Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_B08_e634_04.seq
(1525 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 83 7e-17
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 79 2e-15
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 76 1e-14
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 64 6e-11
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 55 3e-08
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 48 3e-06
SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual 30 0.73
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 29 1.3
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 28 3.0
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 28 3.9
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 28 3.9
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 28 3.9
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 28 3.9
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 27 6.8
SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces pomb... 27 6.8
SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces pom... 27 9.0
SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase Rdp1|Schizosa... 27 9.0
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 83.4 bits (197), Expect = 7e-17
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Frame = +3
Query: 246 FTLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLL 425
FTL NG ++P+IGL T++ G T V ALKAGYR DTA +YGNE + ++
Sbjct: 15 FTLPNGDKIPSIGLGTWRSGKDETK-NAVCAALKAGYRHIDTAHIYGNEKEIGEGIRES- 72
Query: 426 PKYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNP-----GIYK 590
+ R DI++ SKL CN + A TL +L L+YID YL+H P G +
Sbjct: 73 ---GVPRTDIWVTSKLW-CNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEE 128
Query: 591 LDFENRNSSRIR-----KQTWATLVDLYHDHKIRALGVSNY 698
L N I ++TW + +L K+R +G+SN+
Sbjct: 129 LP-RNEKGELIYEDVPIEETWQAMEELLETGKVRYIGISNF 168
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 78.6 bits (185), Expect = 2e-15
Identities = 53/150 (35%), Positives = 74/150 (49%)
Frame = +3
Query: 249 TLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLP 428
TL NG+ +P IG F + + V AL +GYR DTAA+YGNE A
Sbjct: 12 TLTNGMVIPRIGFGAFML-KYNECYGLVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCE 70
Query: 429 KYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFENR 608
K +KR DIF+ SKL C+ T A ++L +LG YIDL+L+ +P
Sbjct: 71 KNNVKRTDIFLTSKLANCS--DYYSTRAAIRSSLHHLG-TYIDLFLIQSPA--------- 118
Query: 609 NSSRIRKQTWATLVDLYHDHKIRALGVSNY 698
+ R +W + + IR++GVSNY
Sbjct: 119 GGKKSRIASWKAMEEFVDSGDIRSVGVSNY 148
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 76.2 bits (179), Expect = 1e-14
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Frame = +3
Query: 246 FTLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLL 425
FTL +G ++P +GL T++ T V AL+ GYR D AA+YGNE + K+
Sbjct: 16 FTLADGSKIPGLGLGTWRSEPNQTK-NAVKTALQYGYRHIDAAAIYGNEDEVGDGIKES- 73
Query: 426 PKYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFE- 602
+ R DI++ SKL CN +A TL +L LDY+D YL+H P +K +
Sbjct: 74 ---GVPRKDIWVTSKLW-CNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDK 129
Query: 603 ---NRNSSRIR-----KQTWATLVDLYHDHKIRALGVSNY 698
+++ + I ++TW + L K+R +G+SN+
Sbjct: 130 FPKDKDGNLIYEKNPIEETWKAMEKLLETGKVRHIGLSNF 169
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 63.7 bits (148), Expect = 6e-11
Identities = 47/149 (31%), Positives = 72/149 (48%)
Frame = +3
Query: 252 LNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLPK 431
LNNG++ P ++ + +V AL+ GYR D+A +Y NE A K + +
Sbjct: 8 LNNGLKCPQFAYGSYMVNRT-KCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFMEE 66
Query: 432 YKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFENRN 611
KR DI+ SKL + G T + ++ GL YIDL+L+H+P
Sbjct: 67 TGTKREDIWFTSKL--NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSP----------Y 114
Query: 612 SSRIRKQTWATLVDLYHDHKIRALGVSNY 698
RI ++W L + K+RA+GVSN+
Sbjct: 115 GDRI--ESWKALEKGVEEGKLRAIGVSNF 141
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 54.8 bits (126), Expect = 3e-08
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Frame = +3
Query: 264 VEMPAIGLDT--FKM--GHFY-TVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLP 428
+ +PA G+ T FK G T++ +V +AL AG+ D A +YGNE + A K+
Sbjct: 10 IPVPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALKEA-- 67
Query: 429 KYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNP 578
+ R +FI SK++ + + E A + +L LG DY+DLYL+H+P
Sbjct: 68 --NVPRSKLFITSKVM---HNVDNIPE-ALNESLRKLGTDYLDLYLLHSP 111
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 48.0 bits (109), Expect = 3e-06
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +3
Query: 324 QTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLPK-YKLKRGDIFIISKLLPCNYGGGA 500
Q V +AL G R+ D+A Y NE A + + +KR DI +I+K+ P + G
Sbjct: 28 QQVIEALSLGIRVIDSAITYRNEKECEQAIQDFCHQNVNIKREDITLITKI-PDSLQGFE 86
Query: 501 VTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFENRNSSRIRKQTWATLVDLYHDHKIRA 680
T +A +L G +D+ L+H+P + R R ++W L+ + +I
Sbjct: 87 RTWKAVEQSLRRTGRPKLDVVLIHSP-----KWPVR-----RIESWRALLQHQKEGRINK 136
Query: 681 LGVSNYFI 704
+GVSNY I
Sbjct: 137 IGVSNYNI 144
>SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 30.3 bits (65), Expect = 0.73
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = -2
Query: 507 QSLHHHRNYMEVIYLL*ICPLSSIYTLV 424
+ +H H+ Y E+++++ C +S+YT +
Sbjct: 169 EQIHQHKRYNEILFMVDTCQANSLYTKI 196
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 29.5 bits (63), Expect = 1.3
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Frame = +3
Query: 351 GYRMFDTAALYGN---EVYLNFAFKKL---LPKYKLKRGDIFIISKLLPCNYG-GGAVTE 509
G FDTA +Y N E + A K+L +Y + F LP G
Sbjct: 57 GINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHII 116
Query: 510 RAFHNTLSNLGLDYIDLYLVHNP 578
+ +L LGL Y+D+ + H P
Sbjct: 117 EGLNASLKRLGLPYVDVIMAHRP 139
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 507 ERAFHNTLSNLGLDYIDLYLVH 572
E+A +L LG+D IDLY VH
Sbjct: 105 EKALDLSLKRLGIDCIDLYYVH 126
>SPBC1348.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +3
Query: 249 TLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLP 428
TL +E + K FY+V + +D YR+F +Y L F + +P
Sbjct: 144 TLQECIEEYVFSSECIKYRQFYSVYEIIDFLRTNFYRLF---VIY---CALGFGITRTVP 197
Query: 429 KYKLKRGDIFIIS 467
KY + +G +I+
Sbjct: 198 KYLMIKGISIVIA 210
>SPBPB2B2.19c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +3
Query: 249 TLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLP 428
TL +E + K FY+V + +D YR+F +Y L F + +P
Sbjct: 144 TLQECIEEYVFSSECIKYRQFYSVYEIIDFLRTNFYRLF---VIY---CALGFGITRTVP 197
Query: 429 KYKLKRGDIFIIS 467
KY + +G +I+
Sbjct: 198 KYLMIKGISIVIA 210
>SPAC977.01 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1||Partial|Manual
Length = 316
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +3
Query: 249 TLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLP 428
TL +E + K FY+V + +D YR+F +Y L F + +P
Sbjct: 116 TLQECIEEYVFSSECIKYRQFYSVYEIIDFLRTNFYRLF---VIY---CALGFGITRTVP 169
Query: 429 KYKLKRGDIFIIS 467
KY + +G +I+
Sbjct: 170 KYLMIKGISIVIA 182
>SPAC750.05c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +3
Query: 249 TLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLP 428
TL +E + K FY+V + +D YR+F +Y L F + +P
Sbjct: 144 TLQECIEEYVFSSECIKYRQFYSVYEIIDFLRTNFYRLF---VIY---CALGFGITRTVP 197
Query: 429 KYKLKRGDIFIIS 467
KY + +G +I+
Sbjct: 198 KYLMIKGISIVIA 210
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 603 NRNSSRIRKQTWATLVDLYHDHKIRALGVSNYFIWGSYG 719
N + R+R LV+L+ + +R+L + YF G +G
Sbjct: 709 NASMVRLRSTFNEELVELFENMAVRSLNRAEYFCTGDFG 747
>SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 339
Score = 27.1 bits (57), Expect = 6.8
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -3
Query: 644 SSPSLFSNSGTVPIFKIQFINSRVMDQI 561
+SP F N+ T P+ + ++N++++D I
Sbjct: 96 TSPGDFENASTSPVSDVTYVNTKLVDFI 123
>SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 636 WATLVDLYHDHKIRALGVSNYFIW 707
WAT VDLY + I L + + F+W
Sbjct: 110 WATEVDLYGNPPILKLQLRDSFVW 133
>SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase
Rdp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1215
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 516 FHNTLSNLGLDYID--LYLVHNPGIYKLDF-ENRNSSRIRKQTWATLVDLYHDH 668
FH+ + ++G DY D + LV L F +++N++ R QT+ T L+ H
Sbjct: 239 FHSIIGDVGTDYYDDHISLVFRFRFSPLIFRKSKNATESRVQTFWTASHLWRRH 292
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,834,377
Number of Sequences: 5004
Number of extensions: 90902
Number of successful extensions: 232
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 854316994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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