Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_B01_e578_03.seq
(1436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical pr... 34 0.22
Z70781-2|CAA94832.1| 396|Caenorhabditis elegans Hypothetical pr... 34 0.29
U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical p... 31 2.0
AF016668-8|AAZ91349.1| 296|Caenorhabditis elegans Serpentine re... 31 2.0
Z81030-3|CAB02707.1| 138|Caenorhabditis elegans Hypothetical pr... 30 3.5
AC006774-4|AAF60617.2| 313|Caenorhabditis elegans Serpentine re... 30 4.6
AC006774-3|AAW57825.1| 348|Caenorhabditis elegans Serpentine re... 30 4.6
Z70687-3|CAM35839.1| 332|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z68113-1|CAA92151.1| 321|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81030-17|CAB02706.2| 72|Caenorhabditis elegans Hypothetical p... 29 8.1
>Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical
protein T18D3.3 protein.
Length = 360
Score = 34.3 bits (75), Expect = 0.22
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 93 LKIIVCLFRIISGTAGPILTGLFLVVTELLHVIYDTFMGAAAGTLLVPFSLYV 251
L +++CLF ++ G +L G +VT+ H++ D A L+ FSLY+
Sbjct: 56 LTVVLCLFFMVCEVIGGVLAGSLAIVTDAAHLLTD-----FASVLISLFSLYI 103
>Z70781-2|CAA94832.1| 396|Caenorhabditis elegans Hypothetical
protein F57A8.4 protein.
Length = 396
Score = 33.9 bits (74), Expect = 0.29
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +1
Query: 259 FLFFLVI*EL*CVFPKILIMTNERTLRYYNK*IIYHVFYMFCIYIFISITIYKVISISIL 438
+L L + +L I T + Y+ +YH+++ + +++F + + S I+
Sbjct: 67 YLLLLAVLDLLMDLLYIPFFTVDALAIYHKNEFLYHIWHDYAMFVFGLSRLVQFASTYII 126
Query: 439 ICKTFIFFILKINVNEI-FCLFKT*QFLVL 525
+C T FI+ +N + F + T +F+ +
Sbjct: 127 LCATIERFIVVAEINSLDFLISSTGRFVTI 156
>U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical
protein C45G9.11 protein.
Length = 354
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 307 ILIMTNERTLRYYNK*IIYHVFYMFCIYIFISITIYKVISISILICKTFIFFILKINVNE 486
++ + R L ++K ++ H+ Y+FCI+ F + + SI L+ + F IN
Sbjct: 260 VIAIATARALVNFDKAVL-HIHYIFCIFSFFINFFFLIFSIWSLVSPGSLTF-TPINCLL 317
Query: 487 IFC 495
IFC
Sbjct: 318 IFC 320
>AF016668-8|AAZ91349.1| 296|Caenorhabditis elegans Serpentine
receptor, class t protein41 protein.
Length = 296
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -3
Query: 447 FTNKYTYTNYFIYCNRNENIYTKHIKHVINYLFIIIT*CSLVGH 316
FT+KY + + N+ + ++ H N LFI++ C+L G+
Sbjct: 135 FTSKYQAWFFDPFIYENKTLEYQNFPHTANNLFIVVATCALYGY 178
>Z81030-3|CAB02707.1| 138|Caenorhabditis elegans Hypothetical
protein C01G10.5 protein.
Length = 138
Score = 30.3 bits (65), Expect = 3.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 489 YFINIYF*NEKNKRFTNKYTYTNYFIYCNRNENIY 385
Y+ Y+ N N + YT Y+ Y N N N Y
Sbjct: 20 YYTYYYYPNNNNNGYNYNNGYTTYYYYPNNNNNGY 54
>AC006774-4|AAF60617.2| 313|Caenorhabditis elegans Serpentine
receptor, class t protein42, isoform a protein.
Length = 313
Score = 29.9 bits (64), Expect = 4.6
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -3
Query: 447 FTNKYTYTNYFIYCNRNENIYTKHIKHVINYLFIIIT*CSLVGH 316
FT++Y + + +N+ + ++ H N LFI++ C+L G+
Sbjct: 151 FTSRYQAWFFDPFIYQNKTLEYQNYPHTANNLFIVVATCALYGY 194
>AC006774-3|AAW57825.1| 348|Caenorhabditis elegans Serpentine
receptor, class t protein42, isoform b protein.
Length = 348
Score = 29.9 bits (64), Expect = 4.6
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -3
Query: 447 FTNKYTYTNYFIYCNRNENIYTKHIKHVINYLFIIIT*CSLVGH 316
FT++Y + + +N+ + ++ H N LFI++ C+L G+
Sbjct: 178 FTSRYQAWFFDPFIYQNKTLEYQNYPHTANNLFIVVATCALYGY 221
>Z70687-3|CAM35839.1| 332|Caenorhabditis elegans Hypothetical
protein T14C1.3 protein.
Length = 332
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -1
Query: 527 HSTKNCHVLKRQNISLTFIFKMKKINVLQISILILITLYIVIEMKIYIQNI 375
H K L+R NISL + MKK+++ +ITL +++ K +QNI
Sbjct: 226 HINKLLICLRRTNISLLNVVHMKKVSITD----KIITLDEIVKYKTALQNI 272
>Z68113-1|CAA92151.1| 321|Caenorhabditis elegans Hypothetical
protein E03G2.1 protein.
Length = 321
Score = 29.5 bits (63), Expect = 6.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 376 MFCIYIFISITIYKVISISILICKTFIFFILKINVNEIFCLFK 504
+FC YI+I I IY V + I I ++ K N+ IFCL +
Sbjct: 81 LFCAYIYIYIYIY-VYGLYIFIAQSHKQIFSKFNI--IFCLLE 120
>Z81030-17|CAB02706.2| 72|Caenorhabditis elegans Hypothetical
protein C01G10.4 protein.
Length = 72
Score = 29.1 bits (62), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 489 YFINIYF*NEKNKRFTNKYTYTNYFIYCNRNENIY 385
Y+ Y+ N N + N YT Y+ Y N N N Y
Sbjct: 20 YYTYYYYPNNNN--YNNNNGYTTYYYYPNNNNNGY 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,773,304
Number of Sequences: 27780
Number of extensions: 456695
Number of successful extensions: 1035
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4100231132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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