Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_B02_e586_04.seq
         (1524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.82 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   2.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   3.3  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    25   7.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   7.6  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    25   7.6  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    25   7.6  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 0.82
 Identities = 20/80 (25%), Positives = 21/80 (26%)
 Frame = -1

Query: 1479 GGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXT 1300
            G   P     P     P P G  P             P    P   PG +P      G  
Sbjct: 196  GNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQ 255

Query: 1299 GXPXEGXXXPXPPNXPXGXP 1240
              P  G   P  P  P G P
Sbjct: 256  RPPMMGQPPPIRPPNPMGGP 275


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 12/42 (28%), Positives = 13/42 (30%)
 Frame = +2

Query: 1307 PPXXXXRGRAPGPGXGXXXPGXXXGXXREXAXLRGPXPGGXG 1432
            P      G  PGP       G   G     +    P PGG G
Sbjct: 1385 PKKHRRNGSCPGPSNESTDGGESMGTASTSSQTDEPRPGGSG 1426


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 27/108 (25%), Positives = 33/108 (30%), Gaps = 5/108 (4%)
 Frame = +2

Query: 1163 PPGXAXGXXGPXXRXXPXVFQXQCAXGXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPG 1342
            PPG + G   P  +      Q Q   G P    GG GS           P    R  + G
Sbjct: 115  PPGASPGLVPPPQQQQ----QQQAPLGIPSVAHGG-GSGAIHASPNAQNPSSGGRSSSGG 169

Query: 1343 PGXGXXXPGXXXGXXR-----EXAXLRGPXPGGXGAXXFXGXXXGXGG 1471
             G G    G            + A ++   PG  G     G   G GG
Sbjct: 170  GGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGG 217


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 168 YNWSMKTLRCVLLRSMTSNSARAHQ 94
           Y W M  L  V+L+S   +  +AHQ
Sbjct: 207 YPWEMMPLMYVILKSADGDVQKAHQ 231


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 168 YNWSMKTLRCVLLRSMTSNSARAHQ 94
           Y W M  L  V+L+S   +  +AHQ
Sbjct: 207 YPWEMMPLMYVILKSADGDVQKAHQ 231


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 168 YNWSMKTLRCVLLRSMTSNSARAHQ 94
           Y W M  L  V+L+S   +  +AHQ
Sbjct: 183 YPWEMMPLMYVILKSADGDVQKAHQ 207


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 168 YNWSMKTLRCVLLRSMTSNSARAHQ 94
           Y W M  L  V+L+S   +  +AHQ
Sbjct: 183 YPWEMMPLMYVILKSADGDVQKAHQ 207


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,168,002
Number of Sequences: 2352
Number of extensions: 21609
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 178813800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)