Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_C03_e595_05.seq
         (1527 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    29   0.47 
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           26   3.3  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    26   3.3  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   4.4  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   5.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   5.8  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   5.8  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   7.6  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 28.7 bits (61), Expect = 0.47
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = +3

Query: 531 CSHHTSCTTLLW----SSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYAT 671
           CS H+S   + +    S+ NA   +   + C   C +KH   C GL + +T
Sbjct: 22  CSCHSSVCAVSFVMQCSTCNAPTDSANSVSCAGVCGSKHHTHCTGLSRDST 72


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +3

Query: 582 ANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRS 731
           AN+ Y PM+C +   +  +++   L ++  +  SS+ SS++   +  S S
Sbjct: 79  ANSHYEPMECHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSS 128


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = +3

Query: 528 LCSHHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTL 677
           +C    +CT ++ S       +     C T C    + T + + KY+T L
Sbjct: 36  MCREMRACTVMVSSDRKRLTASSAVNACLTRCAFTDAVTTVEVSKYSTRL 85


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 721 SLGARPITGQQGVAGTAGSIRAPL-VTQSSRPAGYKYTANMRNPPAPQPA 867
           S+G  P TG  G A  +GS+ A   V+   +  GY   +N ++  A  PA
Sbjct: 347 SMGNDPQTGMGGPASMSGSLSATSPVSPHLQQNGYVSASNGQSAQAGGPA 396


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 304 SKGFGFVCFSSPEEATKAVTE 366
           +KGF FV  +SPEEA K V E
Sbjct: 427 NKGF-FVQINSPEEAKKKVVE 446


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 1503 GGGXGGXGGPXXXTXGG 1453
            G G GG GGP   + GG
Sbjct: 838  GAGGGGAGGPLRGSSGG 854


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 543 TSCTTLLWSSTNAANTTYTPMDCPT 617
           T+ TT +W+ + A  TT+ P    T
Sbjct: 182 TTTTTTVWTDSTATTTTHAPTTTTT 206


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +1

Query: 184 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCF-SSPEEATKAV 360
           Q ++L    LDD I    L+     FGT ++     ++G+     +  +   PE + + V
Sbjct: 19  QLISLIFVFLDDAIVANPLKNRCLQFGTTSTTNTQQQNGQEFVDDYDSYDDQPEPSDEPV 78

Query: 361 TEMNGRIVGT 390
            E N   V T
Sbjct: 79  FEKNVSTVAT 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,262,439
Number of Sequences: 2352
Number of extensions: 24100
Number of successful extensions: 62
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 179220195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)