Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_B12_e666_04.seq
         (1475 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    24   3.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    24   3.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   4.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   7.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   7.6  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 891 WYXDCXAXGTXACGXGKPLLKSXXTRGPNXXLG 989
           W+ +C A G  A      L K+  +R P   LG
Sbjct: 225 WFINCTAKGRVAVWMCNNLHKALESRNPAKILG 257


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 891 WYXDCXAXGTXACGXGKPLLKSXXTRGPNXXLG 989
           W+ +C A G  A      L K+  +R P   LG
Sbjct: 225 WFINCTAKGRVAVWMCNNLHKALESRNPAKILG 257


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
 Frame = +2

Query: 188 YDLLIIINYFQILRGPF-----------IYNTHKFFCSYV*LNVSFYF*LSRNIIVVPII 334
           Y+ L  I Y  +L GP            +  T+K+ C+++   + FY     ++ V+ + 
Sbjct: 287 YNTLFFIVYVSLLLGPHPTYFGKTGRKTVLKTNKY-CNFI---ILFYL----SVFVILVY 338

Query: 335 FRNYKQMVQR*THKALYNRNSFTNLL 412
           + +  +     T+  LYN N+F  LL
Sbjct: 339 YASLDETPNPVTNGKLYNFNTFAKLL 364


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -3

Query: 426 LSFSCNKFVKEFLLYNALCVHLCTICL*FRNIIGTTMI 313
           LS + N   + F++ +  C  +  IC     I+GT  I
Sbjct: 23  LSITPNYDFENFVIISPRCDKISAICFLLSTILGTCWI 60


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 446 TFFLKKFLVFHVINS*KNFYYTMPYVFTF 360
           TFFLK   V+HV N     Y     VF+F
Sbjct: 14  TFFLKALTVWHVENPTYRLYKIF-VVFSF 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,375
Number of Sequences: 336
Number of extensions: 4823
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44145175
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)