Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_C02_e587_06.seq
         (1511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   7.6  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   10.0 

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 215 RLEDLHQLQRPYAFHRRYGACAHPPLQ 135
           R+E + +L    AF R +GA + PP +
Sbjct: 846 RIESIQRLFTRVAFRRLFGAASLPPYE 872


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.2 bits (50), Expect = 10.0
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -3

Query: 513 RILDARLGPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPR 379
           RI+DA          P +  G + APLR++   + +++A++M PR
Sbjct: 394 RIVDALFPVHPPVEWPDLGVG-NMAPLRSIGLTELDQIAASMHPR 437


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,121,735
Number of Sequences: 2352
Number of extensions: 20303
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 177188220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)