Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_B05_e610_03.seq
(1582 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 117 1e-24
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 117 1e-24
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 115 4e-24
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 105 3e-21
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 77 2e-12
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 76 3e-12
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 68 6e-10
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 58 5e-07
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 57 1e-06
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 54 1e-05
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 52 6e-05
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 48 9e-04
UniRef50_A6DI70 Cluster: Beta-D-galactosidase; n=1; Lentisphaera... 43 0.026
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 42 0.034
UniRef50_A0M224 Cluster: Beta-galactosidase; n=1; Gramella forse... 42 0.034
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 41 0.078
UniRef50_A7LU08 Cluster: Putative uncharacterized protein; n=1; ... 40 0.14
UniRef50_Q1II16 Cluster: Glycoside hydrolase family 2, TIM barre... 39 0.32
UniRef50_Q15NH4 Cluster: Glycoside hydrolase family 2, TIM barre... 38 0.73
UniRef50_A5FCG4 Cluster: Beta-galactosidase precursor; n=1; Flav... 37 1.3
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 1.3
UniRef50_A7CVC4 Cluster: Beta-galactosidase; n=1; Opitutaceae ba... 37 1.7
UniRef50_Q8A2G5 Cluster: Beta-galactosidase; n=8; Bacteroidales|... 36 2.2
UniRef50_A3XMD4 Cluster: Beta-galactosidase; n=1; Leeuwenhoekiel... 36 2.9
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 2.9
UniRef50_Q2VT50 Cluster: Beta-galactosidase precursor; n=2; Flav... 36 3.9
UniRef50_UPI0000DC0B84 Cluster: UPI0000DC0B84 related cluster; n... 35 5.1
UniRef50_A4RLN6 Cluster: Putative uncharacterized protein; n=2; ... 35 6.8
UniRef50_O52847 Cluster: Beta-galactosidase; n=3; Bacillus megat... 35 6.8
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 117 bits (281), Expect = 1e-24
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 509 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 667
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEW+
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 78
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 117 bits (281), Expect = 1e-24
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 509 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 667
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEW+
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 60
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 115 bits (276), Expect = 4e-24
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 509 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 667
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR LNGEW+
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWR 120
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 105 bits (252), Expect = 3e-21
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +2
Query: 509 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSL 652
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSL
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSL 69
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 76.6 bits (180), Expect = 2e-12
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +2
Query: 509 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEW 664
L +L RRDWENP +TQ +RL AHPPF SWR+ E A+ DRPS Q ++LNG W
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQTLNGLW 66
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 75.8 bits (178), Expect = 3e-12
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 507 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAK 611
HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVI++
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISE 39
Score = 35.5 bits (78), Expect = 3.9
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 605 SEEARTDRPSQQLRSLNGEWQI 670
SEEARTDRPSQQLRSL +W++
Sbjct: 38 SEEARTDRPSQQLRSL--KWRM 57
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 68.1 bits (159), Expect = 6e-10
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +2
Query: 509 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 667
LA +L R DW+NP +T +NRL +H P WR+++ AR PS + SL+GEWQ
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPSDAVLSLDGEWQ 70
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 58.4 bits (135), Expect = 5e-07
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +2
Query: 518 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNG 658
VL R DW N +T LNRL AHP FASWR+ AR + PS + R L+G
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRRQLDG 63
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 56.8 bits (131), Expect = 1e-06
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = +2
Query: 596 WRNSEEARTDRPSQQLRSLNGEWQIV 673
WRNSEEARTDRPSQQLRSLNGEW+++
Sbjct: 47 WRNSEEARTDRPSQQLRSLNGEWRLM 72
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 54.0 bits (124), Expect = 1e-05
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +2
Query: 518 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEW 664
++ RRDWENP Q+N++ AH P ++ E+AR + SQ+ +SLNG+W
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK-KSLNGQW 54
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 51.6 bits (118), Expect = 6e-05
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -1
Query: 673 YNLPFAIQAAQLLGRAIGAGLFAITPAGERG 581
+ PFAIQAAQLLGRAIGAGLFAITP E G
Sbjct: 8 HQAPFAIQAAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 47.6 bits (108), Expect = 9e-04
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 527 RRDWENPGVTQLNRLAAHPPFASWRNSEEART-DRPSQQLRSLNGEWQ 667
+ DWENP V Q+NRL A S+ E+A T DR ++SLNG+W+
Sbjct: 31 KNDWENPDVIQINRLPARATSYSFDTPEQALTRDRNQSTIQSLNGQWK 78
>UniRef50_A6DI70 Cluster: Beta-D-galactosidase; n=1; Lentisphaera
araneosa HTCC2155|Rep: Beta-D-galactosidase -
Lentisphaera araneosa HTCC2155
Length = 991
Score = 42.7 bits (96), Expect = 0.026
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 536 WENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQIVSVN 682
WENP LN LA PP S+ + E+A S + SLNG W N
Sbjct: 6 WENPQFVSLNTLAPRPPLYSFDSLEKALEQDQSAYIHSLNGSWNFKLFN 54
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 42.3 bits (95), Expect = 0.034
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 518 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 667
+L +DW+NP + + + H P S+R +EAR D + +SLNG+W+
Sbjct: 7 ILLSQDWQNPHIVKWHCRTPHVPLHSYRTEQEARLDVGGNR-QSLNGQWR 55
>UniRef50_A0M224 Cluster: Beta-galactosidase; n=1; Gramella forsetii
KT0803|Rep: Beta-galactosidase - Gramella forsetii
(strain KT0803)
Length = 1049
Score = 42.3 bits (95), Expect = 0.034
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 533 DWENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPSQQLRSLNGEWQ 667
DWENP VT +N+L A S+ N + A S +++SLNG WQ
Sbjct: 26 DWENPAVTGINKLPARATMYSFSNKQAAINLNKENSDRVKSLNGTWQ 72
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 41.1 bits (92), Expect = 0.078
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +2
Query: 530 RDWENPGVTQLNRLAAHPPFASWRNSEEARTDR--PSQQLRSLNGEWQ 667
R+WEN +TQ+NR H P+ ++ + E+A + S+ ++SL+G W+
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQAMSCNRWTSKYVKSLSGIWK 50
>UniRef50_A7LU08 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 1046
Score = 40.3 bits (90), Expect = 0.14
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 524 QRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP--SQQLRSLNGEWQIV 673
Q +WENP + N+ H F + +E+A D+P S SLNG W+ +
Sbjct: 26 QNNEWENPAKYEWNKERPHADFRLYEQAEDAVNDKPRKSSWQHSLNGVWKFI 77
>UniRef50_Q1II16 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 1049
Score = 39.1 bits (87), Expect = 0.32
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 524 QRRDWENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPSQQLRSLNGEWQ 667
Q DWENP V +NR A F + + A R ++PS ++SLNG W+
Sbjct: 21 QTPDWENPRVFGINREAPRATFTPFPDEASALKRREQPSVFMQSLNGMWK 70
>UniRef50_Q15NH4 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Pseudoalteromonas atlantica T6c|Rep: Glycoside
hydrolase family 2, TIM barrel - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 1045
Score = 37.9 bits (84), Expect = 0.73
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 533 DWENPGVTQLNRLAAHPPFASWRNSEEARTDRP--SQQLRSLNGEW 664
DW+NP V +N+ A F + + + D P SQ SLNGEW
Sbjct: 11 DWQNPEVFAINKEPARSSFYGFSDDPQGYVDSPFMSQDYLSLNGEW 56
>UniRef50_A5FCG4 Cluster: Beta-galactosidase precursor; n=1;
Flavobacterium johnsoniae UW101|Rep: Beta-galactosidase
precursor - Flavobacterium johnsoniae UW101
Length = 1108
Score = 37.1 bits (82), Expect = 1.3
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 536 WENPGVTQLNRLAAHPPFASWRNSEEA-RTDRPSQQLRSLNGEWQI-VSVNI 685
WE+P +T +NR + S+ + E+A + DR +++ LNG+W +VN+
Sbjct: 57 WEDPTITSINRQPSRATAYSYSSVEDALKGDRTKSRIQMLNGDWDFKYAVNL 108
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 1.3
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 456 RGGARYPIRPIVSRIT 503
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_A7CVC4 Cluster: Beta-galactosidase; n=1; Opitutaceae
bacterium TAV2|Rep: Beta-galactosidase - Opitutaceae
bacterium TAV2
Length = 1130
Score = 36.7 bits (81), Expect = 1.7
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 536 WENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR--SLNGEWQ 667
WE P +T LN+L F + + +EAR + + R SLNG WQ
Sbjct: 10 WEAPELTSLNKLPPRATFHGFGSVKEARAGKSEKSTRHHSLNGTWQ 55
>UniRef50_Q8A2G5 Cluster: Beta-galactosidase; n=8;
Bacteroidales|Rep: Beta-galactosidase - Bacteroides
thetaiotaomicron
Length = 1036
Score = 36.3 bits (80), Expect = 2.2
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 533 DWENPGVTQLNRLAAHPPFASWRNSEEAR--TDRPSQQLRSLNGEWQ 667
+W++P V +NR A H + ++ +++EA+ + SQ +LNG W+
Sbjct: 26 EWKDPEVNSVNRSAMHTNYFAYASADEAKAGSKEDSQNFMTLNGLWK 72
>UniRef50_A3XMD4 Cluster: Beta-galactosidase; n=1; Leeuwenhoekiella
blandensis MED217|Rep: Beta-galactosidase -
Leeuwenhoekiella blandensis MED217
Length = 1033
Score = 35.9 bits (79), Expect = 2.9
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 524 QRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ--LRSLNGEWQ 667
Q+ +WENP + N+ F + +++A+T SQ +SLNG W+
Sbjct: 20 QQNEWENPKIIDRNKEEGRASFVLFEKTQKAKTRDASQSQFYKSLNGVWK 69
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 2.9
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 518 VLQRRDWENPGVTQLNRLAAHPP 586
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_Q2VT50 Cluster: Beta-galactosidase precursor; n=2;
Flavobacterium|Rep: Beta-galactosidase precursor -
Flavobacterium sp. 4214
Length = 1046
Score = 35.5 bits (78), Expect = 3.9
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 527 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTD--RPSQQLRSLNGEWQ 667
R DWENP V Q+NR A F + + A D S SL+G+W+
Sbjct: 28 RNDWENPEVFQINREPARAAFLPFADEASAIADDYTRSPWYMSLDGKWK 76
>UniRef50_UPI0000DC0B84 Cluster: UPI0000DC0B84 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B84 UniRef100 entry -
Rattus norvegicus
Length = 300
Score = 35.1 bits (77), Expect = 5.1
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 296 TMTRIHISVSLPLKI-SHLHAHIETLARTHR*LTRSSPRSLQAVAACRETSTHARRSTLP 120
T T +HI L +H HAH TL TH T ++ +LQ CR T THA +
Sbjct: 213 THTDLHIHTHTYLHAHTHTHAHTHTLMHTHS-STHANAHTLQ----CRHTHTHAHSHSQT 267
Query: 119 H 117
H
Sbjct: 268 H 268
>UniRef50_A4RLN6 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1047
Score = 34.7 bits (76), Expect = 6.8
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 533 DWENPGVTQLNRLAAHPPFASWRNSEEART-DRPSQQLRSLNGEWQ 667
DW N V N L A F S+ + A T DR + SLNG W+
Sbjct: 9 DWSNLAVLHTNALPARAHFYSYASETAALTHDRHQSEYHSLNGTWK 54
>UniRef50_O52847 Cluster: Beta-galactosidase; n=3; Bacillus
megaterium|Rep: Beta-galactosidase - Bacillus megaterium
Length = 1034
Score = 34.7 bits (76), Expect = 6.8
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 533 DWEN-PGVTQLNRLAAHPPFASWRNSEEA-RTDRPSQ-QLRSLNGEW 664
+W N P + QLNR AH ++ EEA + DR S +SLNG W
Sbjct: 19 EWNNNPEIFQLNRSKAHALLMPYQTVEEALKNDRKSSVYYQSLNGSW 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,124,587,786
Number of Sequences: 1657284
Number of extensions: 19592749
Number of successful extensions: 45754
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 42575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45619
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 170183938450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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