Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_C01_e579_05.seq
         (1591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   158   4e-40
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   3.4  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    25   6.0  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  158 bits (384), Expect = 4e-40
 Identities = 80/154 (51%), Positives = 96/154 (62%)
 Frame = +3

Query: 228 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 407
           NPLFEKR KN+ IGQ++QP RDLSRFV+WPKYIRIQR +A+LQ+RLK+PPPINQFTQTLD
Sbjct: 35  NPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLD 94

Query: 408 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTQHCYQACL 587
           K TA+ + K  +KYRPE                    +EPP KR N LR G     +  +
Sbjct: 95  KPTAQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQGINSVVK-MV 153

Query: 588 RXXXAQLVVIRS*RRPNRTXASFLPALCXKMVXP 689
               AQLV+I     P      +LPALC KM  P
Sbjct: 154 EQKKAQLVIIAHDVDPIELVV-YLPALCRKMGVP 186


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 323 YSHPASKGCVTASSQSAAANQPVHP 397
           + HP   G + A SQ     QPVHP
Sbjct: 165 HHHPGLTGLMQAPSQQQQHLQPVHP 189


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 6.0
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +3

Query: 312 WPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 458
           W  ++    +    + RLKV     + T+T+++  A+ +   L ++RPE
Sbjct: 216 WKLFLMTSYRSVARKLRLKVCS--RELTETVERVAAEAINSKLHEHRPE 262


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,827
Number of Sequences: 2352
Number of extensions: 12361
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 68
effective length of database: 404,043
effective search space used: 186263823
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)