Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_B02_e586_04.seq
(1524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 41 0.003
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 41 0.003
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 41 0.003
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 41 0.003
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 41 0.003
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 40 0.005
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 39 0.011
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 36 0.057
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 36 0.057
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 36 0.057
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 36 0.057
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 36 0.057
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 36 0.057
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 36 0.100
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 36 0.100
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 35 0.17
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 33 0.40
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 33 0.53
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.53
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.93
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.93
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.93
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 32 0.93
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 32 0.93
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 32 0.93
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 32 0.93
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 32 0.93
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 32 0.93
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 32 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 1.2
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.6
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.6
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 31 1.6
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 2.1
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 2.1
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 2.1
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 2.8
U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical pr... 31 2.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 2.8
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 30 3.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 3.8
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 3.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 3.8
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 30 3.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 3.8
Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.6
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 29 6.6
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 6.6
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 8.7
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 8.7
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 8.7
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 8.7
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 8.7
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical protein
F57B1.4 protein.
Length = 317
Score = 40.7 bits (91), Expect = 0.003
Identities = 34/120 (28%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
PP P P PG S P PG P PGP +P S G G P
Sbjct: 178 PPGPSGAPGQKGPSGAPGAPGQSGGASLPGP---PGPAGP-PGPSGQPGSNGNAGAPGAP 233
Query: 1290 XEGXXXPXPPN--XPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQ-GXP 1120
+ P P P G P G P P G P P GQ G P
Sbjct: 234 GQVVDVPGTPGPAGPPGPPGPAGAPGQPGQSGSAQPGGPGPQGDAGAPGAPGQPGQAGAP 293
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical protein
F15H10.2 protein.
Length = 316
Score = 40.7 bits (91), Expect = 0.003
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
PP P P PG + P PG P PGP +P S G G P
Sbjct: 177 PPGPSGAPGQKGPSGAPGAPGQSGGAALPGP---PGPAGP-PGPAGQPGSNGNAGAPGAP 232
Query: 1290 XEGXXXPXPPN--XPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQ-GXP 1120
+ P P P G P G P P G P P GQ G P
Sbjct: 233 GQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAP 292
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical protein
F15H10.1 protein.
Length = 316
Score = 40.7 bits (91), Expect = 0.003
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
PP P P PG + P PG P PGP +P S G G P
Sbjct: 177 PPGPSGAPGQKGPSGAPGAPGQSGGAALPGP---PGPAGP-PGPAGQPGSNGNAGAPGAP 232
Query: 1290 XEGXXXPXPPN--XPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQ-GXP 1120
+ P P P G P G P P G P P GQ G P
Sbjct: 233 GQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAP 292
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 40.7 bits (91), Expect = 0.003
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
PP P P PG + P PG P PGP +P S G G P
Sbjct: 177 PPGPSGAPGQKGPSGAPGAPGQSGGAALPGP---PGPAGP-PGPAGQPGSNGNAGAPGAP 232
Query: 1290 XEGXXXPXPPN--XPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQ-GXP 1120
+ P P P G P G P P G P P GQ G P
Sbjct: 233 GQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAP 292
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 40.7 bits (91), Expect = 0.003
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
PP P P PG + P PG P PGP +P S G G P
Sbjct: 177 PPGPSGAPGQKGPSGAPGAPGQSGGAALPGP---PGPAGP-PGPAGQPGSNGNAGAPGAP 232
Query: 1290 XEGXXXPXPPN--XPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQ-GXP 1120
+ P P P G P G P P G P P GQ G P
Sbjct: 233 GQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAP 292
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical protein
F57B1.3 protein.
Length = 313
Score = 39.9 bits (89), Expect = 0.005
Identities = 34/120 (28%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
PP P P PG S P PG P PGP +P S G G P
Sbjct: 174 PPGPSGAPGQKGPSGAPGVPGQTGGASLPGP---PGPAGP-PGPSGQPGSNGNAGAPGAP 229
Query: 1290 XEGXXXPXPPN--XPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQ-GXP 1120
+ P P P G P G P P G P P GQ G P
Sbjct: 230 GQVVDVPGTPGPAGPPGPPGPAGAPGQPGQSGSGQPGGPGPQGDAGAPGAPGQPGQAGAP 289
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical protein
F02D10.1 protein.
Length = 316
Score = 38.7 bits (86), Expect = 0.011
Identities = 32/100 (32%), Positives = 34/100 (34%), Gaps = 1/100 (1%)
Frame = -1
Query: 1506 GXPXXAGXRG-GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGAR 1330
G P G PP P P N P PG GP S PG P PGP A
Sbjct: 189 GSPAGPSGPGPAGPPGPAGPPGNDGQPGQPG-GPGQDGASSAGGEAGPGPAGP-PGP-AG 245
Query: 1329 PLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXG 1210
P G +G G P P P G P + T G
Sbjct: 246 P--AGPDGQSGSGSAGGPGPKGPPGPAGQPGSDGNPGTAG 283
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 36.3 bits (80), Expect = 0.057
Identities = 33/120 (27%), Positives = 35/120 (29%), Gaps = 3/120 (2%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXP-GPGARPLSXXXGGXTGX 1294
PP P P P P P + P G P P GP P + G G
Sbjct: 105 PPGPPG-PDGSAGPAGPAGNPGADGDA-GSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGS 162
Query: 1293 PXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVPXXPTXXGQ-GXP 1120
P P P G P G GP P PG G P GQ G P
Sbjct: 163 PGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGP 222
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 36.3 bits (80), Expect = 0.057
Identities = 33/120 (27%), Positives = 35/120 (29%), Gaps = 3/120 (2%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXP-GPGARPLSXXXGGXTGX 1294
PP P P P P P + P G P P GP P + G G
Sbjct: 105 PPGPPG-PDGSAGPAGPAGNPGADGDA-GSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGS 162
Query: 1293 PXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVPXXPTXXGQ-GXP 1120
P P P G P G GP P PG G P GQ G P
Sbjct: 163 PGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGP 222
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 36.3 bits (80), Expect = 0.057
Identities = 31/92 (33%), Positives = 31/92 (33%), Gaps = 1/92 (1%)
Frame = -1
Query: 1506 GXPXXAGXRG-GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGAR 1330
G P G PP P N AP PG GP S PG P PGP A
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG-GPGEPGASEQGGPGEPGPAGP-PGP-AG 230
Query: 1329 PLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXA 1234
P G G P G P P P G A
Sbjct: 231 P-----AGNDGAPGTGGPGPAGPKGPPGAAGA 257
Score = 29.9 bits (64), Expect = 5.0
Identities = 36/133 (27%), Positives = 38/133 (28%), Gaps = 6/133 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPXPPGXG------PLXXAXSRXXPXXXPGXXXPXPGP 1339
P G G P P P AP PG G P+ + P PG P P
Sbjct: 106 PPGPGGSPGKPGKPGK-PGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
Query: 1338 GARPLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGG 1159
G G G G P P P G A GP P A GG
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGA--------PGAPGGPGEPGASEQGG 216
Query: 1158 VPXXPTXXGQGXP 1120
P P G P
Sbjct: 217 -PGEPGPAGPPGP 228
Score = 29.1 bits (62), Expect = 8.7
Identities = 30/111 (27%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Frame = -1
Query: 1476 GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGA--RPLSXXXGGX 1303
G PP P P P G S P PG P GA P G
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 1302 TGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVP 1153
+ G P P P G T G GP P PG G P
Sbjct: 212 SEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG----PGPAGPKGPPGAAGAP 258
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 36.3 bits (80), Expect = 0.057
Identities = 31/92 (33%), Positives = 31/92 (33%), Gaps = 1/92 (1%)
Frame = -1
Query: 1506 GXPXXAGXRG-GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGAR 1330
G P G PP P N AP PG GP S PG P PGP A
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG-GPGEPGASEQGGPGEPGPAGP-PGP-AG 230
Query: 1329 PLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXA 1234
P G G P G P P P G A
Sbjct: 231 P-----AGNDGAPGTGGPGPAGPKGPPGAAGA 257
Score = 29.9 bits (64), Expect = 5.0
Identities = 36/133 (27%), Positives = 38/133 (28%), Gaps = 6/133 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPXPPGXG------PLXXAXSRXXPXXXPGXXXPXPGP 1339
P G G P P P AP PG G P+ + P PG P P
Sbjct: 106 PPGPGGSPGKPGKPGK-PGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
Query: 1338 GARPLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGG 1159
G G G G P P P G A GP P A GG
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGA--------PGAPGGPGEPGASEQGG 216
Query: 1158 VPXXPTXXGQGXP 1120
P P G P
Sbjct: 217 -PGEPGPAGPPGP 228
Score = 29.1 bits (62), Expect = 8.7
Identities = 30/111 (27%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Frame = -1
Query: 1476 GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGA--RPLSXXXGGX 1303
G PP P P P G S P PG P GA P G
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 1302 TGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVP 1153
+ G P P P G T G GP P PG G P
Sbjct: 212 SEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG----PGPAGPKGPPGAAGAP 258
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 36.3 bits (80), Expect = 0.057
Identities = 31/92 (33%), Positives = 31/92 (33%), Gaps = 1/92 (1%)
Frame = -1
Query: 1506 GXPXXAGXRG-GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGAR 1330
G P G PP P N AP PG GP S PG P PGP A
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG-GPGEPGASEQGGPGEPGPAGP-PGP-AG 230
Query: 1329 PLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXA 1234
P G G P G P P P G A
Sbjct: 231 P-----AGNDGAPGTGGPGPAGPKGPPGAAGA 257
Score = 29.9 bits (64), Expect = 5.0
Identities = 36/133 (27%), Positives = 38/133 (28%), Gaps = 6/133 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPXPPGXG------PLXXAXSRXXPXXXPGXXXPXPGP 1339
P G G P P P AP PG G P+ + P PG P P
Sbjct: 106 PPGPGGSPGKPGKPGK-PGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
Query: 1338 GARPLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGG 1159
G G G G P P P G A GP P A GG
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGA--------PGAPGGPGEPGASEQGG 216
Query: 1158 VPXXPTXXGQGXP 1120
P P G P
Sbjct: 217 -PGEPGPAGPPGP 228
Score = 29.1 bits (62), Expect = 8.7
Identities = 30/111 (27%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Frame = -1
Query: 1476 GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGA--RPLSXXXGGX 1303
G PP P P P G S P PG P GA P G
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 1302 TGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVP 1153
+ G P P P G T G GP P PG G P
Sbjct: 212 SEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG----PGPAGPKGPPGAAGAP 258
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 36.3 bits (80), Expect = 0.057
Identities = 31/92 (33%), Positives = 31/92 (33%), Gaps = 1/92 (1%)
Frame = -1
Query: 1506 GXPXXAGXRG-GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGAR 1330
G P G PP P N AP PG GP S PG P PGP A
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG-GPGEPGASEQGGPGEPGPAGP-PGP-AG 230
Query: 1329 PLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXA 1234
P G G P G P P P G A
Sbjct: 231 P-----AGNDGAPGTGGPGPAGPKGPPGAAGA 257
Score = 29.9 bits (64), Expect = 5.0
Identities = 36/133 (27%), Positives = 38/133 (28%), Gaps = 6/133 (4%)
Frame = -1
Query: 1500 PXXAGXRGGXPPXPXXXPXNXXAPXPPGXG------PLXXAXSRXXPXXXPGXXXPXPGP 1339
P G G P P P AP PG G P+ + P PG P P
Sbjct: 106 PPGPGGSPGKPGKPGK-PGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
Query: 1338 GARPLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGG 1159
G G G G P P P G A GP P A GG
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGA--------PGAPGGPGEPGASEQGG 216
Query: 1158 VPXXPTXXGQGXP 1120
P P G P
Sbjct: 217 -PGEPGPAGPPGP 228
Score = 29.1 bits (62), Expect = 8.7
Identities = 30/111 (27%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Frame = -1
Query: 1476 GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGA--RPLSXXXGGX 1303
G PP P P P G S P PG P GA P G
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 1302 TGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVP 1153
+ G P P P G T G GP P PG G P
Sbjct: 212 SEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG----PGPAGPKGPPGAAGAP 258
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein 73
protein.
Length = 285
Score = 35.5 bits (78), Expect = 0.100
Identities = 37/126 (29%), Positives = 40/126 (31%), Gaps = 9/126 (7%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGX-XXPXP-GPGARPLSXXXGGXTG 1297
PP P N PPG A P PG P P GP + G G
Sbjct: 142 PPGPAGNAGNPGPKGPPGQP---GAPGEQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPG 198
Query: 1296 XPXEGXXXPXPPNXPX--GXPXAHWX*KTXGXXLXXGPX---XPXAXPG-GGVPXXPTXX 1135
P + P PP P G P A G GP P PG G P P
Sbjct: 199 APGQVRTVPAPPGNPGQPGEPGAQGPPGEDGRPGNSGPQGPPGPQGEPGQDGAPGNPGAP 258
Query: 1134 GQ-GXP 1120
G+ G P
Sbjct: 259 GEAGEP 264
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 35.5 bits (78), Expect = 0.100
Identities = 32/119 (26%), Positives = 33/119 (27%), Gaps = 5/119 (4%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
PP P P PG S P PG P PGP +P S G G P
Sbjct: 175 PPGPSGAPGQKGPSGAPGQPGRSGGASLPGP---PGPAGP-PGPSGQPGSNGNAGAPGAP 230
Query: 1290 XE-----GXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXGQ 1129
G P P P G A G P G P P GQ
Sbjct: 231 GHVVDVPGTPGPAGPPGPAGPAGAPGQPGQAGHAQPGQPGPQGDAGAPGAPGQPGSAGQ 289
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein 139
protein.
Length = 310
Score = 34.7 bits (76), Expect = 0.17
Identities = 32/115 (27%), Positives = 34/115 (29%), Gaps = 1/115 (0%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
PP P P + AP PG PG GPG +P G G P
Sbjct: 159 PPGPAGEPGHDGAPGAPGKPGAPGVGGGSGAPGAPGPKGAPGGPG-QPGRDGQPGQAGQP 217
Query: 1290 XEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGG-GVPXXPTXXGQ 1129
P P P G P GP PGG G P P GQ
Sbjct: 218 GSSSSEPGQPG-PNGQPGPR------------GPPGQAGSPGGNGQPGGPGQPGQ 259
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical protein
C09G5.5 protein.
Length = 317
Score = 33.5 bits (73), Expect = 0.40
Identities = 33/120 (27%), Positives = 35/120 (29%), Gaps = 4/120 (3%)
Frame = -1
Query: 1467 PXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPX--PGPGARPLSXXXGGXTGX 1294
P P P N P G P PG PG P + G +G
Sbjct: 139 PGPAGAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQ 198
Query: 1293 PXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVPXXPTXXGQ-GXP 1120
G P P G P A G GP P PG G P P GQ G P
Sbjct: 199 RSRGLPGPSGRPGPQGPPGAP---GQPGSGSTPGPAGPPGPPGPNGQPGHPGQDGQPGAP 255
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein 33
protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.53
Identities = 38/136 (27%), Positives = 39/136 (28%), Gaps = 9/136 (6%)
Frame = -1
Query: 1500 PXXAGXRG--GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPX--PGPGA 1333
P AG G G P P P P PG P+ P P P PGP
Sbjct: 107 PGPAGPAGAPGNPGRPGK-PGAPGLPGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGPPG 165
Query: 1332 RPLSXXXGGXTGXPX----EGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG 1165
P G G P G P P P G P A G P P
Sbjct: 166 APGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAPGEPGRPGDDAPSEPLIPGEPGP 225
Query: 1164 GGVPXXPTXXG-QGXP 1120
G P P G G P
Sbjct: 226 QGPPGPPGQAGPDGQP 241
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 33.1 bits (72), Expect = 0.53
Identities = 40/133 (30%), Positives = 41/133 (30%), Gaps = 6/133 (4%)
Frame = +2
Query: 1121 GXPWPXKVGXXGTPPPGXAXGXXGPXXR-XXPXVFQXQCAXGXP----XGXLGGXGSXXP 1285
G P P G G+PPP G GP P G P GG G P
Sbjct: 199 GVPGPD--GDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGP 256
Query: 1286 SXGXPVXPPXXXXRGRAPGPGXGXXXPGXXXGXXREXAXLRGP-XPGGXGAXXFXGXXXG 1462
P PP G A PG P G GP PGG G G
Sbjct: 257 P--GPPGPPGQDGSGGAAQPG-----PPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAA 309
Query: 1463 XGGXPPRXPAXXG 1501
PPR PA G
Sbjct: 310 YCPCPPRTPAGGG 322
Score = 32.3 bits (70), Expect = 0.93
Identities = 35/140 (25%), Positives = 37/140 (26%), Gaps = 7/140 (5%)
Frame = +2
Query: 1121 GXPWPXKVGXXGTP----PPGXAXGXXGPXXRXXPXVFQXQCAXGXPXGXLGGXGSXXPS 1288
G P G G P PG GP P C GG G P+
Sbjct: 270 GAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPRTPAGGGGGGDFPA 329
Query: 1289 XGXPVXPPXXXXRGRAPGPGXGXXXPGXXXGXXREXAXLRGPXPGGXGAXXFXG---XXX 1459
G G + G G G G G G GG G G
Sbjct: 330 GGG--------GGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGG 381
Query: 1460 GXGGXPPRXPAXXGXPXXXA 1519
G GG P PA P A
Sbjct: 382 GGGGAPQAAPAPQAAPAPAA 401
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical protein
W05B2.6 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.93
Identities = 34/126 (26%), Positives = 36/126 (28%), Gaps = 12/126 (9%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
P P P AP P G + PG P PGA P + G G P
Sbjct: 154 PQGPAGAPG---APGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGA-PGNPGQAGAPGQP 209
Query: 1290 -----------XEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGG-GVPXX 1147
G P P P G P A G GP PG G P
Sbjct: 210 GSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGPGQAGAPGPKGPSGAPGQPGADGNPGA 269
Query: 1146 PTXXGQ 1129
P GQ
Sbjct: 270 PGQPGQ 275
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical protein
W05B2.5 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.93
Identities = 34/126 (26%), Positives = 36/126 (28%), Gaps = 12/126 (9%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
P P P AP P G + PG P PGA P + G G P
Sbjct: 154 PQGPAGAPG---APGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGA-PGNPGQAGAPGQP 209
Query: 1290 -----------XEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGG-GVPXX 1147
G P P P G P A G GP PG G P
Sbjct: 210 GSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGPGQAGAPGPKGPSGAPGQPGADGNPGA 269
Query: 1146 PTXXGQ 1129
P GQ
Sbjct: 270 PGQPGQ 275
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical protein
W05B2.1 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.93
Identities = 34/126 (26%), Positives = 36/126 (28%), Gaps = 12/126 (9%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
P P P AP P G + PG P PGA P + G G P
Sbjct: 154 PQGPAGAPG---APGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGA-PGNPGQAGAPGQP 209
Query: 1290 -----------XEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGG-GVPXX 1147
G P P P G P A G GP PG G P
Sbjct: 210 GSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGPGQAGAPGPKGPSGAPGQPGADGNPGA 269
Query: 1146 PTXXGQ 1129
P GQ
Sbjct: 270 PGQPGQ 275
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 32.3 bits (70), Expect = 0.93
Identities = 39/133 (29%), Positives = 43/133 (32%), Gaps = 7/133 (5%)
Frame = -1
Query: 1506 GXPXXAGXRG--GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGA 1333
G P G +G G P P N AP PPG L P G PGP A
Sbjct: 341 GYPGRDGPKGNSGPPGPPGGGTFNDGAPGPPG---LPGRPGNPGPPGTDGYPG-APGP-A 395
Query: 1332 RPLSXXXG-GXTGXP-XEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXP---XAXP 1168
P+ G G G P EG P G P A G GP P
Sbjct: 396 GPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTP 455
Query: 1167 GGGVPXXPTXXGQ 1129
G +P P G+
Sbjct: 456 GQSIPGLPGKDGK 468
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 32.3 bits (70), Expect = 0.93
Identities = 39/133 (29%), Positives = 43/133 (32%), Gaps = 7/133 (5%)
Frame = -1
Query: 1506 GXPXXAGXRG--GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGA 1333
G P G +G G P P N AP PPG L P G PGP A
Sbjct: 340 GYPGRDGPKGNSGPPGPPGGGTFNDGAPGPPG---LPGRPGNPGPPGTDGYPG-APGP-A 394
Query: 1332 RPLSXXXG-GXTGXP-XEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXP---XAXP 1168
P+ G G G P EG P G P A G GP P
Sbjct: 395 GPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTP 454
Query: 1167 GGGVPXXPTXXGQ 1129
G +P P G+
Sbjct: 455 GQSIPGLPGKDGK 467
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein 20
protein.
Length = 288
Score = 32.3 bits (70), Expect = 0.93
Identities = 28/108 (25%), Positives = 29/108 (26%), Gaps = 2/108 (1%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
P P P P PPG R P PG GP G G P
Sbjct: 148 PAGPAGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPG----GPQGEAGEDGGAGNPGTP 203
Query: 1290 XEGXXXPXPPNXPX--GXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVP 1153
+ P PP P G P G G P PG P
Sbjct: 204 GQVRSLPSPPGEPGQPGEPGGPGEPGADGRPGHPGRAGPPGPPGDNGP 251
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 32.3 bits (70), Expect = 0.93
Identities = 39/133 (29%), Positives = 43/133 (32%), Gaps = 7/133 (5%)
Frame = -1
Query: 1506 GXPXXAGXRG--GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGA 1333
G P G +G G P P N AP PPG L P G PGP A
Sbjct: 340 GYPGRDGPKGNSGPPGPPGGGTFNDGAPGPPG---LPGRPGNPGPPGTDGYPG-APGP-A 394
Query: 1332 RPLSXXXG-GXTGXP-XEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXP---XAXP 1168
P+ G G G P EG P G P A G GP P
Sbjct: 395 GPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTP 454
Query: 1167 GGGVPXXPTXXGQ 1129
G +P P G+
Sbjct: 455 GQSIPGLPGKDGK 467
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 32.3 bits (70), Expect = 0.93
Identities = 39/133 (29%), Positives = 43/133 (32%), Gaps = 7/133 (5%)
Frame = -1
Query: 1506 GXPXXAGXRG--GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGA 1333
G P G +G G P P N AP PPG L P G PGP A
Sbjct: 341 GYPGRDGPKGNSGPPGPPGGGTFNDGAPGPPG---LPGRPGNPGPPGTDGYPG-APGP-A 395
Query: 1332 RPLSXXXG-GXTGXP-XEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXP---XAXP 1168
P+ G G G P EG P G P A G GP P
Sbjct: 396 GPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTP 455
Query: 1167 GGGVPXXPTXXGQ 1129
G +P P G+
Sbjct: 456 GQSIPGLPGKDGK 468
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 32.3 bits (70), Expect = 0.93
Identities = 39/133 (29%), Positives = 43/133 (32%), Gaps = 7/133 (5%)
Frame = -1
Query: 1506 GXPXXAGXRG--GXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGA 1333
G P G +G G P P N AP PPG L P G PGP A
Sbjct: 377 GYPGRDGPKGNSGPPGPPGGGTFNDGAPGPPG---LPGRPGNPGPPGTDGYPG-APGP-A 431
Query: 1332 RPLSXXXG-GXTGXP-XEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXP---XAXP 1168
P+ G G G P EG P G P A G GP P
Sbjct: 432 GPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTP 491
Query: 1167 GGGVPXXPTXXGQ 1129
G +P P G+
Sbjct: 492 GQSIPGLPGKDGK 504
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 31.9 bits (69), Expect = 1.2
Identities = 31/119 (26%), Positives = 34/119 (28%), Gaps = 5/119 (4%)
Frame = -1
Query: 1461 PXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPG--ARPLSXXXGGXTGXPX 1288
P P AP G A + PG P PG +P S G G P
Sbjct: 209 PAGPPGPSGAPGQKGPSGAPGAPGQSGGSALPGPPGPAGSPGRSGQPGSNGNVGAPGAPG 268
Query: 1287 EGXXXPXPPN--XPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXPTXXG-QGXP 1120
+ P P P G P G P P G P P G QG P
Sbjct: 269 QVVDVPGAPGPAGPPGPPGPSGAPGHPGQAGSSLPGAPGPQGDAGAPGQPGAPGQQGEP 327
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 1.2
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 5/88 (5%)
Frame = -1
Query: 1488 GXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXX-----PGXXXPXPGPGARPL 1324
G RG P P P P G PL + S P P P P P P
Sbjct: 224 GFRGKRQAPPAGSPPP--PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 281
Query: 1323 SXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
GG P G P PP P G P
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPP--PRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 1.2
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 5/88 (5%)
Frame = -1
Query: 1488 GXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXX-----PGXXXPXPGPGARPL 1324
G RG P P P P G PL + S P P P P P P
Sbjct: 245 GFRGKRQAPPAGSPPP--PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 302
Query: 1323 SXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
GG P G P PP P G P
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPP--PRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 1.2
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 5/88 (5%)
Frame = -1
Query: 1488 GXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXX-----PGXXXPXPGPGARPL 1324
G RG P P P P G PL + S P P P P P P
Sbjct: 230 GFRGKRQAPPAGSPPP--PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 287
Query: 1323 SXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
GG P G P PP P G P
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPP--PRGSP 313
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein 34
protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.6
Identities = 36/128 (28%), Positives = 40/128 (31%), Gaps = 11/128 (8%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
PP P P + P PG A PG P PGP P + G G P
Sbjct: 155 PPGPPGPPGDSGEPGSPGLPGQDAAPGE------PGPKGP-PGPPGAPGAPGTPGEPGVP 207
Query: 1290 XEGX----XXPXP-----PNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGG-GVPXXPT 1141
+ P P P P G P + G GP P PG G P P
Sbjct: 208 AQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPG 267
Query: 1140 XXG-QGXP 1120
G G P
Sbjct: 268 PAGPPGSP 275
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular collagen
RAM-4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.6
Identities = 36/128 (28%), Positives = 40/128 (31%), Gaps = 11/128 (8%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXTGXP 1291
PP P P + P PG A PG P PGP P + G G P
Sbjct: 155 PPGPPGPPGDSGEPGSPGLPGQDAAPGE------PGPKGP-PGPPGAPGAPGTPGEPGVP 207
Query: 1290 XEGX----XXPXP-----PNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGG-GVPXXPT 1141
+ P P P P G P + G GP P PG G P P
Sbjct: 208 AQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPG 267
Query: 1140 XXG-QGXP 1120
G G P
Sbjct: 268 PAGPPGSP 275
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 31.5 bits (68), Expect = 1.6
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Frame = -1
Query: 1431 PXPPGXGPLXXAXSRXXPXXXPGXXXPX--PGPGARPLSXXXGGXTGXPXE---GXXXPX 1267
P PPG + R PG P PGP +P G G P G P
Sbjct: 151 PGPPGQDGIPGNPGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPP 210
Query: 1266 PPNXPXGXPXA 1234
P+ P G P A
Sbjct: 211 GPSGPPGRPGA 221
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/114 (26%), Positives = 32/114 (28%), Gaps = 5/114 (4%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPG--XXXPXPGPGARPLSXXXGG--X 1303
PP P P + PG A P PG PGP P +
Sbjct: 152 PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLT 211
Query: 1302 TGXPXE-GXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXP 1144
G P E G P P P G P G GP P G P P
Sbjct: 212 PGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGP 265
Score = 29.1 bits (62), Expect = 8.7
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXP--XPGPGA 1333
G P +G G PP P P N P PPG A P G P PGP
Sbjct: 216 GEPGDSGPPG--PPGPPGAPGNDGPPGPPGP---KGAPGPDGPPGADGQSGPPGPPGPAG 270
Query: 1332 RP 1327
P
Sbjct: 271 TP 272
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 1 (col-1) gene, complete cds. ).
Length = 296
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/114 (26%), Positives = 32/114 (28%), Gaps = 5/114 (4%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPG--XXXPXPGPGARPLSXXXGG--X 1303
PP P P + PG A P PG PGP P +
Sbjct: 152 PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLT 211
Query: 1302 TGXPXE-GXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXP 1144
G P E G P P P G P G GP P G P P
Sbjct: 212 PGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGP 265
Score = 29.1 bits (62), Expect = 8.7
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXP--XPGPGA 1333
G P +G G PP P P N P PPG A P G P PGP
Sbjct: 216 GEPGDSGPPG--PPGPPGAPGNDGPPGPPGP---KGAPGPDGPPGADGQSGPPGPPGPAG 270
Query: 1332 RP 1327
P
Sbjct: 271 TP 272
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/121 (24%), Positives = 32/121 (26%), Gaps = 8/121 (6%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGG----- 1306
P P P P P G + P PG P PG G
Sbjct: 179 PAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGAPGQVT 238
Query: 1305 -XTGXPX-EGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVPXXPTXX 1135
G P G P P P G P + G G P PG G P P
Sbjct: 239 ETPGTPGPAGAAGPPGPPGPAGNPGSAGA-SEPGPAGPAGDAGPDGAPGNAGAPGAPGEA 297
Query: 1134 G 1132
G
Sbjct: 298 G 298
Score = 29.1 bits (62), Expect = 8.7
Identities = 32/117 (27%), Positives = 33/117 (28%), Gaps = 4/117 (3%)
Frame = +2
Query: 1133 PXKVGXXGTPPPGXAXGXXGPXXRXXPXVFQXQCAXGXPXGXLGGXGSXXPSXGXPVXPP 1312
P G G P G G GP P G P G G G + G P P
Sbjct: 192 PGPAGADGNTPSGGGEGPAGPPGPPGPA--GNPGTDGAP-GNPGAPGQVTETPGTP-GPA 247
Query: 1313 XXXXRGRAPGPGXGXXXPGXXXGXXREXAXLRGP--XPGGXGAXXFXGXXX--GXGG 1471
PGP G A GP PG GA G G GG
Sbjct: 248 GAAGPPGPPGPAGNPGSAGASEPGPAGPAGDAGPDGAPGNAGAPGAPGEAGAPGSGG 304
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical protein
F23H12.4 protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.8
Identities = 30/114 (26%), Positives = 32/114 (28%), Gaps = 5/114 (4%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPG--XXXPXPGPGARPLSXXXGG--X 1303
PP P P + PG A P PG PGP P +
Sbjct: 157 PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLT 216
Query: 1302 TGXPXE-GXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPGGGVPXXP 1144
G P E G P P P G P G GP P G P P
Sbjct: 217 PGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGP 270
>U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical protein
C28C12.4 protein.
Length = 235
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 1328 GRAPGPGXGXXXPGXXXGXXREXAXLRGPXPGGXGAXXFXGXXXGXG 1468
G GPG PG G RE + G GG G G G G
Sbjct: 170 GGPGGPGGRRMGPGGRGGDSREGPMMGGMGRGGFGGQGMGGMGAGLG 216
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 2.8
Identities = 26/78 (33%), Positives = 27/78 (34%)
Frame = -1
Query: 1479 GGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXT 1300
GG PP P P P PP G L P G P P G P+S G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL--------PPITGGPPPPPPPGGLPPIS--GGPPP 760
Query: 1299 GXPXEGXXXPXPPNXPXG 1246
P G P PP P G
Sbjct: 761 PPPPPGGCPPPPPPPPPG 778
Score = 29.9 bits (64), Expect = 5.0
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
G P G PP P P PP G L P P P P P P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 1326 LSXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
GG P G P P P P
Sbjct: 778 -GGFKGGPPPPPPPGMFAPMAPVIPDYLP 805
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 2.8
Identities = 26/78 (33%), Positives = 27/78 (34%)
Frame = -1
Query: 1479 GGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXT 1300
GG PP P P P PP G L P G P P G P+S G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL--------PPITGGPPPPPPPGGLPPIS--GGPPP 760
Query: 1299 GXPXEGXXXPXPPNXPXG 1246
P G P PP P G
Sbjct: 761 PPPPPGGCPPPPPPPPPG 778
Score = 29.9 bits (64), Expect = 5.0
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
G P G PP P P PP G L P P P P P P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 1326 LSXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
GG P G P P P P
Sbjct: 778 -GGFKGGPPPPPPPGMFAPMAPVIPDYLP 805
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 2.8
Identities = 26/78 (33%), Positives = 27/78 (34%)
Frame = -1
Query: 1479 GGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXT 1300
GG PP P P P PP G L P G P P G P+S G
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGL--------PPITGGPPPPPPPGGLPPIS--GGPPP 343
Query: 1299 GXPXEGXXXPXPPNXPXG 1246
P G P PP P G
Sbjct: 344 PPPPPGGCPPPPPPPPPG 361
Score = 29.9 bits (64), Expect = 5.0
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
G P G PP P P PP G L P P P P P P
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Query: 1326 LSXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
GG P G P P P P
Sbjct: 361 -GGFKGGPPPPPPPGMFAPMAPVIPDYLP 388
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical protein
T21B4.2 protein.
Length = 312
Score = 30.3 bits (65), Expect = 3.8
Identities = 23/79 (29%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPX--PGPGARPLSXXXGGXTG 1297
PP P P N P PG A + PG P PGP P G G
Sbjct: 206 PPGPPGGPGNDGQPGGPGNPGAPGAVTEV-----PGQQGPPGPPGPAGPPGPAGNAGQAG 260
Query: 1296 XPXEGXXXPXPPNXPXGXP 1240
G P P G P
Sbjct: 261 YAQPGPAGPPGDAGPDGAP 279
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein 43
protein.
Length = 303
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -1
Query: 1506 GXPXXAGXRG-GXPPXPXXXPXNXXAPXPPG 1417
G P AG G PP P P N P PPG
Sbjct: 220 GAPGEAGDAGPAGPPGPPGAPGNDGPPGPPG 250
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 30.3 bits (65), Expect = 3.8
Identities = 31/127 (24%), Positives = 34/127 (26%), Gaps = 14/127 (11%)
Frame = -1
Query: 1470 PPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXP--XPGPGARPLSXXXGGXTG 1297
PP P P P PPG G P PG P + G G
Sbjct: 163 PPGPAGPPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDGAPGNPG 222
Query: 1296 XPXE-----------GXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGVP 1153
P + G P P P G P + G G P PG G P
Sbjct: 223 APGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGA-SEPGPAGPAGDAGPDGAPGNAGAP 281
Query: 1152 XXPTXXG 1132
P G
Sbjct: 282 GAPGEAG 288
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 3.8
Identities = 22/72 (30%), Positives = 24/72 (33%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARP 1327
G P G GG P P P + PP GP P PG P P G P
Sbjct: 398 GAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGP---GGFGPPPPGGPGAYGP-PPTGFPP 453
Query: 1326 LSXXXGGXTGXP 1291
+ G G P
Sbjct: 454 VGAPPPGAAGAP 465
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 30.3 bits (65), Expect = 3.8
Identities = 28/106 (26%), Positives = 31/106 (29%), Gaps = 2/106 (1%)
Frame = -1
Query: 1476 GXPPXPXXXPXNXXAPX-PPGXGPLXXAXSRXXPXXXPGXXXPXPGPGARPLSXXXGGXT 1300
G P P P P P G P G P PGP +P + G
Sbjct: 141 GEPGPPG--PEGPAGPAGPAGNAGADGEAGAEGPAGEAGPPGP-PGPDGKPGAAGSDGEA 197
Query: 1299 GXP-XEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG 1165
G P + P P P G P G GP P PG
Sbjct: 198 GAPGTKTTNAPGEPG-PAGPPGPPGPNGEAGAGSGPGPEGPAGPPG 242
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen protein.
Length = 303
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -1
Query: 1506 GXPXXAGXRG-GXPPXPXXXPXNXXAPXPPG 1417
G P AG G PP P P N P PPG
Sbjct: 220 GAPGEAGDAGPAGPPGPPGAPGNDGPPGPPG 250
>Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical protein
M195.1 protein.
Length = 304
Score = 29.9 bits (64), Expect = 5.0
Identities = 34/129 (26%), Positives = 37/129 (28%), Gaps = 3/129 (2%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPG--XXXPXPGPGA 1333
G P AG G P P N AP G A P PG PGP
Sbjct: 163 GPPGPAGNAG-----PKGAPGNAGAPGNDGQAGAPGAPGNDGPQGPPGQDGAAGQPGPDG 217
Query: 1332 RPLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG-GGV 1156
+P G P PP P G P + G GP P G G
Sbjct: 218 QP------GVVEEVAVPAGPPGPPG-PQGAPGTDGQPGSAGQPGQDGPQGPAGDAGTDGA 270
Query: 1155 PXXPTXXGQ 1129
P G+
Sbjct: 271 PGQAGAAGE 279
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical protein
C15A11.6 protein.
Length = 316
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/57 (29%), Positives = 21/57 (36%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXPXXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGPG 1336
G P +G RG P P P + P PG + + P PG P PG
Sbjct: 193 GSPGKSGQRGRGLPGPSGAPGSQGPPGAPGQ---PGSGNAPGPAGPPGPAGPNGQPG 246
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 29.5 bits (63), Expect = 6.6
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
Frame = +2
Query: 1298 PVXPPXXXXRGRAPGPGXGXXXPGXXXGXXREXAXLR--GPXPGGXGAXXFXGXXXGXGG 1471
P P R PGP G PG R A R P P G + G G
Sbjct: 154 PAGPAGDQGRHGPPGPTGGQGGPGEQGDAGRPGAAGRPGPPGPRGEPGTEYRPGQAGRAG 213
Query: 1472 XP-PRXP 1489
P PR P
Sbjct: 214 PPGPRGP 220
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.5 bits (63), Expect = 6.6
Identities = 30/96 (31%), Positives = 31/96 (32%), Gaps = 1/96 (1%)
Frame = +2
Query: 1142 VGXXGTPPPGXAXGXXG-PXXRXXPXVFQXQCAXGXPXGXLGGXGSXXPSXGXPVXPPXX 1318
VG G P P G G P P G P G GS P P PP
Sbjct: 217 VGAPGAPGPAGDAGSPGQPGAPGQP---------GRPGKNAQG-GSSRPGPPGPAGPPGP 266
Query: 1319 XXRGRAPGPGXGXXXPGXXXGXXREXAXLRGPXPGG 1426
APG G G PG R A + P P G
Sbjct: 267 PGNNGAPGGGYGVGPPGPPGPSGRPGAPGQ-PGPDG 301
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical protein
C29F4.1 protein.
Length = 299
Score = 29.1 bits (62), Expect = 8.7
Identities = 38/130 (29%), Positives = 39/130 (30%), Gaps = 5/130 (3%)
Frame = -1
Query: 1518 AXXXGXPXXAGXRG--GXPPXPXXXPXNXXAP-XPPGXGPLXXAXSRXXPXXXPGXXXPX 1348
A G P G G G P P P P PP P P PG P
Sbjct: 108 AGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAG-----PAGAPGPAGPA 162
Query: 1347 PGPGAR--PLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXA 1174
GA P + G G P G P PN G P A G P P A
Sbjct: 163 GDAGANGNPGAPGQDGQPGAP--GNKGPSGPNGNPGAPGAP---GQPGQDAPSEPITPGA 217
Query: 1173 XPGGGVPXXP 1144
PG P P
Sbjct: 218 -PGPAGPAGP 226
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical protein
T05A1.2 protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.7
Identities = 36/135 (26%), Positives = 38/135 (28%), Gaps = 6/135 (4%)
Frame = -1
Query: 1506 GXPXXAGXRGGXPPXP----XXXPXNXXAPXPPGXGPLXXAXSRXXPXXXPGXXXPXPGP 1339
G P G G P P P P PPG P PG P GP
Sbjct: 122 GAPGAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGP 181
Query: 1338 GARPLSXXXGGXTGXPXE-GXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXAXPG- 1165
G +P G G P + G P P P G GP P G
Sbjct: 182 G-QPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPKP----GQPGQPGRAGPRGPRGVAGI 236
Query: 1164 GGVPXXPTXXGQGXP 1120
G P GQ P
Sbjct: 237 KGKDGAPGSPGQPGP 251
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.6 protein.
Length = 299
Score = 29.1 bits (62), Expect = 8.7
Identities = 38/130 (29%), Positives = 39/130 (30%), Gaps = 5/130 (3%)
Frame = -1
Query: 1518 AXXXGXPXXAGXRG--GXPPXPXXXPXNXXAP-XPPGXGPLXXAXSRXXPXXXPGXXXPX 1348
A G P G G G P P P P PP P P PG P
Sbjct: 108 AGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAG-----PAGAPGPAGPA 162
Query: 1347 PGPGAR--PLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXA 1174
GA P + G G P G P PN G P A G P P A
Sbjct: 163 GDAGANGNPGAPGNDGQPGAP--GNKGPSGPNGNPGAPGAP---GQPGQDAPSEPITPGA 217
Query: 1173 XPGGGVPXXP 1144
PG P P
Sbjct: 218 -PGPAGPAGP 226
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 8.7
Identities = 38/130 (29%), Positives = 39/130 (30%), Gaps = 5/130 (3%)
Frame = -1
Query: 1518 AXXXGXPXXAGXRG--GXPPXPXXXPXNXXAP-XPPGXGPLXXAXSRXXPXXXPGXXXPX 1348
A G P G G G P P P P PP P P PG P
Sbjct: 108 AGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAG-----PAGAPGPAGPA 162
Query: 1347 PGPGAR--PLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXA 1174
GA P + G G P G P PN G P A G P P A
Sbjct: 163 GDAGANGNPGAPGNDGQPGAP--GNKGPSGPNGNPGAPGAP---GQPGQDAPSEPITPGA 217
Query: 1173 XPGGGVPXXP 1144
PG P P
Sbjct: 218 -PGPAGPAGP 226
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.1 bits (62), Expect = 8.7
Identities = 38/130 (29%), Positives = 39/130 (30%), Gaps = 5/130 (3%)
Frame = -1
Query: 1518 AXXXGXPXXAGXRG--GXPPXPXXXPXNXXAP-XPPGXGPLXXAXSRXXPXXXPGXXXPX 1348
A G P G G G P P P P PP P P PG P
Sbjct: 108 AGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAG-----PAGAPGPAGPA 162
Query: 1347 PGPGAR--PLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXA 1174
GA P + G G P G P PN G P A G P P A
Sbjct: 163 GDAGANGNPGAPGNDGQPGAP--GNKGPSGPNGNPGAPGAP---GQPGQDAPSEPITPGA 217
Query: 1173 XPGGGVPXXP 1144
PG P P
Sbjct: 218 -PGPAGPAGP 226
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.1 bits (62), Expect = 8.7
Identities = 38/130 (29%), Positives = 39/130 (30%), Gaps = 5/130 (3%)
Frame = -1
Query: 1518 AXXXGXPXXAGXRG--GXPPXPXXXPXNXXAP-XPPGXGPLXXAXSRXXPXXXPGXXXPX 1348
A G P G G G P P P P PP P P PG P
Sbjct: 108 AGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAG-----PAGAPGPAGPA 162
Query: 1347 PGPGAR--PLSXXXGGXTGXPXEGXXXPXPPNXPXGXPXAHWX*KTXGXXLXXGPXXPXA 1174
GA P + G G P G P PN G P A G P P A
Sbjct: 163 GDAGANGNPGAPGNDGQPGAP--GNKGPSGPNGNPGAPGAP---GQPGQDAPSEPITPGA 217
Query: 1173 XPGGGVPXXP 1144
PG P P
Sbjct: 218 -PGPAGPAGP 226
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 1347 PGPGARPLSXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
PG G P GG G P P PP P G P
Sbjct: 621 PGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisomerase
III protein.
Length = 759
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 1347 PGPGARPLSXXXGGXTGXPXEGXXXPXPPNXPXGXP 1240
PG G P GG G P P PP P G P
Sbjct: 621 PGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,651,221
Number of Sequences: 27780
Number of extensions: 523750
Number of successful extensions: 1338
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4379894956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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