Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_B01_e578_03.seq
         (1436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF186024-1|AAF28462.1|  989|Drosophila melanogaster RAW protein.       31   3.9  
AE014134-1558|AAF52706.2|  989|Drosophila melanogaster CG12437-P...    31   3.9  

>AF186024-1|AAF28462.1|  989|Drosophila melanogaster RAW protein.
          Length = 989

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 678 SRITIHWPSFYNVXTGKTLALPNLIALQHIPLSPAGVIAKRPRTDRLXNSC 830
           S  + H+ ++  + +  T A+ +   L   PL+PAG++  RPRT  + N C
Sbjct: 133 SSASSHYRAYTTIRSNSTSAILHEAVLPP-PLTPAGMLYARPRTLNVHNVC 182


>AE014134-1558|AAF52706.2|  989|Drosophila melanogaster CG12437-PA,
           isoform A protein.
          Length = 989

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 678 SRITIHWPSFYNVXTGKTLALPNLIALQHIPLSPAGVIAKRPRTDRLXNSC 830
           S  + H+ ++  + +  T A+ +   L   PL+PAG++  RPRT  + N C
Sbjct: 133 SSASSHYRAYTTIRSNSTSAILHEAVLPP-PLTPAGMLYARPRTLNVHNVC 182


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,440,557
Number of Sequences: 53049
Number of extensions: 816319
Number of successful extensions: 1374
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7924821840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)