Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_B08_e634_04.seq
(1525 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 108 1e-23
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 108 1e-23
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 107 2e-23
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 106 4e-23
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 102 6e-22
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 98 2e-20
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 95 9e-20
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 89 1e-17
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 86 5e-17
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 70 5e-12
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 70 5e-12
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 59 9e-09
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 58 2e-08
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 29 8.7
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 29 8.7
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 29 8.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 8.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 8.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 8.7
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 29 8.7
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 108 bits (259), Expect = 1e-23
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
Frame = +3
Query: 222 FKYILPQQFTLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYL 401
F ++ F ++G EMP IGL ++ + +++ ALK+GYR FDTA LY NE +L
Sbjct: 4 FTNVVGGAFKFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFL 63
Query: 402 NFAFKKLLPKYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNP- 578
+ KK LP++ L R D+FI +K+ N TE+ N+L+ L DY+DL L+H P
Sbjct: 64 GNSLKKYLPQFGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPR 123
Query: 579 --GIYKLDFENRNSSRIRKQTWATLVDLYHDHKIRALGVSNYFIW 707
D N SR RK W TL ++R++GVSNY ++
Sbjct: 124 DRDTGNDDDYEINKSR-RKIVWQTLEKAKESGRVRSIGVSNYEVY 167
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 108 bits (259), Expect = 1e-23
Identities = 59/155 (38%), Positives = 91/155 (58%)
Frame = +3
Query: 240 QQFTLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKK 419
+++ NN MP IG+ T+++ + Q +D K GYR DTA +Y NE + +K
Sbjct: 4 REYVKNN---MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEK 60
Query: 420 LLPKYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDF 599
LLP LKR DI+I SKL P N G E + +LSNL ++Y+DL L+H PG L
Sbjct: 61 LLPANGLKREDIWITSKLAPSNAGVKKARE-SIEESLSNLKVEYLDLLLIHWPG-SSLKS 118
Query: 600 ENRNSSRIRKQTWATLVDLYHDHKIRALGVSNYFI 704
EN + ++R ++W + ++ + K+R++GVSN+ I
Sbjct: 119 ENPANKKLRVESWNVMCEMMAEGKLRSVGVSNFEI 153
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 107 bits (258), Expect = 2e-23
Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Frame = +3
Query: 246 FTLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLL 425
F L NG E+P + L T++ + VD+ALK GYR FDTA Y NE L A K LL
Sbjct: 2 FKLKNGQEIPKLALGTYE-AKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLL 60
Query: 426 PKYKLKRGDIFIISKLLPCNYGGGA-VTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFE 602
P++ + DI++ SK+ P + A + + + +L L Y+DL LVH P +
Sbjct: 61 PRHNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPRPLDTEDL 120
Query: 603 NRNSSRIRKQTWATLVDLYHDHKIRALGVSNY 698
N N+ RK TW L L+ + KIR++GVSNY
Sbjct: 121 NENNKMYRKDTWIALEKLHAEGKIRSIGVSNY 152
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 106 bits (255), Expect = 4e-23
Identities = 61/151 (40%), Positives = 83/151 (54%)
Frame = +3
Query: 252 LNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLPK 431
LN+G +P +G T+K+ V +D AL AGYRMFDTA Y NE L A K LLPK
Sbjct: 15 LNSGYNIPFVGFGTYKVTG-ENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPK 73
Query: 432 YKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFENRN 611
+ L R D+F+ SK P + +L +L DYID+YLVH P D ++ N
Sbjct: 74 HGLSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPKPNDSDNDDVN 133
Query: 612 SSRIRKQTWATLVDLYHDHKIRALGVSNYFI 704
++ RK + L + K+R++GVSNY I
Sbjct: 134 NAEYRKIAYEVLEEAKAAGKVRSIGVSNYEI 164
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 102 bits (245), Expect = 6e-22
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Frame = +3
Query: 252 LNNGVEMPAIGLDTFKM-GHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLP 428
LN G + P IGL T+K+ G VL +D AL AGYR+FDTA +Y NE + A + LLP
Sbjct: 5 LNTGYDCPLIGLGTYKIIGD--QVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLP 62
Query: 429 KYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFENR 608
K+ LKR DIFI +K+ P ++ +LS L YID+YL+H P + ++
Sbjct: 63 KHNLKREDIFITTKMHPNTVEN---VKKLVDESLSLLKTSYIDMYLIHYPKSFDYGDQDP 119
Query: 609 NSSRIRKQTWATLVDLYHDHKIRALGVSNYFI 704
+ +R TW L + + KIR++GVS++ I
Sbjct: 120 MNKTLRIATWNDLWECKNAGKIRSVGVSSFEI 151
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 97.9 bits (233), Expect = 2e-20
Identities = 61/151 (40%), Positives = 83/151 (54%)
Frame = +3
Query: 246 FTLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLL 425
FTL+NGV MP+IGL T++M + +A+ AGYR DTA LY NE + A +L
Sbjct: 8 FTLSNGVLMPSIGLGTWQMTG-EEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALAELF 66
Query: 426 PKYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFEN 605
+ LKR DIFI +K C+ V E A N+L L LDY+DLYL H P K D
Sbjct: 67 AEGILKREDIFITTKAF-CHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKDDGSF 125
Query: 606 RNSSRIRKQTWATLVDLYHDHKIRALGVSNY 698
R+ ++ + W +Y +A+GVSN+
Sbjct: 126 RSDVKV-EDIWRGFEKVYGLGLTKAIGVSNF 155
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 95.5 bits (227), Expect = 9e-20
Identities = 55/149 (36%), Positives = 82/149 (55%)
Frame = +3
Query: 252 LNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLPK 431
L+NGVEMP IGL T++ V+ V A+KAGYR+ DTA++Y NE + A K+LL +
Sbjct: 10 LSNGVEMPVIGLGTWQSSPA-EVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEE 68
Query: 432 YKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFENRN 611
+KR ++FI +K G + E +L L L+Y+DLYL H P + D
Sbjct: 69 GVVKREELFITTKAWTHELAPGKL-EGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHI 127
Query: 612 SSRIRKQTWATLVDLYHDHKIRALGVSNY 698
+S + + W +Y +A+GVSN+
Sbjct: 128 ASPV-EDVWRQFDAVYKAGLAKAVGVSNW 155
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 88.6 bits (210), Expect = 1e-17
Identities = 56/153 (36%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Frame = +3
Query: 252 LNNGVEMPAIGLDTFKMGHFY--TVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLL 425
L+N VEMP IGL T G +Y VL ++ K GYR+ DTA YG E L A K
Sbjct: 7 LSNNVEMPLIGLGTTHSGGYYHDAVLHSIK---KCGYRLIDTAKRYGVEKQLGIAVKNC- 62
Query: 426 PKYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFEN 605
+ R ++F+ +KL P + G AF + L DY+D+Y++H P +L
Sbjct: 63 ---SVPREEMFLSTKLWPVDCGDEVYN--AFQTSCEKLQTDYLDMYMIHMP---QLPDWI 114
Query: 606 RNSSRIRKQTWATLVDLYHDHKIRALGVSNYFI 704
N +++TW + LY D +R++GVSNY I
Sbjct: 115 VNQKETKEKTWRQMELLYEDEHVRSIGVSNYSI 147
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 86.2 bits (204), Expect = 5e-17
Identities = 57/159 (35%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Frame = +3
Query: 252 LNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLPK 431
LN G ++P GL T+++ + + AL AGYR+ DTA LY NE + + +
Sbjct: 8 LNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISS 67
Query: 432 YKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKLD----- 596
KLKR DIF+ SKL P + + L L L+YIDLYL+H P +K
Sbjct: 68 GKLKREDIFVTSKL-PFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSFA 126
Query: 597 --FENRN---SSRIRKQTWATLVDLYHDHKIRALGVSNY 698
EN + TW L LY + K++ALGVSN+
Sbjct: 127 PLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNF 165
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 69.7 bits (163), Expect = 5e-12
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Frame = +3
Query: 240 QQFTLNNGVEMPAIGLDTF--KMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAF 413
Q LN+G +PAIGL T+ K G ++T A+ AGYR D A +Y N+ + A
Sbjct: 3 QSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKT---AVAAGYRHIDCAHVYQNQKEVGEAL 59
Query: 414 KKLLPKYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKL 593
K++L + K+KR ++FI SK+ + A LS+L L Y+DL L+H P Y
Sbjct: 60 KEILDEGKVKREELFITSKVWN-TFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAE 118
Query: 594 D---FENRNSSRIR------KQTWATLVDLYHDHKIRALGVSNY 698
F + ++R +TW K R++G+SN+
Sbjct: 119 GAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNF 162
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 69.7 bits (163), Expect = 5e-12
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Frame = +3
Query: 240 QQFTLNNGVEMPAIGLDTF--KMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAF 413
Q LN+G +PAIGL T+ K G ++T A+ AGYR D A +Y N+ + A
Sbjct: 3 QSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKT---AVAAGYRHIDCAHVYQNQKEVGEAL 59
Query: 414 KKLLPKYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNPGIYKL 593
K++L + K+KR ++FI SK+ + A LS+L L Y+DL L+H P Y
Sbjct: 60 KEILDEGKVKREELFITSKVWN-TFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAE 118
Query: 594 D---FENRNSSRIR------KQTWATLVDLYHDHKIRALGVSNY 698
F + ++R +TW K R++G+SN+
Sbjct: 119 GAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNF 162
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 58.8 bits (136), Expect = 9e-09
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Frame = +3
Query: 249 TLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLP 428
TLN+G EMP IG T+++ + V DAL+AGYR D+A + N+ + K
Sbjct: 8 TLNSGYEMPVIGYGTWQLPKNLAA-ERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCK 66
Query: 429 KYKLKRGDIFIISKLLPCNYGGGAVTERAFHNTLSNLGLDYIDLYLVHNP---------- 578
K++R ++F+ SK+ + ++ L Y+DL ++H P
Sbjct: 67 IRKVRREELFLSSKIWNTYHSRNRCMQQ-IDEMLEIFETTYMDLIVIHWPFGWAEDEPPG 125
Query: 579 --GIYK--LDFENRNSSRIRKQTWATLVDLYHDHKIRALGVSNYFI 704
G++ + + R S +TW L D + KIR++G++N+ I
Sbjct: 126 ERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNI 171
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 58.0 bits (134), Expect = 2e-08
Identities = 29/75 (38%), Positives = 48/75 (64%)
Frame = +3
Query: 249 TLNNGVEMPAIGLDTFKMGHFYTVLQTVDDALKAGYRMFDTAALYGNEVYLNFAFKKLLP 428
TL+N MPA+GL T++ + V+ V A+K GY + DTA+ Y NE ++ A K+++
Sbjct: 49 TLSNAHSMPAVGLGTWQ-SNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIA 107
Query: 429 KYKLKRGDIFIISKL 473
+ +KR D+FI +K+
Sbjct: 108 EGVVKREDLFITTKV 122
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 41.9 bits (94), Expect = 0.001
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 507 ERAFHNTLSNLGLDYIDLYLVHNPGIYKLDFENRNSSRIRKQTWATLVDLYHDHKIRALG 686
E A ++L L L+Y+DLYL H P + D + S + + W +Y +A+G
Sbjct: 63 EGALRDSLKKLHLEYVDLYLAHMPTAFSDDMSQKIESSV-EDIWRQFDAVYKAGLAKAVG 121
Query: 687 VSNY 698
VSN+
Sbjct: 122 VSNW 125
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
Y37A1B.17b protein.
Length = 1467
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 520 WNALSVTAPPP*LHGSNLLIMNMSPLFNLYFGSSFLKAKFKYTSLP 383
W A + TAPPP L+ + L SP + + G F F SLP
Sbjct: 1214 WGAKTSTAPPP-LYSNTPLDTATSPPVSAFRGVDFQTGVFNPNSLP 1258
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 520 WNALSVTAPPP*LHGSNLLIMNMSPLFNLYFGSSFLKAKFKYTSLP 383
W A + TAPPP L+ + L SP + + G F F SLP
Sbjct: 1214 WGAKTSTAPPP-LYSNTPLDTATSPPVSAFRGVDFQTGVFNPNSLP 1258
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 29.1 bits (62), Expect = 8.7
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = -2
Query: 144 KRIINYKKVNTELT--NSPFKLLTAITD 67
K +I YK VN ELT +S FKLLT D
Sbjct: 381 KNVIGYKMVNFELTTDSSDFKLLTIRVD 408
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 520 WNALSVTAPPP*LHGSNLLIMNMSPLFNLYFGSSFLKAKFKYTSLP 383
W A + TAPPP L+ + L SP + + G F F SLP
Sbjct: 1214 WGAKTSTAPPP-LYSNTPLDTATSPPVSAFRGVDFQTGVFNPNSLP 1258
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 520 WNALSVTAPPP*LHGSNLLIMNMSPLFNLYFGSSFLKAKFKYTSLP 383
W A + TAPPP L+ + L SP + + G F F SLP
Sbjct: 1214 WGAKTSTAPPP-LYSNTPLDTATSPPVSAFRGVDFQTGVFNPNSLP 1258
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 8.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 1435 PPPXGXPPPPXXFXXXGXXXXXXXPTPXPP 1524
PPP G PPPP P P PP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 8.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 1435 PPPXGXPPPPXXFXXXGXXXXXXXPTPXPP 1524
PPP G PPPP P P PP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 8.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 1435 PPPXGXPPPPXXFXXXGXXXXXXXPTPXPP 1524
PPP G PPPP P P PP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 29.1 bits (62), Expect = 8.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 522 CGMLFQSLHHHRNYMEVIYLL*ICPLSSIYTLVAVS*KQNLNTLHC 385
C +LF+ + HR ++ Y L IC ++IY +A S L HC
Sbjct: 434 CELLFRQQNKHR---KLRYYLHICDRAAIYLFIAASYTPWLTLRHC 476
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,815,773
Number of Sequences: 27780
Number of extensions: 566403
Number of successful extensions: 1483
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4379894956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -