Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_C05_e611_05.seq
(1542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.044
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.044
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.044
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.13
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.23
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.23
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.23
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 34 0.31
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 33 0.71
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 33 0.71
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 2.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 2.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 2.2
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 31 2.9
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 3.8
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 30 3.8
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 30 3.8
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 30 3.8
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 5.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 5.0
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 30 5.0
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 30 5.0
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 30 5.0
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 6.7
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 8.8
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 8.8
AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen prot... 29 8.8
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 29 8.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 8.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 8.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.7 bits (81), Expect = 0.044
Identities = 33/109 (30%), Positives = 34/109 (31%), Gaps = 2/109 (1%)
Frame = +1
Query: 919 PPKKXXXXPXMGGXXGKXPPILXXFPXPP--FFPAXPXXXXKPPXKGXPXXGGGAPPXXX 1092
PP P + G PP P PP P P PP P GG PP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP----PPAGGSPPPPR- 293
Query: 1093 LLXGXPPPXLKXLF*YPXPXPXXXXXPPXPXFXGXSXXNXAXGFXPPPP 1239
G PPP P P PP G S G PPPP
Sbjct: 294 --AGSPPPPPP-----PRGSPPTGSLPPPQ--AGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.7 bits (81), Expect = 0.044
Identities = 33/109 (30%), Positives = 34/109 (31%), Gaps = 2/109 (1%)
Frame = +1
Query: 919 PPKKXXXXPXMGGXXGKXPPILXXFPXPP--FFPAXPXXXXKPPXKGXPXXGGGAPPXXX 1092
PP P + G PP P PP P P PP P GG PP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP----PPAGGSPPPPR- 314
Query: 1093 LLXGXPPPXLKXLF*YPXPXPXXXXXPPXPXFXGXSXXNXAXGFXPPPP 1239
G PPP P P PP G S G PPPP
Sbjct: 315 --AGSPPPPPP-----PRGSPPTGSLPPPQ--AGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.044
Identities = 33/109 (30%), Positives = 34/109 (31%), Gaps = 2/109 (1%)
Frame = +1
Query: 919 PPKKXXXXPXMGGXXGKXPPILXXFPXPP--FFPAXPXXXXKPPXKGXPXXGGGAPPXXX 1092
PP P + G PP P PP P P PP P GG PP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP----PPAGGSPPPPR- 299
Query: 1093 LLXGXPPPXLKXLF*YPXPXPXXXXXPPXPXFXGXSXXNXAXGFXPPPP 1239
G PPP P P PP G S G PPPP
Sbjct: 300 --AGSPPPPPP-----PRGSPPTGSLPPPQ--AGGSPPPAGTGSPPPPP 339
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.13
Identities = 27/99 (27%), Positives = 29/99 (29%), Gaps = 3/99 (3%)
Frame = -2
Query: 1238 GGGGXKPXAXFXXEXPXKXGXGGXXXXXGXGXGY*KRXFKXGGGXPXKRXQXGGAPPPSX 1059
GGGG + G GG G G G GGG GG
Sbjct: 213 GGGGSSGGGGYAS---APSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGG 269
Query: 1058 G---XPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKPP 951
G GG G AG +GG G P PP
Sbjct: 270 GGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 32.7 bits (71), Expect = 0.71
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = -2
Query: 1112 GGXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKPP 951
GG AP P+ P GG+ G AG G N G P PP
Sbjct: 575 GGYSGSESSAPAAPEPA---PSSGGYSGGGGDAGSAAGGSNYSGGGETAPAAPP 625
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = -3
Query: 1540 GGGGGRGXAXXXRXXGXPGGXXKXRXXGGXXXKKXRXXGXXXTXGGGXGXFAGKXKXXXG 1361
G GG G A G GG GG G + GGG G +A G
Sbjct: 195 GSSGGGGYAVAPSGGGGCGGGGSS-GGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGG 253
Query: 1360 XFLGGA 1343
GG+
Sbjct: 254 YSSGGS 259
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.13
Identities = 27/99 (27%), Positives = 29/99 (29%), Gaps = 3/99 (3%)
Frame = -2
Query: 1238 GGGGXKPXAXFXXEXPXKXGXGGXXXXXGXGXGY*KRXFKXGGGXPXKRXQXGGAPPPSX 1059
GGGG + G GG G G G GGG GG
Sbjct: 213 GGGGSSGGGGYAS---APSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGG 269
Query: 1058 G---XPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKPP 951
G GG G AG +GG G P PP
Sbjct: 270 GGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 32.7 bits (71), Expect = 0.71
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = -2
Query: 1112 GGXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKPP 951
GG AP P+ P GG+ G AG G N G P PP
Sbjct: 575 GGYSGSESSAPAAPEPA---PSSGGYSGGGGDAGSAAGGSNYSGGGETAPAAPP 625
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = -3
Query: 1540 GGGGGRGXAXXXRXXGXPGGXXKXRXXGGXXXKKXRXXGXXXTXGGGXGXFAGKXKXXXG 1361
G GG G A G GG GG G + GGG G +A G
Sbjct: 195 GSSGGGGYAVAPSGGGGCGGGGSS-GGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGG 253
Query: 1360 XFLGGA 1343
GG+
Sbjct: 254 YSSGGS 259
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.23
Identities = 35/114 (30%), Positives = 36/114 (31%), Gaps = 7/114 (6%)
Frame = +1
Query: 919 PPKKXXXXPXMG-GXXGKXPPILXXFPXPPFFPAXPXXXXKPPXKGX--PXXGGGAPP-- 1083
P K P G PPI P PP P PP G P GG PP
Sbjct: 688 PTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Query: 1084 --XXXLLXGXPPPXLKXLF*YPXPXPXXXXXPPXPXFXGXSXXNXAXGFXPPPP 1239
+ G PPP P P P PP P G G PPPP
Sbjct: 748 PGGLPPISGGPPP--------PPPPPGGCPPPPPPPPPG----GFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.23
Identities = 35/114 (30%), Positives = 36/114 (31%), Gaps = 7/114 (6%)
Frame = +1
Query: 919 PPKKXXXXPXMG-GXXGKXPPILXXFPXPPFFPAXPXXXXKPPXKGX--PXXGGGAPP-- 1083
P K P G PPI P PP P PP G P GG PP
Sbjct: 688 PTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Query: 1084 --XXXLLXGXPPPXLKXLF*YPXPXPXXXXXPPXPXFXGXSXXNXAXGFXPPPP 1239
+ G PPP P P P PP P G G PPPP
Sbjct: 748 PGGLPPISGGPPP--------PPPPPGGCPPPPPPPPPG----GFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.23
Identities = 35/114 (30%), Positives = 36/114 (31%), Gaps = 7/114 (6%)
Frame = +1
Query: 919 PPKKXXXXPXMG-GXXGKXPPILXXFPXPPFFPAXPXXXXKPPXKGX--PXXGGGAPP-- 1083
P K P G PPI P PP P PP G P GG PP
Sbjct: 271 PTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330
Query: 1084 --XXXLLXGXPPPXLKXLF*YPXPXPXXXXXPPXPXFXGXSXXNXAXGFXPPPP 1239
+ G PPP P P P PP P G G PPPP
Sbjct: 331 PGGLPPISGGPPP--------PPPPPGGCPPPPPPPPPG----GFKGGPPPPPP 372
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical protein
K01A6.4 protein.
Length = 284
Score = 33.9 bits (74), Expect = 0.31
Identities = 24/90 (26%), Positives = 27/90 (30%), Gaps = 1/90 (1%)
Frame = -2
Query: 1238 GGGGXKPXAXFXXEXPXK-XGXGGXXXXXGXGXGY*KRXFKXGGGXPXKRXQXGGAPPPS 1062
GG G F + P + G GG G G + F G G
Sbjct: 155 GGFGGNSQNGFPAQRPSQQSGFGGQGMQSGFGMNSQQGDFGGQGQQSGFEGNTQGHSQGG 214
Query: 1061 XGXPXXGGFXXXXGXAGKNGGXGNXXRMGG 972
G GF G G GG G R GG
Sbjct: 215 FGGQSSSGFGGQQGGQGGQGGFGGSTRTGG 244
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 32.7 bits (71), Expect = 0.71
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = -3
Query: 1540 GGGGGRGXAXXXRXXGXPGGXXKXRXXGGXXXKKXRXXGXXXTXGGGXGXFAGKXKXXXG 1361
GGGGG G GG GG G GGG G F G G
Sbjct: 75 GGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGGF-GDILGGIG 133
Query: 1360 XFLGG 1346
+GG
Sbjct: 134 SLIGG 138
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 32.7 bits (71), Expect = 0.71
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = -3
Query: 1540 GGGGGRGXAXXXRXXGXPGGXXKXRXXGGXXXKKXRXXGXXXTXGGGXGXFAGKXKXXXG 1361
GGGGG G GG GG G GGG G F G G
Sbjct: 100 GGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGGF-GDILGGIG 158
Query: 1360 XFLGG 1346
+GG
Sbjct: 159 SLIGG 163
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 973 PPILXXFPXPPFFPAXPXXXXKPPXKGXPXXGGGAPP 1083
PP F P A P PP G P G GAPP
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPP 650
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 973 PPILXXFPXPPFFPAXPXXXXKPPXKGXPXXGGGAPP 1083
PP F P A P PP G P G GAPP
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPP 476
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/63 (33%), Positives = 23/63 (36%)
Frame = -2
Query: 1181 GXGGXXXXXGXGXGY*KRXFKXGGGXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNG 1002
G GG G GY GGG P AP P+ P GG+ G G G
Sbjct: 363 GGGGGGGGAAAGGGY--NAGGGGGGAPQAAPAPQAAPAPA--APAGGGY-NAGGGGGAGG 417
Query: 1001 GXG 993
G G
Sbjct: 418 GGG 420
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical protein
F41E7.5 protein.
Length = 112
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 1112 GGXPXKRXQXG-GAPPPSXGXPXXGGFXXXXGXAGKNGGXGNXXRMGG 972
GG P + + G G P S P GGF G G NGG G GG
Sbjct: 38 GGGPGQFGRGGFGGGPGSNYGPGRGGFGGNGGFGG-NGGFGGGPSYGG 84
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical protein
T06E4.4 protein.
Length = 290
Score = 30.3 bits (65), Expect = 3.8
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -2
Query: 1109 GXPXKRXQXGGAPPPS-XGXPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKP 954
G P + Q GGA P G P G G G G GN GG P
Sbjct: 214 GGPGQPGQSGGAGAPGPAGAPGAPGGPGNAGTPGTPGAPGNAGAPGGDAAYCP 266
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 3.8
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 1395 PXPPPXVXXXPXXLXFXQXXPPXXLXFXXPPGXPXILXXXAXPLPPPPP 1541
P PPP P + P PP P I P PPPPP
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 3.8
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 1395 PXPPPXVXXXPXXLXFXQXXPPXXLXFXXPPGXPXILXXXAXPLPPPPP 1541
P PPP P + P PP P I P PPPPP
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein 15,
isoform a protein.
Length = 780
Score = 30.3 bits (65), Expect = 3.8
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 1079 GAPPPSXGXPXXGGFXXXXGXAG-KNGGXGNXXRMGG 972
G PPP G P GG G G NG G+ MGG
Sbjct: 211 GQPPPQMGAPNMGGPPNGYGGYGMMNGPPGSGAPMGG 247
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein 15,
isoform b protein.
Length = 777
Score = 30.3 bits (65), Expect = 3.8
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 1079 GAPPPSXGXPXXGGFXXXXGXAG-KNGGXGNXXRMGG 972
G PPP G P GG G G NG G+ MGG
Sbjct: 208 GQPPPQMGAPNMGGPPNGYGGYGMMNGPPGSGAPMGG 244
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -3
Query: 1537 GGGGRGXAXXXRXXGXPGGXXKXRXXGGXXXKKXRXXGXXXTXGGGXGXFAGKXKXXXGX 1358
GGGG G GG GG G GGG G F G G
Sbjct: 122 GGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGGF-GDILGGIGS 180
Query: 1357 FLGG 1346
+GG
Sbjct: 181 LIGG 184
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = -2
Query: 1115 GGGXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGXGNX---XRMGGXXPXKPP 951
GGG Q G P G P G G AG G G+ GG P PP
Sbjct: 88 GGGGCQCAAQASGCPAGPPGPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPGPP 145
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = -2
Query: 1115 GGGXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGXGNX---XRMGGXXPXKPP 951
GGG Q G P G P G G AG G G+ GG P PP
Sbjct: 88 GGGGCQCAAQASGCPAGPPGPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPGPP 145
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 5.0
Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Frame = +1
Query: 994 PXPPFF--PAXPXXXXKPPXKGXPXXGGGAPPXXXLLXGXPPPXLKXLF*YPXPXPXXXX 1167
P P FF P P PP GG PP + G PP + P P P
Sbjct: 59 PKPSFFIPPPVPNGFIPPPP-----GPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGA 113
Query: 1168 XPPXPXFXGXSXXNXAXGFXPPPP 1239
PP P G G P PP
Sbjct: 114 PPPPPPPSG-------LGVAPQPP 130
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 5.0
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 10/77 (12%)
Frame = +1
Query: 1039 PPXKGXPXXGGGAPPXXXL-------LXGXPPPXLKXLF*Y---PXPXPXXXXXPPXPXF 1188
PP G P GAPP G PPP + P P PP F
Sbjct: 338 PPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAF 397
Query: 1189 XGXSXXNXAXGFXPPPP 1239
G+ PPPP
Sbjct: 398 GAPQGPGGPGGYGPPPP 414
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +3
Query: 1347 PPKXXPXXFXFFPAXXPXPPPXVXXXPXXLXFXQXXPPXXLX----FXXPPGXPXILXXX 1514
PP P P PPP + PP L F PP P
Sbjct: 89 PPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVP---PPMSLLGPPPFSVPPSVPPPTSSA 145
Query: 1515 AXPLPPPPP 1541
A P+ PPPP
Sbjct: 146 AAPIVPPPP 154
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +3
Query: 1347 PPKXXPXXFXFFPAXXPXPPPXVXXXPXXLXFXQXXPPXXLX----FXXPPGXPXILXXX 1514
PP P P PPP + PP L F PP P
Sbjct: 112 PPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVP---PPMSLLGPPPFSVPPSVPPPTSSA 168
Query: 1515 AXPLPPPPP 1541
A P+ PPPP
Sbjct: 169 AAPIVPPPP 177
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +3
Query: 1347 PPKXXPXXFXFFPAXXPXPPPXVXXXPXXLXFXQXXPPXXLX----FXXPPGXPXILXXX 1514
PP P P PPP + PP L F PP P
Sbjct: 362 PPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVP---PPMSLLGPPPFSVPPSVPPPTSSA 418
Query: 1515 AXPLPPPPP 1541
A P+ PPPP
Sbjct: 419 AAPIVPPPP 427
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -2
Query: 1109 GXPXKRXQXGGAPPPSX-GXPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKP 954
G P + Q GG+ P G P G G G G GN GG P
Sbjct: 224 GGPGQPGQSGGSGTPGQPGAPGAPGHPGQAGTPGTPGAPGNSGAPGGDAAYCP 276
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -3
Query: 1540 GGGGGRGXAXXXRXXGXPGGXXKXRXXGGXXXKKXRXXGXXXTXGGGXGXFAG 1382
G GGG G R G GG + GG G GG G F G
Sbjct: 813 GRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGSGGGGGFGG 865
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical protein
C50B6.4 protein.
Length = 291
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/53 (28%), Positives = 18/53 (33%)
Frame = -2
Query: 1109 GXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKPP 951
G P + Q P + G P G G G +GG G G P P
Sbjct: 190 GAPGQDGQRSTGTPGAAGAPGPAGPAGQDGQPGSDGGPGEAGAPGAPGPDGQP 242
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical protein
F57B7.3 protein.
Length = 295
Score = 29.1 bits (62), Expect = 8.8
Identities = 14/53 (26%), Positives = 19/53 (35%)
Frame = -2
Query: 1109 GXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKPP 951
G P + + G P + G P G G G++G G G P P
Sbjct: 192 GRPGQNGRRGRGTPGAPGAPGAAGAPGNNGQPGQDGAPGQAGAPGASGPDGQP 244
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical protein
B0024.2 protein.
Length = 297
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -2
Query: 1109 GXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGXGNXXRMG-GXXPXKPPMXG 942
G P K + G P + G P G G G+ G G + G G P +P G
Sbjct: 206 GNPGKDGRKGRGHPGTAGRPGQPGKQGSAGNPGRKGERGQDGQPGPGGRPGQPGNRG 262
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical protein
T06E4.6 protein.
Length = 290
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = -2
Query: 1109 GXPXKRXQXGGAPPPS-XGXPXXGGFXXXXGXAGKNGGXGNXXRMGGXXPXKP 954
G P + Q GGA P G P G G G+ G GN GG P
Sbjct: 214 GGPGQPGQSGGAGAPGPAGAPGAPGGPGQPGQDGQPGAPGNDGAPGGDAAYCP 266
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 8.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 1540 GGGGGRGXAXXXRXXGXPGGXXKXRXXGG 1454
GGGGGRG R G GG + GG
Sbjct: 99 GGGGGRGGGGGGRGGGGGGGGGRGGGGGG 127
>AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen protein
107, isoform a protein.
Length = 256
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -2
Query: 1115 GGGXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGXG 993
G G G A PP G P G G AGKNGG G
Sbjct: 81 GCGAQPNNCPAGPAGPP--GAPGAPGEDGTPGQAGKNGGNG 119
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -2
Query: 1115 GGGXPXKRXQXGGAPPPSXGXPXXGGFXXXXGXAGKNGGXG 993
G G G A PP G P G G AGKNGG G
Sbjct: 81 GCGAQPNNCPAGPAGPP--GAPGAPGEDGTPGQAGKNGGNG 119
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 8.8
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +1
Query: 856 PPRLXXXPXXXXPXKXXFXFXPPKKXXXXPXMGGXXGKXPPILXXFPXPPFFPAXPXXXX 1035
PP P P F F PP + P G+ P P PP F P
Sbjct: 278 PPHPMHHPYAMMPPPFGF-FPPPPRGHFPPPPPHFMGRGMPP-PFMPPPPHFGMGPPRGF 335
Query: 1036 KPPXKGXPXXGGGAPP 1083
PP GG PP
Sbjct: 336 MPPPHPMMFRGGPYPP 351
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 8.8
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +1
Query: 856 PPRLXXXPXXXXPXKXXFXFXPPKKXXXXPXMGGXXGKXPPILXXFPXPPFFPAXPXXXX 1035
PP P P F F PP + P G+ P P PP F P
Sbjct: 278 PPHPMHHPYAMMPPPFGF-FPPPPRGHFPPPPPHFMGRGMPP-PFMPPPPHFGMGPPRGF 335
Query: 1036 KPPXKGXPXXGGGAPP 1083
PP GG PP
Sbjct: 336 MPPPHPMMFRGGPYPP 351
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,557,018
Number of Sequences: 27780
Number of extensions: 590591
Number of successful extensions: 2231
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2003
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4442168344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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