Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_B10_e650_04.seq
         (1538 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    25   2.3  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   7.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   9.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   9.3  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
 Frame = +2

Query: 491 IADNSIPGHVINTYCWITYTFTLPNAQSK------GMVHPGLGNPTDED 619
           I+D+     + N Y W    F  PN  +K      G   PG   P D D
Sbjct: 15  ISDSQAQEKLKNIYSWKALEFAFPNGYAKLAAIKSGSYIPGASLPIDVD 63


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 513 PGMELSAIHDIGSPIRLLAVTRIQHRNNIADV 418
           PGM LS    +GSP R L   R +   ++  V
Sbjct: 205 PGMALSQFDLMGSPYRNLTFVRREGEFSVLQV 236


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 561 LMHNQKEWSTRALETLPMKIDESI 632
           L  N+K WST  +E L    +E I
Sbjct: 86  LQANEKPWSTLPIEDLTKSDNEDI 109


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 561 LMHNQKEWSTRALETLPMKIDESI 632
           L  N+K WST  +E L    +E I
Sbjct: 124 LQANEKPWSTLPIEDLTKSDNEDI 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 337,151
Number of Sequences: 438
Number of extensions: 7631
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 53950875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)