Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_B01_e578_03.seq
         (1436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    33   0.007
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   2.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   2.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   3.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   7.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   9.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 32.7 bits (71), Expect = 0.007
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
 Frame = +2

Query: 185 RNLRYFYGRSRGHTASTFFSVCQRTFFFF*LFK-NYNVFSLRF*L*PTSEHYVIIINK*F 361
           R + YFY  S        F +C   F    LF   + +F++ F L     +Y  II    
Sbjct: 54  RRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFII---- 109

Query: 362 ITCFICFVYIFSFLLQYIK*LV*VYLFVKRLFF 460
           + C   F Y F     ++  L+ +Y FV  LFF
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFF 142



 Score = 31.1 bits (67), Expect = 0.021
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +1

Query: 232 YLFLCMSTNFLFFLVI*EL*CVFPKILIMTNERTLRYYNK*IIY--HVFYMFCIYIFISI 405
           Y F+  + + LF L I     V P   ++       +Y   II+  H+ ++ CIY F   
Sbjct: 118 YAFIIFTVHLLFLLCIYYF--VVPLFFLLC---IYYFYCAFIIFTVHLLFLLCIYHFFCA 172

Query: 406 TIYKVISISILICKTFIFF 462
            I  + ++ +L C  FIFF
Sbjct: 173 FI--IFTMHLLFCCAFIFF 189



 Score = 22.6 bits (46), Expect = 7.4
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +1

Query: 376 MFCIYIFISITIYKVISISILICKTFIFFI 465
           + CIY F    I   + + +L+C  + +++
Sbjct: 235 LLCIYYFYYAFILFTVHLLLLVCIYYFYYM 264


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -1

Query: 620 KQFLIYLVYLNKFKLYNNIFDL*ICTSHVNFHSTKNCHVLKRQNISLTFI 471
           K+ L  +  L+KF++Y  +  + I T H        C +L  +    T I
Sbjct: 647 KELLGVIFALHKFRIYIQVTKIIIRTDHQALKFLSRCRLLSERLTRWTLI 696


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +1

Query: 343 YNK*IIYHVFYMFCIYIFISITIYKVISISILICKTFIF 459
           +NK   +  +  F +++F  ITI  + S SIL+    +F
Sbjct: 61  FNKWNQFRSYSNFSVFLFDIITIVTLTSTSILLIVNAVF 99


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 17/85 (20%), Positives = 32/85 (37%)
 Frame = +3

Query: 45  GIPRAAGNSARG*TAILKIIVCLFRIISGTAGPILTGLFLVVTELLHVIYDTFMGAAAGT 224
           G P   G   +  T +     C +       G   T  F+V   LL   + T+ G     
Sbjct: 254 GFPIIIGCLIQFNTIVFSFCYCYYNSKMTKDGVYNTLFFIVYVSLLLGPHPTYFGKTGRK 313

Query: 225 LLVPFSLYVNELSFFFSYLRIIMCF 299
            ++  + Y N +  F+  + +I+ +
Sbjct: 314 TVLKTNKYCNFIILFYLSVFVILVY 338


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 514 FLVL*KLTWEVHIYKSKILLYNLNLFKYTK 603
           FL+  KL W V ++K++ L   +  F +T+
Sbjct: 442 FLIALKLVWIVALFKNENLSEMVKQFLFTQ 471



 Score = 22.2 bits (45), Expect = 9.7
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +1

Query: 367 VFYMFCIYIFISITIYKVISISILICKTFIFFILKINVNEIFCLFK 504
           V+  F I++      +   +I   +CK +  F++ + +  I  LFK
Sbjct: 411 VWKFFNIFLITPFYNFNENTIHSKLCKLYATFLIALKLVWIVALFK 456


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 367 VFYMFCIYIFISITIYKVISISILICKTFI 456
           VF++  I IF    +  +I + ILI KT +
Sbjct: 236 VFFLGSILIFFIFPLAILIIVYILIAKTLM 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,604
Number of Sequences: 336
Number of extensions: 5325
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 42813650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)