Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_A12_e665_02.seq
(1525 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 42 0.001
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 36 0.11
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 34 0.34
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 33 0.60
04_04_1088 - 30749392-30749424,30749671-30749760,30749870-307499... 33 0.79
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 32 1.0
03_05_0371 + 23570246-23570359,23570499-23570575,23570600-235706... 32 1.0
03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248 32 1.4
08_02_1068 - 24076662-24077231 31 2.4
05_05_0175 + 22966151-22967614 31 2.4
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 31 2.4
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 31 2.4
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 30 4.2
10_07_0139 + 13327851-13327880,13327999-13329049,13329089-133296... 30 5.5
12_01_0079 + 644754-645932,645966-646061,646193-647122 29 7.3
11_01_0078 + 609005-610183,610217-610312,610444-611373 29 7.3
08_01_0191 + 1590948-1591607,1591694-1592176,1592449-1592451,159... 29 9.7
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 29 9.7
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 29 9.7
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 41.9 bits (94), Expect = 0.001
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Frame = +3
Query: 27 QPPKKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRL 206
Q + D+ +RR T+ +E R S +K + E+ PKK +RRR + E RR
Sbjct: 248 QDSEDDERRKRRHATSEDDEPRKSQKEKKGQREDSEDDKPKKSRKDRRRHDSEDEEPRRK 307
Query: 207 QSPXKEDCNRRRXKTAIAEE----RRLXSPKXEYXTRR 308
++D +RR ++ RR PK + +RR
Sbjct: 308 HQRSEDDEPKRRQSEVSGDDEPRRRRQEMPKHDEYSRR 345
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 39 KDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPX 218
+D +R R+ + RL R++ELE R + ++ R R + A+ RR +P
Sbjct: 335 RDLRDRERERERERDRERLRERERERELERERERLRERRMKERERDRKHPADSRREHTPP 394
Query: 219 KEDCNRRRXKTAIAEE-RRLXSPKXE 293
+ +RRR + AE+ R SP+ +
Sbjct: 395 RTPGDRRRSSSVRAEKPLRRPSPRRD 420
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 33.9 bits (74), Expect = 0.34
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKK--TATAEERRLQ 209
K+ + RR+ EERR RK+ EE + + ++E+ R+R+K EE +
Sbjct: 481 KEREEEERRQREKEEEERRRQEEERKRREEEEKERREREEEERRQREKEEKKRREEEEQR 540
Query: 210 SPXKEDCNRRRXKTAIAEERRLXSPK 287
+E+ RR + E+ R PK
Sbjct: 541 REEEEEERRREEEEEEQEDGRGDEPK 566
Score = 31.5 bits (68), Expect = 1.8
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +1
Query: 82 KKEDYHQACGRRSWKKEDCNRRRKKTATAEERRLQPPKKEDCNRRXKKTAIAEEXRLQSP 261
K E+ + G + K+ + RR++ EERR Q +++ K+ EE +
Sbjct: 467 KAEEEEEGGGGKGEKEREEEERRQREKEEEERRRQEEERKRREEEEKERREREEEERRQR 526
Query: 262 KKEDCXRR 285
+KE+ RR
Sbjct: 527 EKEEKKRR 534
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 33.1 bits (72), Expect = 0.60
Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +3
Query: 42 DDCNRRRKMTATIEERR--LSSSLRKKELEERRLQPPK--KEDCNRRRKKTATAEERRLQ 209
D+C + I E+ ++ S++K +E + L+ P KED N +++ + + +
Sbjct: 466 DNCTVNLSVNKMISEKITCMNGSIKKDTVETKTLRVPSLVKEDVNLKKQNSENGQSSNIS 525
Query: 210 SPXKEDCNRRRXKTAIAE 263
+ ++ C++ T + E
Sbjct: 526 NAPQDQCSKSHSNTEVLE 543
>04_04_1088 -
30749392-30749424,30749671-30749760,30749870-30749933,
30750846-30751108
Length = 149
Score = 32.7 bits (71), Expect = 0.79
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 53 PPKKDDCNHRRKKIIIKPAEEGAGRKKTATAEERRLQPPKKEDCNRR 193
PP +D H R+K PAE+ AGR++ A A QP ++ RR
Sbjct: 31 PPINNDKTHHRQK---PPAEQEAGRQRAAAALAVHTQPSRRPAAIRR 74
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +3
Query: 108 RKKELEERRLQPPKKEDCNRRRKKTATAEE---RRLQSPXKEDCNRRRXKTAIAEERR 272
RK+E+ ++ ++++ RRR+ + T EE RRL+ ++ ++ R + IAE RR
Sbjct: 524 RKREIMKQEDDSDEEDNRKRRRRSSGTLEERKRRRLREKEEDLADKLREEEEIAEARR 581
>03_05_0371 +
23570246-23570359,23570499-23570575,23570600-23570675,
23570761-23570892,23570945-23571412,23571513-23571590,
23571693-23571809
Length = 353
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/84 (27%), Positives = 38/84 (45%)
Frame = +3
Query: 42 DDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXK 221
DD RR++ ++ L ++ EER + ++E+ R R+K +ER Q +
Sbjct: 191 DDPRPRRRLRTNLDNTNQIEDLERQLQEEREAREREREE--REREKERERQERE-QEKER 247
Query: 222 EDCNRRRXKTAIAEERRLXSPKXE 293
E R R K +ER L + E
Sbjct: 248 ECEERAREKEQDRKERELERKERE 271
>03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248
Length = 496
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/82 (25%), Positives = 30/82 (36%)
Frame = +2
Query: 53 PPKKDDCNHRRKKIIIKPAEEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEXRRLQ 232
PP++ RR A G GR + ATA PP + + +R
Sbjct: 161 PPQEPAKRRRRNTAAAATARRGRGRPRGATASSAHSAPPPPQQQQQPTTSAPAITAQRND 220
Query: 233 SPKXEDCNRRRKKIAXAEEXIL 298
ED N+ K AEE ++
Sbjct: 221 DVNQEDDNQSSKN--SAEEAVV 240
>08_02_1068 - 24076662-24077231
Length = 189
Score = 31.1 bits (67), Expect = 2.4
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +3
Query: 33 PKKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQS 212
P ++ RRR+M + E R S ++++L E Q NRR R
Sbjct: 75 PAAEEERRRRRMVSNRESARRSRMRKQRQLSELWAQVEHLRGANRRLLDELNRALRGCAD 134
Query: 213 PXKEDCNRRRXKTAIAEERRLXSPK 287
+E+ R K +A + +L P+
Sbjct: 135 VRRENSRLRDEKAELAGKLQLLLPR 159
>05_05_0175 + 22966151-22967614
Length = 487
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 6 TADER*LQPPKKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKK 179
+AD+R + P++ + ++ AT RR + SLR+ E+ QPP + + ++K
Sbjct: 235 SADKRPKKTPRRGARSSKQDEEATASARRRAQSLRRASGREQPKQPPPRHHVSTLQRK 292
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 33 PKKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPK-KEDCNRRRKKTATAEERRLQ 209
P + +++ +R+ + S R++ RR++ P+ + D R++TA + R
Sbjct: 243 PSAEKATKQQPRKPASPQRKPAPSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGG 302
Query: 210 SPXKEDCNRRRXKTAIAEERRLXSPK 287
+P + + R ++ RRL SP+
Sbjct: 303 TPSRRPGSPIRRRSPSPPPRRLRSPR 328
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 12 DER*LQPPKKDDCNRRRKMTATIE--ERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTA 185
DE + +K N K+ +E ERR+ L K+++ +R+ + +++ R ++
Sbjct: 146 DEDGSRVDRKRKHNEEAKIAKEVEAHERRIRKELEKQDMMKRKREEQMRKEMERHDRERR 205
Query: 186 TAEERRLQSPXKE 224
EER L+ +E
Sbjct: 206 KEEERLLRERQRE 218
Score = 30.7 bits (66), Expect = 3.2
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 61 ER*LQPSKKEDYHQACGRRSWKKEDCNRRRK--KTATAEERRLQPP-KKEDCNRRXKKTA 231
E L PS++ YH G R +K N K K A ERR++ +K+D +R ++
Sbjct: 133 ENSLLPSERRAYHDEDGSRVDRKRKHNEEAKIAKEVEAHERRIRKELEKQDMMKRKREEQ 192
Query: 232 IAEE 243
+ +E
Sbjct: 193 MRKE 196
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 30.3 bits (65), Expect = 4.2
Identities = 16/65 (24%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKE-DCNRRRKKTATAEERRLQS 212
++D + R+ +E ++ S ++KELE+++ + +KE D ++R++ A+E Q
Sbjct: 618 REDRKSARQLKHDELERKKRSQDEKRKELEKQKQEEERKELDRQKQREEERKAKELEKQK 677
Query: 213 PXKED 227
+E+
Sbjct: 678 QREEE 682
>10_07_0139 +
13327851-13327880,13327999-13329049,13329089-13329648,
13329757-13329904,13330935-13331024,13331148-13331208,
13331301-13331450,13331571-13331629,13332148-13332282,
13333028-13333119,13333210-13333278
Length = 814
Score = 29.9 bits (64), Expect = 5.5
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 96 SSSLRK-KELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKEDCNRRRXKTAIAEERR 272
S SLR + L R PKK C+ R T ++ + P K + ++ KTA + R
Sbjct: 311 SGSLRNLRSLSRRAKVEPKKAHCSDRISHKTTQDDMERKVPSKYIPSEKKGKTAESCSR- 369
Query: 273 LXSPKXE 293
SPK E
Sbjct: 370 --SPKRE 374
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 29.5 bits (63), Expect = 7.3
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELEERRL-------QPPKKEDCNRRRKKTATAE 194
++++ +R +M +EERR K E EER + P+KE RR+++ E
Sbjct: 232 EEEERKQREEMAKLVEERRRLRD-EKAEAEERSKGATPVGEKDPRKEVERRRQERRRKDE 290
Query: 195 ERRLQSPXKEDCNRRRXKTAIAEERRLXSPKXEYXTRR 308
+ + S DC + ER+ S + +R
Sbjct: 291 KDKGSSKSNSDCEDIERRVTREGERKRDSDRRNEPEKR 328
>11_01_0078 + 609005-610183,610217-610312,610444-611373
Length = 734
Score = 29.5 bits (63), Expect = 7.3
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELEERRL-------QPPKKEDCNRRRKKTATAE 194
++++ +R +M +EERR K E EER + P+KE RR+++ E
Sbjct: 232 EEEERKQREEMAKLVEERRRLRD-EKAEAEERSKGATPVGEKDPRKEVERRRQERRRKDE 290
Query: 195 ERRLQSPXKEDCNRRRXKTAIAEERRLXSPKXEYXTRR 308
+ + S DC + ER+ S + +R
Sbjct: 291 KDKGSSKSNSDCEDIERRVTREGERKRDSDRRNEPEKR 328
>08_01_0191 +
1590948-1591607,1591694-1592176,1592449-1592451,
1592555-1592992
Length = 527
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 76 PSKKEDYHQACGRRSWKKEDCNRRRKKTATAEERRL----QPPKKEDCNRRXKKTAIAEE 243
P E Y + S ++ED RRR+ EERR + ++E+ +RR + +I +E
Sbjct: 110 PGCPETYQETSSSSSQEQEDDERRRRGRRGDEERRRSSEGEEEEEEETSRRSFEQSIRDE 169
>03_05_0248 +
22348504-22348568,22349064-22349371,22349476-22350039,
22350082-22350128,22351244-22351715,22352349-22352611
Length = 572
Score = 29.1 bits (62), Expect = 9.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 59 KKDDCNHRRKKIIIKPAEEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEXRRLQSP 238
KK RKK I+ A EG ++ + EE K+ R RKK A +
Sbjct: 78 KKRAPRRGRKKATIQ-ASEGETQEGQVSTEEDESPEGTKKIKRRGRKKAATTASSSEEKD 136
Query: 239 KXEDCNRR-RKKIAXAEE 289
K ++ +R R+K+ EE
Sbjct: 137 KAKEPKKRGRRKVKTVEE 154
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 29.1 bits (62), Expect = 9.7
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +1
Query: 16 KDDCNRRRKMTATAEER*LQPSKKEDYHQACGR-RSWKKEDCNRR-RKKTATAEERRLQP 189
+DD RR K + + E R K D H+ + R + RR R + +E+ +
Sbjct: 49 RDDGERRSKRSRSEENRDRDKDKDRDRHRDRDKDRDRHRSSRERRDRDRDRDRDEKDREK 108
Query: 190 PKKEDCNRRXKKTAIAEEXRLQSPKKEDCXRRRXNTXLAE 309
+ +D RR + +E + ++ + R R + +E
Sbjct: 109 ERDKDKERRSRDREKEKEKEKEREREREKDRERRSRSRSE 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,401,666
Number of Sequences: 37544
Number of extensions: 195941
Number of successful extensions: 1223
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4896089576
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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