Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_B08_e634_04.seq
(1525 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 7e-14
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 1e-13
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 66 7e-11
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 64 4e-10
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 2e-08
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 48 3e-05
SB_28961| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.8
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 76.2 bits (179), Expect = 7e-14
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Frame = +3
Query: 252 LNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLPK 431
LNNG+EMP +GL T+K V V A+K GYR D A Y NE + A ++LL
Sbjct: 6 LNNGLEMPVLGLGTWKSKPGQ-VENAVKFAIKEGYRHIDCAYAYRNEKEVGDALRELLGS 64
Query: 432 YKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLD---FE 602
++R D+FI SKL + V ++L +LGLDY+DLYL+H P ++ F
Sbjct: 65 V-VERKDLFITSKLWNTKHNPKDVRSNCV-DSLKDLGLDYLDLYLIHWPLSFRDGDEFFP 122
Query: 603 NRNSSRIRK------QTWATLVDLYHDHKIRALGVSNY 698
+ TW + L + ++A+G+SN+
Sbjct: 123 KDEQGNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNF 160
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 75.4 bits (177), Expect = 1e-13
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Frame = +3
Query: 237 PQQFTLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFK 416
P L +G MP +G T +G L V AL+ GYR+ DTA Y
Sbjct: 326 PADVLLASGYTMPVMGFGTATLGE--DTLSVVKTALETGYRLIDTAQGYPLS---EPQVA 380
Query: 417 KLLPKYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGI--YK 590
K + + R DIFII+KL P Y G T ++ +L L DYIDL+L+H+ +
Sbjct: 381 KAIADSGIPRKDIFIITKLHP-RYLGYEPTLKSVEMSLRALSTDYIDLFLIHSKTCDDFL 439
Query: 591 LDFENRNSSRIRKQTWATLVDLYHDHKIRALGVSNY 698
L K++W + +L+ KIR+LGVSN+
Sbjct: 440 LTCAEGEPRGTWKESWKAMEELHRQGKIRSLGVSNF 475
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 66.1 bits (154), Expect = 7e-11
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Frame = +3
Query: 339 ALKAGYRMFDTAALYGNEVYLNFAFKKLLPKYKLKRGDIFIISKLLPCNYGGGAVTERAF 518
A++ GYR D A +YGNE + A ++L + K+KR ++F+ SKL C+ A
Sbjct: 74 AIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKLW-CDSHHPDDVLPAC 132
Query: 519 HNTLSNLGLDYIDLYLVHNPGIYKLDFENRNS---------SRIRKQTWATLVDLYHDHK 671
TL NL LDY+DLYL+H P +K +S + TW + L
Sbjct: 133 QATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQNTWQAMEGLVAKGL 192
Query: 672 IRALGVSNYFI 704
+A+GVSN+ +
Sbjct: 193 CKAIGVSNFSV 203
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 63.7 bits (148), Expect = 4e-10
Identities = 48/151 (31%), Positives = 80/151 (52%)
Frame = +3
Query: 252 LNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLPK 431
+N+G ++P +GL H Q V AL++GYR+ DTA+ Y NE + A +
Sbjct: 70 MNDGRKIPLLGLGA----HDIHSKQAVLWALESGYRLIDTASRYHNEQSVGEAVRCS--- 122
Query: 432 YKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFENRN 611
+ R +I++++K+ +G + AF+ +L+ LGL Y+DLYL+H P
Sbjct: 123 -NIPRCEIYVVTKVYFTEHGYKETMD-AFYKSLTRLGLGYVDLYLIHFP----------V 170
Query: 612 SSRIRKQTWATLVDLYHDHKIRALGVSNYFI 704
S + +W ++DL IR++GVSN+ I
Sbjct: 171 PSGV-VGSWQAMIDLRSRGLIRSIGVSNFNI 200
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 58.0 bits (134), Expect = 2e-08
Identities = 42/120 (35%), Positives = 62/120 (51%)
Frame = +3
Query: 339 ALKAGYRMFDTAALYGNEVYLNFAFKKLLPKYKLKRGDIFIISKLLPCNYGGGAVTERAF 518
ALK GYRM DTA +Y NE + A + K LKR DI++ +KL P G + A
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVR----KSGLKREDIYVTTKLKPSEEGHSNALKYA- 107
Query: 519 HNTLSNLGLDYIDLYLVHNPGIYKLDFENRNSSRIRKQTWATLVDLYHDHKIRALGVSNY 698
++ L + Y+DL+L+H P R + I + L+ L + IR++GVSN+
Sbjct: 108 KESIKKLDIGYVDLFLIHTP---------RPGNII--AAYDALLTLKEEGLIRSVGVSNF 156
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 47.6 bits (108), Expect = 3e-05
Identities = 32/97 (32%), Positives = 55/97 (56%)
Frame = +3
Query: 249 TLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLP 428
TL++G ++P GL + + +T Q V AL+ GYRM DTAA Y NE + A L
Sbjct: 2 TLSDGYKIPRFGLGLYDLDEKHTK-QAVLWALENGYRMIDTAASYNNEKRVGEA----LR 56
Query: 429 KYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNL 539
+ + R ++++++K+ ++ G T +A+ +LS L
Sbjct: 57 ESAVPRSEVYLVTKVYHTDH-GYEKTMKAYDRSLSAL 92
>SB_28961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1
Query: 46 PAARGIH*XLXRPPP 2
PAARGIH L RPPP
Sbjct: 14 PAARGIHYVLERPPP 28
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,239,354
Number of Sequences: 59808
Number of extensions: 699414
Number of successful extensions: 3157
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3131
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4953341894
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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