Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_B07_e626_03.seq
         (1546 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061199-1|AAL28747.1|  430|Drosophila melanogaster LD15527p pro...    31   5.6  
AE014297-3530|AAF56285.2|  457|Drosophila melanogaster CG5746-PB...    31   5.6  
AE014297-3529|AAF56284.2|  457|Drosophila melanogaster CG5746-PA...    31   5.6  

>AY061199-1|AAL28747.1|  430|Drosophila melanogaster LD15527p
           protein.
          Length = 430

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +2

Query: 17  GGGRSXN*WIPRAAGNSARGNGDMYSRRSPMRGGAPVAGAYDRDPYAQQ 163
           GG  S +  +PR  G   RG  +   +R    G  P  G Y+  PY Q+
Sbjct: 198 GGPGSEHGSMPRRGGPRGRGGYNQALKRGAPGGPGPKRGRYEGGPYGQR 246


>AE014297-3530|AAF56285.2|  457|Drosophila melanogaster CG5746-PB,
           isoform B protein.
          Length = 457

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +2

Query: 17  GGGRSXN*WIPRAAGNSARGNGDMYSRRSPMRGGAPVAGAYDRDPYAQQ 163
           GG  S +  +PR  G   RG  +   +R    G  P  G Y+  PY Q+
Sbjct: 225 GGPGSEHGSMPRRGGPRGRGGYNQALKRGAPGGPGPKRGRYEGGPYGQR 273


>AE014297-3529|AAF56284.2|  457|Drosophila melanogaster CG5746-PA,
           isoform A protein.
          Length = 457

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +2

Query: 17  GGGRSXN*WIPRAAGNSARGNGDMYSRRSPMRGGAPVAGAYDRDPYAQQ 163
           GG  S +  +PR  G   RG  +   +R    G  P  G Y+  PY Q+
Sbjct: 225 GGPGSEHGSMPRRGGPRGRGGYNQALKRGAPGGPGPKRGRYEGGPYGQR 273


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,228,987
Number of Sequences: 53049
Number of extensions: 890972
Number of successful extensions: 2345
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2325
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8656343856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)