F P P A P
Sbjct: 754 PPKVTPKPPAP-PQFAPVPPPCAPIPP--MPCSAPLPPAPAPFSAAPHLPPAPNISAEPP 810
Query: 1527 PPPP 1538
PPPP
Sbjct: 811 PPPP 814
>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.1 bits (67), Expect = 2.5
Identities = 26/107 (24%), Positives = 28/107 (26%)
Frame = -2
Query: 1175 GGXXXXXGXGXGY*KRXFKXGGGXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGX 996
GG G G G GG GGA G GG G GG
Sbjct: 248 GGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGG 307
Query: 995 GNXXRMGGXXPXKPPMXGXXXXFXGGXKXKXXFXGXIXXGNXKSRGG 855
G GG G GG G + G + GG
Sbjct: 308 GATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATGG 354
>SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)
Length = 186
Score = 30.3 bits (65), Expect = 4.3
Identities = 27/107 (25%), Positives = 29/107 (27%)
Frame = -2
Query: 1175 GGXXXXXGXGXGY*KRXFKXGGGXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGX 996
GG G G G GGG GGA G GG G GG
Sbjct: 44 GGHGGATGGGGGATGGGATGGGGGAT--GGGGGATGGHGGATGGGGGATGDGGGATGGGG 101
Query: 995 GNXXRMGGXXPXKPPMXGXXXXFXGGXKXKXXFXGXIXXGNXKSRGG 855
G GG G GG G G+ + GG
Sbjct: 102 GATGGGGGATGGHGGATGGGVGATGGHGGATGGHGGATGGHGGATGG 148
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 30.3 bits (65), Expect = 4.3
Identities = 23/82 (28%), Positives = 27/82 (32%)
Frame = -2
Query: 1238 GGGGXKPXAXFXXEXPXKXGXGGXXXXXGXGXGY*KRXFKXGGGXPXKRXQXGGAPPPSX 1059
GGGG + + + G GG G GY GGG GG
Sbjct: 138 GGGGYRSGGGYRGGGGYRGGGGGYRGRGRGGGGY------GGGGYGGGGYGGGGHGGGGY 191
Query: 1058 GXPXXGGFXXXXGXAGKNGGXG 993
G GG G +G GG G
Sbjct: 192 GGGGYGGGGGGYGGSGYGGGGG 213
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = -3
Query: 1540 GGGGGRGXAXXXRXXGXPGGXXKXRXXGGXXXKKXRXXGXXXTXGG---GXGXFAGKXKX 1370
GGGG RG R G GG GG G GG G G + G
Sbjct: 150 GGGGYRGGGGGYRGRGRGGGGYGGGGYGGGGYGGGGHGGGGYGGGGYGGGGGGYGGSGYG 209
Query: 1369 XXGXFLGG 1346
G + GG
Sbjct: 210 GGGGYGGG 217
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.9 bits (64), Expect = 5.7
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 1386 AXXPXPPPXVXXXPXXLXFX--QXXPPXXLXFXXPPGXPXILXXXAXPLPPPPP 1541
A P PPP P Q PP F PP P P PPPPP
Sbjct: 278 ATPPPPPPPPSNTPGMFASSGFQPPPPPPTDFAPPPPPPE--PTSELPPPPPPP 329
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/69 (30%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = -2
Query: 1115 GGGXPXKRXQXGGAPPPS-XGXPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKPPMXGX 939
GGG +R Q GG S G GG+ G GG G R GG G
Sbjct: 738 GGGYNDRRMQQGGYGNRSGGGYRGGGGYGGGGGGYRGGGGYGGGHRGGGGYGGGGHRGGS 797
Query: 938 XXXFXGGXK 912
+ G K
Sbjct: 798 YSGYRGSYK 806
>SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)
Length = 291
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/65 (24%), Positives = 20/65 (30%)
Frame = -3
Query: 1537 GGGGRGXAXXXRXXGXPGGXXKXRXXGGXXXKKXRXXGXXXTXGGGXGXFAGKXKXXXGX 1358
GG G PG GG G GGG G +G+ G
Sbjct: 204 GGRAGGMNSGYNGGPAPGAVGGFGGGGGGSEDNGASGGGGGYSGGGSGTHSGQAGGGGGS 263
Query: 1357 FLGGA 1343
+ GG+
Sbjct: 264 YCGGS 268
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 1200 GGPPKXRXWGXXXXXGXRXGVLEKXF*XGGGGXXQKXXXGGG 1075
GGPP+ + WG G G + GGGG + GGG
Sbjct: 778 GGPPRDQNWGRDPREGW-GGNRDNYSRGGGGGYNRGYGSGGG 818
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,186,867
Number of Sequences: 59808
Number of extensions: 681557
Number of successful extensions: 1536
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5023768556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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