Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_C05_e611_05.seq
         (1542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   1.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.4  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   5.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 14/46 (30%), Positives = 15/46 (32%)
 Frame = +3

Query: 1404 PPXVXXXPXXLXFXQXXPPXXLXFXXPPGXPXILXXXAXPLPPPPP 1541
            PP     P  L      P        P G P +      P PPPPP
Sbjct: 544  PPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPP 589


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
            transcription factor FRU-MB protein.
          Length = 759

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 4/69 (5%)
 Frame = -3

Query: 1540 GGGGGRGXAXX----XRXXGXPGGXXKXRXXGGXXXKKXRXXGXXXTXGGGXGXFAGKXK 1373
            GGGGG G            G  GG  +    GG         G     GGG    AG   
Sbjct: 658  GGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGG---VAGMMS 714

Query: 1372 XXXGXFLGG 1346
               G   GG
Sbjct: 715  TGAGVNRGG 723


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 16/70 (22%), Positives = 20/70 (28%)
 Frame = -2

Query: 1064 SXGXPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKPPMXGXXXXFXGGXKXKXXFXGXI 885
            S G    GG       AG +GG G+   + G    + P                      
Sbjct: 1127 SNGNAGSGGGQANQAAAGSDGGAGSPAELSGNRERRSPSIPNSNAGAATPTATTAAPLAP 1186

Query: 884  XXGNXKSRGG 855
              GN K  GG
Sbjct: 1187 TTGNSKGGGG 1196


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 15/51 (29%), Positives = 18/51 (35%)
 Frame = +3

Query: 1383 PAXXPXPPPXVXXXPXXLXFXQXXPPXXLXFXXPPGXPXILXXXAXPLPPP 1535
            P     P P +   P  +      PP        PG P +L     PLPPP
Sbjct: 66   PFTAGPPKPNISIPPPTMNM----PPRPGMIPGMPGAPPLLMGPNGPLPPP 112


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,217,496
Number of Sequences: 2352
Number of extensions: 23475
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 181252170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)