Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_B02_e586_04.seq
(1524 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein. 36 0.30
BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein. 36 0.30
AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein. 36 0.30
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 35 0.90
X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for ... 35 0.90
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 34 1.6
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 33 2.1
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 33 2.1
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 33 2.1
BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alph... 33 2.1
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 33 2.1
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 33 2.1
AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha... 33 2.1
AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collage... 33 2.1
M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 33 2.8
M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 33 2.8
AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated trans... 33 2.8
Z15025-1|CAA78744.1| 1870|Homo sapiens Bat2 protein. 33 3.6
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 33 3.6
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 33 3.6
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 33 3.6
BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transc... 33 3.6
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 33 3.6
BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transc... 33 3.6
BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein. 33 3.6
BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein. 33 3.6
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 33 3.6
AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transc... 33 3.6
AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated trans... 33 3.6
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 33 3.6
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 33 3.6
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 33 3.6
AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein... 33 3.6
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 32 4.8
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 32 6.4
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 32 6.4
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 32 6.4
S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1... 32 6.4
L40027-1|AAA62432.1| 483|Homo sapiens glycogen synthase kinase ... 32 6.4
J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein. 32 6.4
D63424-1|BAA23608.1| 483|Homo sapiens glycogen synthase kinase ... 32 6.4
CR542139-1|CAG46936.1| 284|Homo sapiens PEF protein. 32 6.4
BC051865-1|AAH51865.1| 483|Homo sapiens glycogen synthase kinas... 32 6.4
BC027984-1|AAH27984.1| 483|Homo sapiens glycogen synthase kinas... 32 6.4
BC012561-1|AAH12561.1| 284|Homo sapiens penta-EF-hand domain co... 32 6.4
BC002773-1|AAH02773.1| 284|Homo sapiens penta-EF-hand domain co... 32 6.4
AY359011-1|AAQ89370.1| 284|Homo sapiens PEF protein. 32 6.4
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 32 6.4
AK001420-1|BAA91680.1| 284|Homo sapiens protein ( Homo sapiens ... 32 6.4
AC006486-1|AAD11986.1| 483|Homo sapiens KG3A_HUMAN protein. 32 6.4
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag... 32 6.4
AB026628-1|BAA85163.1| 284|Homo sapiens peflin protein. 32 6.4
AB018357-1|BAA84922.1| 284|Homo sapiens ABP32 protein. 32 6.4
>X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein.
Length = 2135
Score = 36.3 bits (80), Expect = 0.30
Identities = 28/84 (33%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Frame = -1
Query: 1482 RGGXPPXPXXXPXNXXAPXP------PGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLS 1321
RGG P P P P P PG P S P P P GP A S
Sbjct: 687 RGGPSPSPPTAPKALATPAPDTLPVEPG-APSTATASDISPGASPSLLSPW-GPWAGSGS 744
Query: 1320 XXXGGXTGXP-XEGXXXPXPPNXP 1252
G TG P E P P N P
Sbjct: 745 ISSPGSTGSPLHEEPSPPSPQNGP 768
>BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein.
Length = 2135
Score = 36.3 bits (80), Expect = 0.30
Identities = 28/84 (33%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Frame = -1
Query: 1482 RGGXPPXPXXXPXNXXAPXP------PGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLS 1321
RGG P P P P P PG P S P P P GP A S
Sbjct: 687 RGGPSPSPPTAPKALATPAPDTLPVEPG-APSTATASDISPGASPSLLSPW-GPWAGSGS 744
Query: 1320 XXXGGXTGXP-XEGXXXPXPPNXP 1252
G TG P E P P N P
Sbjct: 745 ISSPGSTGSPLHEEPSPPSPQNGP 768
>AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein.
Length = 2143
Score = 36.3 bits (80), Expect = 0.30
Identities = 28/84 (33%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Frame = -1
Query: 1482 RGGXPPXPXXXPXNXXAPXP------PGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLS 1321
RGG P P P P P PG P S P P P GP A S
Sbjct: 695 RGGPSPSPPTAPKALATPAPDTLPVEPG-APSTATASDISPGASPSLLSPW-GPWAGSGS 752
Query: 1320 XXXGGXTGXP-XEGXXXPXPPNXP 1252
G TG P E P P N P
Sbjct: 753 ISSPGSTGSPLHEEPSPPSPQNGP 776
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 34.7 bits (76), Expect = 0.90
Identities = 30/93 (32%), Positives = 33/93 (35%), Gaps = 4/93 (4%)
Frame = -1
Query: 1506 GXPXXAGXRGGX-PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGAR 1330
G P G RG PP P + P PPG G + P PG P G R
Sbjct: 654 GPPGLRGERGEQGPPGPTGFQGHPGPPGPPGEG--GKPGDQGVP-GGPGAVGPLGPRGER 710
Query: 1329 --PLSXXXGGXTGXPXE-GXXXPXPPNXPXGXP 1240
P G TG P E G P+ P G P
Sbjct: 711 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGSP 743
>X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for
pro-alpha 2 (V) collagen chain. ).
Length = 1099
Score = 34.7 bits (76), Expect = 0.90
Identities = 30/93 (32%), Positives = 33/93 (35%), Gaps = 4/93 (4%)
Frame = -1
Query: 1506 GXPXXAGXRGGX-PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGAR 1330
G P G RG PP P + P PPG G + P PG P G R
Sbjct: 257 GPPGLRGERGEQGPPGPTGFQGHPGPPGPPGEG--GKPGDQGVP-GGPGAVGPLGPRGER 313
Query: 1329 --PLSXXXGGXTGXPXE-GXXXPXPPNXPXGXP 1240
P G TG P E G P+ P G P
Sbjct: 314 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGSP 346
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 33.9 bits (74), Expect = 1.6
Identities = 29/101 (28%), Positives = 30/101 (29%), Gaps = 8/101 (7%)
Frame = +2
Query: 1241 GXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPGXGXXXPG--------XXXGXXREX 1396
G P G G G P+ G P P GRA G G PG G
Sbjct: 65 GSPAGA-AGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPA 123
Query: 1397 AXLRGPXPGGXGAXXFXGXXXGXGGXPPRXPAXXGXPXXXA 1519
A LR P G GA P PA P A
Sbjct: 124 AKLRPPPEGSAGACAPVPAAAAVAAGPEPAPAGPAKPAGPA 164
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing factor
protein.
Length = 707
Score = 33.5 bits (73), Expect = 2.1
Identities = 35/118 (29%), Positives = 36/118 (30%), Gaps = 1/118 (0%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXP-PGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGX 1294
PP P P P PG G A S P P PG G P T
Sbjct: 102 PPQDSSKPVVAQGPGPAPGVGSAPPASS-SAPPATPPTSGAPPGSGPGPTPTPPPAVTSA 160
Query: 1293 PXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQGXP 1120
P G P PP+ G P T P P A PG G P G G P
Sbjct: 161 P-PGAPPPTPPS--SGVP-------TTPPQAGGPPPPPAAVPGPG-PGPKQGPGPGGP 207
Score = 32.3 bits (70), Expect = 4.8
Identities = 27/90 (30%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP-- 1327
P +G G P P P PPG P S P P P P P A P
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAPPGAPP-PTPPSSGVPTTPPQAGGPPPPPAAVPGP 194
Query: 1326 -LSXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
G G P +G P P P G P
Sbjct: 195 GPGPKQGPGPGGP-KGGKMPGGPK-PGGGP 222
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 33.5 bits (73), Expect = 2.1
Identities = 35/118 (29%), Positives = 36/118 (30%), Gaps = 1/118 (0%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXP-PGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGX 1294
PP P P P PG G A S P P PG G P T
Sbjct: 102 PPQDSSKPVVAQGPGPAPGVGSTPPASS-SAPPATPPTSGAPPGSGPGPTPTPPPAVTSA 160
Query: 1293 PXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQGXP 1120
P G P PP+ G P T P P A PG G P G G P
Sbjct: 161 P-PGAPPPTPPS--SGVP-------TTPPQAGGPPPPPAAVPGPG-PGPKQGPGPGGP 207
Score = 32.3 bits (70), Expect = 4.8
Identities = 27/90 (30%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP-- 1327
P +G G P P P PPG P S P P P P P A P
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAPPGAPP-PTPPSSGVPTTPPQAGGPPPPPAAVPGP 194
Query: 1326 -LSXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
G G P +G P P P G P
Sbjct: 195 GPGPKQGPGPGGP-KGGKMPGGPK-PGGGP 222
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 33.5 bits (73), Expect = 2.1
Identities = 35/118 (29%), Positives = 36/118 (30%), Gaps = 1/118 (0%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXP-PGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGX 1294
PP P P P PG G A S P P PG G P T
Sbjct: 102 PPQDSSKPVVAQGPGPAPGVGSAPPASS-SAPPATPPTSGAPPGSGPGPTPTPPPAVTSA 160
Query: 1293 PXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQGXP 1120
P G P PP+ G P T P P A PG G P G G P
Sbjct: 161 P-PGAPPPTPPS--SGVP-------TTPPQAGGPPPPPAAVPGPG-PGPKQGPGPGGP 207
Score = 32.3 bits (70), Expect = 4.8
Identities = 27/90 (30%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP-- 1327
P +G G P P P PPG P S P P P P P A P
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAPPGAPP-PTPPSSGVPTTPPQAGGPPPPPAAVPGP 194
Query: 1326 -LSXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
G G P +G P P P G P
Sbjct: 195 GPGPKQGPGPGGP-KGGKMPGGPK-PGGGP 222
>BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alpha 3
protein.
Length = 684
Score = 33.5 bits (73), Expect = 2.1
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 1/105 (0%)
Frame = -1
Query: 1431 PXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP-XEGXXXPXPPNX 1255
P PPG P PG P PG +P G G P +G P
Sbjct: 37 PGPPGKPGQDGIDGEAGPPGLPGPPGPKGAPG-KPGKPGEAGLPGLPGVDGLTGRDGPPG 95
Query: 1254 PXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQGXP 1120
P G P G GP P G G+P P G P
Sbjct: 96 PKGAP---------GERGSLGPPGPPGLGGKGLPGPPGEAGVSGP 131
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 33.5 bits (73), Expect = 2.1
Identities = 35/118 (29%), Positives = 36/118 (30%), Gaps = 1/118 (0%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXP-PGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGX 1294
PP P P P PG G A S P P PG G P T
Sbjct: 29 PPQDSSKPVVAQGPGPAPGVGSAPPASS-SAPPATPPTSGAPPGSGPGPTPTPPPAVTSA 87
Query: 1293 PXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQGXP 1120
P G P PP+ G P T P P A PG G P G G P
Sbjct: 88 P-PGAPPPTPPS--SGVP-------TTPPQAGGPPPPPAAVPGPG-PGPKQGPGPGGP 134
Score = 32.3 bits (70), Expect = 4.8
Identities = 27/90 (30%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP-- 1327
P +G G P P P PPG P S P P P P P A P
Sbjct: 63 PPTSGAPPGSGPGPTPTPPPAVTSAPPGAPP-PTPPSSGVPTTPPQAGGPPPPPAAVPGP 121
Query: 1326 -LSXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
G G P +G P P P G P
Sbjct: 122 GPGPKQGPGPGGP-KGGKMPGGPK-PGGGP 149
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 33.5 bits (73), Expect = 2.1
Identities = 35/118 (29%), Positives = 36/118 (30%), Gaps = 1/118 (0%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXP-PGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGX 1294
PP P P P PG G A S P P PG G P T
Sbjct: 102 PPQDSSKPVVAQGPGPAPGVGSAPPASS-SAPPATPPTSGAPPGSGPGPTPTPPPAVTSA 160
Query: 1293 PXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQGXP 1120
P G P PP+ G P T P P A PG G P G G P
Sbjct: 161 P-PGAPPPTPPS--SGVP-------TTPPQAGGPPPPPAAVPGPG-PGPKQGPGPGGP 207
Score = 32.3 bits (70), Expect = 4.8
Identities = 27/90 (30%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP-- 1327
P +G G P P P PPG P S P P P P P A P
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAPPGAPP-PTPPSSGVPTTPPQAGGPPPPPAAVPGP 194
Query: 1326 -LSXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
G G P +G P P P G P
Sbjct: 195 GPGPKQGPGPGGP-KGGKMPGGPK-PGGGP 222
>AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha 3
protein.
Length = 684
Score = 33.5 bits (73), Expect = 2.1
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 1/105 (0%)
Frame = -1
Query: 1431 PXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP-XEGXXXPXPPNX 1255
P PPG P PG P PG +P G G P +G P
Sbjct: 37 PGPPGKPGQDGIDGEAGPPGLPGPPGPKGAPG-KPGKPGEAGLPGLPGVDGLTGRDGPPG 95
Query: 1254 PXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQGXP 1120
P G P G GP P G G+P P G P
Sbjct: 96 PKGAP---------GERGSLGPPGPPGLGGKGLPGPPGEAGVSGP 131
>AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 33.5 bits (73), Expect = 2.1
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 1/105 (0%)
Frame = -1
Query: 1431 PXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP-XEGXXXPXPPNX 1255
P PPG P PG P PG +P G G P +G P
Sbjct: 37 PGPPGKPGQDGIDGEAGPPGLPGPPGPKGAPG-KPGKPGEAGLPGLPGVDGLTGRDGPPG 95
Query: 1254 PXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQGXP 1120
P G P G GP P G G+P P G P
Sbjct: 96 PKGAP---------GERGSLGPPGPPGLGGKGLPGPPGEAGVSGP 131
>M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) gene, 3' end. ).
Length = 2142
Score = 33.1 bits (72), Expect = 2.8
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 496 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAP 555
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 556 TLVSGGGSTSSTSSGSFEASPVEPQLP 582
>M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) mRNA, complete cds.
).
Length = 2142
Score = 33.1 bits (72), Expect = 2.8
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 496 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAP 555
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 556 TLVSGGGSTSSTSSGSFEASPVEPQLP 582
>AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 33.1 bits (72), Expect = 2.8
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 508 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAP 567
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 568 TLVSGGGSTSSTSSGSFEASPVEPQLP 594
>Z15025-1|CAA78744.1| 1870|Homo sapiens Bat2 protein.
Length = 1870
Score = 32.7 bits (71), Expect = 3.6
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 507 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAP 566
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 567 TLVSGGGSTSSTSSGSFEASPVEPQLP 593
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 32.7 bits (71), Expect = 3.6
Identities = 34/133 (25%), Positives = 36/133 (27%), Gaps = 4/133 (3%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPG--A 1333
G P G G P P P P G + P PG P GPG
Sbjct: 243 GSPGENGSPG--PMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPG 300
Query: 1332 RPLSXXXGGXTGXPX-EGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GG 1159
P + G TG EG P G P G G PG G
Sbjct: 301 APGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAG 360
Query: 1158 VPXXPTXXGQGXP 1120
P P G P
Sbjct: 361 APGFPGPRGPPGP 373
>X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for
alpha-1 type II collagen. ).
Length = 1418
Score = 32.7 bits (71), Expect = 3.6
Identities = 34/133 (25%), Positives = 36/133 (27%), Gaps = 4/133 (3%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPG--A 1333
G P G G P P P P G + P PG P GPG
Sbjct: 243 GSPGENGSPG--PMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPG 300
Query: 1332 RPLSXXXGGXTGXPX-EGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GG 1159
P + G TG EG P G P G G PG G
Sbjct: 301 APGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAG 360
Query: 1158 VPXXPTXXGQGXP 1120
P P G P
Sbjct: 361 APGFPGPRGPPDP 373
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 32.7 bits (71), Expect = 3.6
Identities = 34/133 (25%), Positives = 36/133 (27%), Gaps = 4/133 (3%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPG--A 1333
G P G G P P P P G + P PG P GPG
Sbjct: 312 GSPGENGSPG--PMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPG 369
Query: 1332 RPLSXXXGGXTGXPX-EGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GG 1159
P + G TG EG P G P G G PG G
Sbjct: 370 APGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAG 429
Query: 1158 VPXXPTXXGQGXP 1120
P P G P
Sbjct: 430 APGFPGPRGPPGP 442
>BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 32.7 bits (71), Expect = 3.6
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 508 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAP 567
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 568 TLVSGGGSTSSTSSGSFEASPVEPQLP 594
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 32.7 bits (71), Expect = 3.6
Identities = 34/133 (25%), Positives = 36/133 (27%), Gaps = 4/133 (3%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPG--A 1333
G P G G P P P P G + P PG P GPG
Sbjct: 312 GSPGENGSPG--PMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPG 369
Query: 1332 RPLSXXXGGXTGXPX-EGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GG 1159
P + G TG EG P G P G G PG G
Sbjct: 370 APGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAG 429
Query: 1158 VPXXPTXXGQGXP 1120
P P G P
Sbjct: 430 APGFPGPRGPPGP 442
>BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 32.7 bits (71), Expect = 3.6
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 508 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAP 567
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 568 TLVSGGGSTSSTSSGSFEASPVEPQLP 594
>BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein.
Length = 2157
Score = 32.7 bits (71), Expect = 3.6
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 508 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAP 567
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 568 TLVSGGGSTSSTSSGSFEASPVEPQLP 594
>BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 32.7 bits (71), Expect = 3.6
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 508 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAP 567
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 568 TLVSGGGSTSSTSSGSFEASPVEPQLP 594
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.7 bits (71), Expect = 3.6
Identities = 28/101 (27%), Positives = 30/101 (29%), Gaps = 8/101 (7%)
Frame = +2
Query: 1241 GXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPGXGXXXPG--------XXXGXXREX 1396
G P G G G P+ G P P GRA G G PG G
Sbjct: 65 GSPAGA-AGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPA 123
Query: 1397 AXLRGPXPGGXGAXXFXGXXXGXGGXPPRXPAXXGXPXXXA 1519
A LR P G G+ P PA P A
Sbjct: 124 AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPA 164
>AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 32.7 bits (71), Expect = 3.6
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 508 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAP 567
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 568 TLVSGGGSTSSTSSGSFEASPVEPQLP 594
>AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 32.7 bits (71), Expect = 3.6
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 508 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAP 567
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 568 TLVSGGGSTSSTSSGSFEASPVEPQLP 594
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.7 bits (71), Expect = 3.6
Identities = 28/101 (27%), Positives = 30/101 (29%), Gaps = 8/101 (7%)
Frame = +2
Query: 1241 GXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPGXGXXXPG--------XXXGXXREX 1396
G P G G G P+ G P P GRA G G PG G
Sbjct: 65 GSPAGA-AGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPA 123
Query: 1397 AXLRGPXPGGXGAXXFXGXXXGXGGXPPRXPAXXGXPXXXA 1519
A LR P G G+ P PA P A
Sbjct: 124 AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPA 164
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.7 bits (71), Expect = 3.6
Identities = 28/101 (27%), Positives = 30/101 (29%), Gaps = 8/101 (7%)
Frame = +2
Query: 1241 GXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPGXGXXXPG--------XXXGXXREX 1396
G P G G G P+ G P P GRA G G PG G
Sbjct: 65 GSPAGA-AGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPA 123
Query: 1397 AXLRGPXPGGXGAXXFXGXXXGXGGXPPRXPAXXGXPXXXA 1519
A LR P G G+ P PA P A
Sbjct: 124 AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPA 164
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 32.7 bits (71), Expect = 3.6
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 508 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAP 567
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 568 TLVSGGGSTSSTSSGSFEASPVEPQLP 594
>AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein
protein.
Length = 1537
Score = 32.7 bits (71), Expect = 3.6
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 4/87 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPX--PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
P P P P AP PP P P P PG A P
Sbjct: 512 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAP 571
Query: 1326 LSXXXGGXTGXPXEGX--XXPXPPNXP 1252
GG T G P P P
Sbjct: 572 TLVSGGGSTSSTSSGSFEASPVEPQLP 598
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens cDNA
FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 32.3 bits (70), Expect = 4.8
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = -1
Query: 1467 PXPXXXPXNXXAPXPPGXGPLXXAXSRXXPX-XXPGXXXPXPGPGAR 1330
P P P + P PG P P PG P P PG R
Sbjct: 37 PVPAAAPASSSDPAAPGQTPASAQAPAQTPAPALPGPALPGPFPGGR 83
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 31.9 bits (69), Expect = 6.4
Identities = 30/109 (27%), Positives = 32/109 (29%), Gaps = 4/109 (3%)
Frame = -1
Query: 1431 PXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXG--GXTGXPX-EGXXXPXPP 1261
P PPG A P G P PG + L G G G P G P
Sbjct: 814 PGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGP 873
Query: 1260 NXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVPXXPTXXGQGXPL 1117
G P T G G P PG G P G G P+
Sbjct: 874 AGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPI 922
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 31.9 bits (69), Expect = 6.4
Identities = 30/109 (27%), Positives = 32/109 (29%), Gaps = 4/109 (3%)
Frame = -1
Query: 1431 PXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXG--GXTGXPX-EGXXXPXPP 1261
P PPG A P G P PG + L G G G P G P
Sbjct: 835 PGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGP 894
Query: 1260 NXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVPXXPTXXGQGXPL 1117
G P T G G P PG G P G G P+
Sbjct: 895 AGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPI 943
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 31.9 bits (69), Expect = 6.4
Identities = 30/109 (27%), Positives = 32/109 (29%), Gaps = 4/109 (3%)
Frame = -1
Query: 1431 PXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXG--GXTGXPX-EGXXXPXPP 1261
P PPG A P G P PG + L G G G P G P
Sbjct: 921 PGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGP 980
Query: 1260 NXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVPXXPTXXGQGXPL 1117
G P T G G P PG G P G G P+
Sbjct: 981 AGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPI 1029
>S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1
chain protein.
Length = 1186
Score = 31.9 bits (69), Expect = 6.4
Identities = 23/80 (28%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXG--GXTG 1297
PP P P +P PPG + P PG P PG + + G G G
Sbjct: 745 PPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDG 804
Query: 1296 XP-XEGXXXPXPPNXPXGXP 1240
P G P P G P
Sbjct: 805 KPGLRGDPGPAGPPGLMGPP 824
>L40027-1|AAA62432.1| 483|Homo sapiens glycogen synthase kinase 3
protein.
Length = 483
Score = 31.9 bits (69), Expect = 6.4
Identities = 23/77 (29%), Positives = 24/77 (31%)
Frame = +2
Query: 1241 GXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPGXGXXXPGXXXGXXREXAXLRGPXP 1420
G P G GG G + P G GPG PG G G
Sbjct: 4 GGPSG--GGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASV----GAMG 57
Query: 1421 GGXGAXXFXGXXXGXGG 1471
GG GA G G GG
Sbjct: 58 GGVGASSSGGGPGGSGG 74
>J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein.
Length = 961
Score = 31.9 bits (69), Expect = 6.4
Identities = 30/109 (27%), Positives = 32/109 (29%), Gaps = 4/109 (3%)
Frame = -1
Query: 1431 PXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXG--GXTGXPX-EGXXXPXPP 1261
P PPG A P G P PG + L G G G P G P
Sbjct: 192 PGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGP 251
Query: 1260 NXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVPXXPTXXGQGXPL 1117
G P T G G P PG G P G G P+
Sbjct: 252 AGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPI 300
>D63424-1|BAA23608.1| 483|Homo sapiens glycogen synthase kinase
3alpha protein.
Length = 483
Score = 31.9 bits (69), Expect = 6.4
Identities = 23/77 (29%), Positives = 24/77 (31%)
Frame = +2
Query: 1241 GXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPGXGXXXPGXXXGXXREXAXLRGPXP 1420
G P G GG G + P G GPG PG G G
Sbjct: 4 GGPSG--GGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASV----GAMG 57
Query: 1421 GGXGAXXFXGXXXGXGG 1471
GG GA G G GG
Sbjct: 58 GGVGASSSGGGPGGSGG 74
>CR542139-1|CAG46936.1| 284|Homo sapiens PEF protein.
Length = 284
Score = 31.9 bits (69), Expect = 6.4
Identities = 27/85 (31%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +2
Query: 1229 QCAXGXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPG-XGXXXPGXXXGXXREXAXL 1405
Q G P G GG G P+ G P PP P PG PG G
Sbjct: 35 QYGSGLPPG--GGYGG--PAPGGPYGPPAGGGPYGHPNPGMFPSGTPGGPYGGAAPGGPY 90
Query: 1406 RGPXPGGXGAXXFXGXXXGXGGXPP 1480
P P GA G GG PP
Sbjct: 91 GQPPPSSYGAQ--QPGLYGQGGAPP 113
>BC051865-1|AAH51865.1| 483|Homo sapiens glycogen synthase kinase 3
alpha protein.
Length = 483
Score = 31.9 bits (69), Expect = 6.4
Identities = 23/77 (29%), Positives = 24/77 (31%)
Frame = +2
Query: 1241 GXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPGXGXXXPGXXXGXXREXAXLRGPXP 1420
G P G GG G + P G GPG PG G G
Sbjct: 4 GGPSG--GGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASV----GAMG 57
Query: 1421 GGXGAXXFXGXXXGXGG 1471
GG GA G G GG
Sbjct: 58 GGVGASSSGGGPGGSGG 74
>BC027984-1|AAH27984.1| 483|Homo sapiens glycogen synthase kinase 3
alpha protein.
Length = 483
Score = 31.9 bits (69), Expect = 6.4
Identities = 23/77 (29%), Positives = 24/77 (31%)
Frame = +2
Query: 1241 GXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPGXGXXXPGXXXGXXREXAXLRGPXP 1420
G P G GG G + P G GPG PG G G
Sbjct: 4 GGPSG--GGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASV----GAMG 57
Query: 1421 GGXGAXXFXGXXXGXGG 1471
GG GA G G GG
Sbjct: 58 GGVGASSSGGGPGGSGG 74
>BC012561-1|AAH12561.1| 284|Homo sapiens penta-EF-hand domain
containing 1 protein.
Length = 284
Score = 31.9 bits (69), Expect = 6.4
Identities = 27/85 (31%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +2
Query: 1229 QCAXGXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPG-XGXXXPGXXXGXXREXAXL 1405
Q G P G GG G P+ G P PP P PG PG G
Sbjct: 35 QYGSGLPPG--GGYGG--PAPGGPYGPPAGGGPYGHPNPGMFPSGTPGGPYGGAAPGGPY 90
Query: 1406 RGPXPGGXGAXXFXGXXXGXGGXPP 1480
P P GA G GG PP
Sbjct: 91 GQPPPSSYGAQ--QPGLYGQGGAPP 113
>BC002773-1|AAH02773.1| 284|Homo sapiens penta-EF-hand domain
containing 1 protein.
Length = 284
Score = 31.9 bits (69), Expect = 6.4
Identities = 27/85 (31%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +2
Query: 1229 QCAXGXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPG-XGXXXPGXXXGXXREXAXL 1405
Q G P G GG G P+ G P PP P PG PG G
Sbjct: 35 QYGSGLPPG--GGYGG--PAPGGPYGPPAGGGPYGHPNPGMFPSGTPGGPYGGAAPGGPY 90
Query: 1406 RGPXPGGXGAXXFXGXXXGXGGXPP 1480
P P GA G GG PP
Sbjct: 91 GQPPPSSYGAQ--QPGLYGQGGAPP 113
>AY359011-1|AAQ89370.1| 284|Homo sapiens PEF protein.
Length = 284
Score = 31.9 bits (69), Expect = 6.4
Identities = 27/85 (31%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +2
Query: 1229 QCAXGXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPG-XGXXXPGXXXGXXREXAXL 1405
Q G P G GG G P+ G P PP P PG PG G
Sbjct: 35 QYGSGLPPG--GGYGG--PAPGGPYGPPAGGGPYGHPNPGMFPSGTPGGPYGGAAPGGPY 90
Query: 1406 RGPXPGGXGAXXFXGXXXGXGGXPP 1480
P P GA G GG PP
Sbjct: 91 GQPPPSSYGAQ--QPGLYGQGGAPP 113
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 31.9 bits (69), Expect = 6.4
Identities = 30/109 (27%), Positives = 32/109 (29%), Gaps = 4/109 (3%)
Frame = -1
Query: 1431 PXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXG--GXTGXPX-EGXXXPXPP 1261
P PPG A P G P PG + L G G G P G P
Sbjct: 835 PGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGP 894
Query: 1260 NXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVPXXPTXXGQGXPL 1117
G P T G G P PG G P G G P+
Sbjct: 895 AGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPI 943
>AK001420-1|BAA91680.1| 284|Homo sapiens protein ( Homo sapiens cDNA
FLJ10558 fis, clone NT2RP2002595, weakly similar to
PROBABLE CALCIUM-BINDING PROTEIN ALG-2. ).
Length = 284
Score = 31.9 bits (69), Expect = 6.4
Identities = 27/85 (31%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +2
Query: 1229 QCAXGXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPG-XGXXXPGXXXGXXREXAXL 1405
Q G P G GG G P+ G P PP P PG PG G
Sbjct: 35 QYGSGLPPG--GGYGG--PAPGGPYGPPAGGGPYGHPNPGMFPSGTPGGPYGGAAPGGPY 90
Query: 1406 RGPXPGGXGAXXFXGXXXGXGGXPP 1480
P P GA G GG PP
Sbjct: 91 GQPPPSSYGAQ--QPGLYGQGGAPP 113
>AC006486-1|AAD11986.1| 483|Homo sapiens KG3A_HUMAN protein.
Length = 483
Score = 31.9 bits (69), Expect = 6.4
Identities = 23/77 (29%), Positives = 24/77 (31%)
Frame = +2
Query: 1241 GXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPGXGXXXPGXXXGXXREXAXLRGPXP 1420
G P G GG G + P G GPG PG G G
Sbjct: 4 GGPSG--GGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASV----GAMG 57
Query: 1421 GGXGAXXFXGXXXGXGG 1471
GG GA G G GG
Sbjct: 58 GGVGASSSGGGPGGSGG 74
>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
precursor variant protein.
Length = 1463
Score = 31.9 bits (69), Expect = 6.4
Identities = 23/80 (28%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXG--GXTG 1297
PP P P +P PPG + P PG P PG + + G G G
Sbjct: 1022 PPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDG 1081
Query: 1296 XP-XEGXXXPXPPNXPXGXP 1240
P G P P G P
Sbjct: 1082 KPGLRGDPGPAGPPGLMGPP 1101
>AB026628-1|BAA85163.1| 284|Homo sapiens peflin protein.
Length = 284
Score = 31.9 bits (69), Expect = 6.4
Identities = 27/85 (31%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +2
Query: 1229 QCAXGXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPG-XGXXXPGXXXGXXREXAXL 1405
Q G P G GG G P+ G P PP P PG PG G
Sbjct: 35 QYGSGLPPG--GGYGG--PAPGGPYGPPAGGGPYGHPNPGMFPSGTPGGPYGGAAPGGPY 90
Query: 1406 RGPXPGGXGAXXFXGXXXGXGGXPP 1480
P P GA G GG PP
Sbjct: 91 GQPPPSSYGAQ--QPGLYGQGGAPP 113
>AB018357-1|BAA84922.1| 284|Homo sapiens ABP32 protein.
Length = 284
Score = 31.9 bits (69), Expect = 6.4
Identities = 27/85 (31%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +2
Query: 1229 QCAXGXPXGXLGGXGSXXPSXGXPVXPPXXXXRGRAPGPG-XGXXXPGXXXGXXREXAXL 1405
Q G P G GG G P+ G P PP P PG PG G
Sbjct: 35 QYGSGLPPG--GGYGG--PAPGGPYGPPAGGGPYGHPNPGMFPSGTPGGPYGGAAPGGPY 90
Query: 1406 RGPXPGGXGAXXFXGXXXGXGGXPP 1480
P P GA G GG PP
Sbjct: 91 GQPPPSSYGAQ--QPGLYGQGGAPP 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,060,606
Number of Sequences: 237096
Number of extensions: 3906509
Number of successful extensions: 17121
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 14110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16789
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22690981476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -